Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01007

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,045,738	+				+0.1
1,045,738	+				-0.7
1,045,738	+				+0.1
1,045,738	+				-0.7
1,045,738	+				-0.7
1,045,738	+				-0.6
1,045,738	+				-1.8
1,045,739	-				-0.8
1,045,739	-				-0.8
1,045,790	+				-0.6
1,045,790	+				+0.4
1,046,041	+		MPMX19_01005	0.41	+1.0
1,046,041	+		MPMX19_01005	0.41	-0.7
1,046,041	+		MPMX19_01005	0.41	-1.7
1,046,041	+		MPMX19_01005	0.41	-1.8
1,046,042	-		MPMX19_01005	0.41	-0.5
1,046,042	-		MPMX19_01005	0.41	-1.2
1,046,042	-		MPMX19_01005	0.41	+1.3
1,046,042	-		MPMX19_01005	0.41	+0.2
1,046,042	-		MPMX19_01005	0.41	-1.0
1,046,140	+		MPMX19_01005	0.65	-0.7
1,046,140	+		MPMX19_01005	0.65	-0.8
1,046,140	+		MPMX19_01005	0.65	-0.3
1,046,141	-		MPMX19_01005	0.66	+0.7
1,046,141	-		MPMX19_01005	0.66	-1.5
1,046,141	-		MPMX19_01005	0.66	+1.0
1,046,141	-		MPMX19_01005	0.66	-0.5
1,046,330	+		MPMX19_01006	0.25	+0.4
1,046,330	+		MPMX19_01006	0.25	-0.6
1,046,330	+		MPMX19_01006	0.25	+0.7
1,046,331	-		MPMX19_01006	0.25	-0.3
1,046,331	-		MPMX19_01006	0.25	-0.2
1,046,331	-		MPMX19_01006	0.25	-0.8
1,046,331	-		MPMX19_01006	0.25	-0.1
1,046,331	-		MPMX19_01006	0.25	-0.9
1,046,331	-		MPMX19_01006	0.25	-0.3
1,046,331	-		MPMX19_01006	0.25	-1.3
1,046,331	-		MPMX19_01006	0.25	+2.0
1,046,331	-		MPMX19_01006	0.25	+0.3
1,046,420	+		MPMX19_01006	0.76	-0.7
1,046,420	+		MPMX19_01006	0.76	+1.0
1,046,420	+		MPMX19_01006	0.76	+1.1
1,046,420	+		MPMX19_01006	0.76	+0.6
1,046,420	+		MPMX19_01006	0.76	-1.6
1,046,420	+		MPMX19_01006	0.76	-0.7
1,046,420	+		MPMX19_01006	0.76	+0.7
1,046,420	+		MPMX19_01006	0.76	-1.6
1,046,420	+		MPMX19_01006	0.76	-0.4
1,046,420	+		MPMX19_01006	0.76	-0.3
1,046,420	+		MPMX19_01006	0.76	+0.1
1,046,420	+		MPMX19_01006	0.76	-0.5
1,046,420	+		MPMX19_01006	0.76	-1.9
1,046,420	+		MPMX19_01006	0.76	+1.2
1,046,420	+		MPMX19_01006	0.76	-0.3
1,046,420	+		MPMX19_01006	0.76	+1.2
1,046,421	-		MPMX19_01006	0.77	-0.6
1,046,421	-		MPMX19_01006	0.77	-0.6
1,046,421	-		MPMX19_01006	0.77	+0.2
1,046,421	-		MPMX19_01006	0.77	+0.1
1,046,421	-		MPMX19_01006	0.77	-1.0
1,046,421	-		MPMX19_01006	0.77	-0.8
1,046,421	-		MPMX19_01006	0.77	-0.6
1,046,421	-		MPMX19_01006	0.77	-0.3
1,046,532	+				+1.0
1,046,532	+				+0.7
1,046,532	+				+1.2
1,046,533	-				-0.2
1,046,718	+		MPMX19_01007	0.18	-0.2
1,046,718	+		MPMX19_01007	0.18	-1.2
1,046,718	+		MPMX19_01007	0.18	+0.5
1,046,718	+		MPMX19_01007	0.18	-0.8
1,046,718	+		MPMX19_01007	0.18	-0.3
1,046,718	+		MPMX19_01007	0.18	-0.0
1,046,718	+		MPMX19_01007	0.18	-0.6
1,046,842	-		MPMX19_01007	0.27	-0.9
1,046,842	-		MPMX19_01007	0.27	-0.2
1,046,842	-		MPMX19_01007	0.27	-0.3
1,046,842	-		MPMX19_01007	0.27	-0.8
1,046,842	-		MPMX19_01007	0.27	-0.0
1,046,842	-		MPMX19_01007	0.27	-0.6
1,046,842	-		MPMX19_01007	0.27	-0.8
1,046,851	-		MPMX19_01007	0.28	-0.0
1,046,851	-		MPMX19_01007	0.28	-1.6
1,047,177	+		MPMX19_01007	0.53	+1.0
1,047,177	+		MPMX19_01007	0.53	-0.3
1,047,178	-		MPMX19_01007	0.53	-0.6
1,047,178	-		MPMX19_01007	0.53	+1.6
1,047,178	-		MPMX19_01007	0.53	-1.0
1,047,178	-		MPMX19_01007	0.53	-0.3
1,047,178	-		MPMX19_01007	0.53	+2.4
1,047,178	-		MPMX19_01007	0.53	+0.4
1,047,178	-		MPMX19_01007	0.53	+0.1
1,047,178	-		MPMX19_01007	0.53	-1.2
1,047,178	-		MPMX19_01007	0.53	-0.8
1,047,178	-		MPMX19_01007	0.53	-0.8
1,047,178	-		MPMX19_01007	0.53	-0.0
1,047,178	-		MPMX19_01007	0.53	+1.2
1,047,178	-		MPMX19_01007	0.53	-1.0
1,047,196	-		MPMX19_01007	0.54	-0.0
1,047,196	-		MPMX19_01007	0.54	+1.0
1,047,216	+		MPMX19_01007	0.56	+0.2
1,047,217	-		MPMX19_01007	0.56	+0.7
1,047,217	-		MPMX19_01007	0.56	-0.0
1,047,217	-		MPMX19_01007	0.56	+1.2
1,047,240	+		MPMX19_01007	0.58	-0.0
1,047,240	+		MPMX19_01007	0.58	+1.4
1,047,240	+		MPMX19_01007	0.58	+0.4
1,047,241	-		MPMX19_01007	0.58	-0.8
1,047,241	-		MPMX19_01007	0.58	-1.3
1,047,241	-		MPMX19_01007	0.58	+1.4
1,047,241	-		MPMX19_01007	0.58	-1.2
1,047,246	+		MPMX19_01007	0.58	-0.6
1,047,246	+		MPMX19_01007	0.58	-0.2
1,047,246	+		MPMX19_01007	0.58	+1.4
1,047,246	+		MPMX19_01007	0.58	-1.3
1,047,246	+		MPMX19_01007	0.58	+1.0
1,047,246	+		MPMX19_01007	0.58	+0.4
1,047,246	+		MPMX19_01007	0.58	-1.9
1,047,246	+		MPMX19_01007	0.58	-0.3
1,047,247	-		MPMX19_01007	0.58	-0.3
1,047,247	-		MPMX19_01007	0.58	-1.3
1,047,340	-		MPMX19_01007	0.65	-0.6
1,047,340	-		MPMX19_01007	0.65	+0.1
1,047,342	-		MPMX19_01007	0.65	-1.0
1,047,412	-		MPMX19_01007	0.71	-1.0
1,047,412	-		MPMX19_01007	0.71	-1.9
1,047,600	+		MPMX19_01007	0.85	+1.0
1,047,600	+		MPMX19_01007	0.85	-0.6
1,047,601	-		MPMX19_01007	0.85	-0.6
1,047,601	-		MPMX19_01007	0.85	-0.0
1,047,601	-		MPMX19_01007	0.85	-1.1
1,047,601	-		MPMX19_01007	0.85	-1.0
1,047,601	-		MPMX19_01007	0.85	-1.2
1,047,601	-		MPMX19_01007	0.85	+0.4
1,047,601	-		MPMX19_01007	0.85	+0.4
1,047,601	-		MPMX19_01007	0.85	+0.2
1,047,601	-		MPMX19_01007	0.85	-0.3
1,047,601	-		MPMX19_01007	0.85	+0.4
1,047,649	-		MPMX19_01007	0.89	-0.6
1,047,649	-		MPMX19_01007	0.89	+1.0
1,047,649	-		MPMX19_01007	0.89	+1.1
1,047,658	-		MPMX19_01007	0.89	-0.6
1,047,673	-				+1.0
1,047,673	-				-0.6
1,047,673	-				+1.0
1,047,749	-				-0.8
1,047,811	-				+0.2
1,047,811	-				+0.4
1,047,857	-				-0.1
1,047,857	-				-1.3
1,047,857	-				-0.3
1,047,857	-				+0.3
1,047,857	-				-0.0
1,047,857	-				-0.0
1,047,857	-				-0.0
1,047,857	-				-1.0
1,047,857	-				-1.3
1,047,857	-				+0.8
1,047,857	-				-0.8
1,047,857	-				-0.8
1,047,857	-				-0.4
1,047,857	-				-0.8
1,047,857	-				+0.6
1,047,857	-				+0.1
1,047,857	-				+0.2
1,047,857	-				+0.7
1,047,899	-				-0.0
1,047,899	-				-1.3