Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00988

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,029,286	-				-1.5
1,029,346	+				-0.9
1,029,346	+				-0.8
1,029,347	-				-1.0
1,029,461	+		MPMX19_00988	0.15	-0.1
1,029,461	+		MPMX19_00988	0.15	-0.5
1,029,461	+		MPMX19_00988	0.15	+0.6
1,029,461	+		MPMX19_00988	0.15	-0.6
1,029,461	+		MPMX19_00988	0.15	-0.4
1,029,461	+		MPMX19_00988	0.15	+0.4
1,029,462	-		MPMX19_00988	0.15	-1.4
1,029,462	-		MPMX19_00988	0.15	-1.1
1,029,462	-		MPMX19_00988	0.15	-1.3
1,029,462	-		MPMX19_00988	0.15	-0.8
1,029,487	+		MPMX19_00988	0.18	-1.3
1,029,487	+		MPMX19_00988	0.18	+0.7
1,029,487	+		MPMX19_00988	0.18	-0.7
1,029,487	+		MPMX19_00988	0.18	-0.6
1,029,487	+		MPMX19_00988	0.18	+0.0
1,029,487	+		MPMX19_00988	0.18	-0.0
1,029,487	+		MPMX19_00988	0.18	-1.3
1,029,488	-		MPMX19_00988	0.18	+0.2
1,029,488	-		MPMX19_00988	0.18	-0.2
1,029,488	-		MPMX19_00988	0.18	-2.3
1,029,488	-		MPMX19_00988	0.18	-0.1
1,029,488	-		MPMX19_00988	0.18	-1.1
1,029,488	-		MPMX19_00988	0.18	-0.6
1,029,488	-		MPMX19_00988	0.18	-1.6
1,029,499	+		MPMX19_00988	0.20	-2.5
1,029,499	+		MPMX19_00988	0.20	+0.4
1,029,499	+		MPMX19_00988	0.20	-1.7
1,029,499	+		MPMX19_00988	0.20	+0.7
1,029,499	+		MPMX19_00988	0.20	-1.8
1,029,499	+		MPMX19_00988	0.20	-1.1
1,029,499	+		MPMX19_00988	0.20	-0.6
1,029,499	+		MPMX19_00988	0.20	-0.2
1,029,499	+		MPMX19_00988	0.20	-1.5
1,029,499	+		MPMX19_00988	0.20	-0.6
1,029,499	+		MPMX19_00988	0.20	+1.2
1,029,499	+		MPMX19_00988	0.20	+0.2
1,029,499	+		MPMX19_00988	0.20	-0.3
1,029,499	+		MPMX19_00988	0.20	-1.9
1,029,499	+		MPMX19_00988	0.20	-1.0
1,029,499	+		MPMX19_00988	0.20	-1.4
1,029,499	+		MPMX19_00988	0.20	-2.4
1,029,499	+		MPMX19_00988	0.20	-0.8
1,029,499	+		MPMX19_00988	0.20	+0.4
1,029,499	+		MPMX19_00988	0.20	-1.7
1,029,499	+		MPMX19_00988	0.20	+1.0
1,029,499	+		MPMX19_00988	0.20	-0.8
1,029,499	+		MPMX19_00988	0.20	-0.7
1,029,499	+		MPMX19_00988	0.20	+1.7
1,029,499	+		MPMX19_00988	0.20	-1.4
1,029,499	+		MPMX19_00988	0.20	+0.1
1,029,499	+		MPMX19_00988	0.20	-1.3
1,029,499	+		MPMX19_00988	0.20	-0.8
1,029,499	+		MPMX19_00988	0.20	-2.9
1,029,499	+		MPMX19_00988	0.20	-1.9
1,029,499	+		MPMX19_00988	0.20	-1.3
1,029,499	+		MPMX19_00988	0.20	-0.8
1,029,499	+		MPMX19_00988	0.20	-0.7
1,029,499	+		MPMX19_00988	0.20	-1.0
1,029,499	+		MPMX19_00988	0.20	-0.5
1,029,499	+		MPMX19_00988	0.20	-0.0
1,029,499	+		MPMX19_00988	0.20	-1.6
1,029,499	+		MPMX19_00988	0.20	-0.4
1,029,500	-		MPMX19_00988	0.20	-0.3
1,029,500	-		MPMX19_00988	0.20	+0.1
1,029,500	-		MPMX19_00988	0.20	-0.3
1,029,500	-		MPMX19_00988	0.20	-0.8
1,029,500	-		MPMX19_00988	0.20	-0.8
1,029,500	-		MPMX19_00988	0.20	-0.5
1,029,500	-		MPMX19_00988	0.20	-0.3
1,029,500	-		MPMX19_00988	0.20	+0.5
1,029,500	-		MPMX19_00988	0.20	-0.3
1,029,500	-		MPMX19_00988	0.20	-0.5
1,029,500	-		MPMX19_00988	0.20	-0.2
1,029,500	-		MPMX19_00988	0.20	+0.4
1,029,500	-		MPMX19_00988	0.20	-0.9
1,029,500	-		MPMX19_00988	0.20	-1.2
1,029,500	-		MPMX19_00988	0.20	-1.5
1,029,500	-		MPMX19_00988	0.20	-1.7
1,029,500	-		MPMX19_00988	0.20	+0.6
1,029,500	-		MPMX19_00988	0.20	+0.1
1,029,500	-		MPMX19_00988	0.20	-0.7
1,029,500	-		MPMX19_00988	0.20	+1.1
1,029,500	-		MPMX19_00988	0.20	+0.8
1,029,500	-		MPMX19_00988	0.20	+0.5
1,029,500	-		MPMX19_00988	0.20	-0.8
1,029,500	-		MPMX19_00988	0.20	+0.7
1,029,500	-		MPMX19_00988	0.20	+0.5
1,029,500	-		MPMX19_00988	0.20	+0.4
1,029,500	-		MPMX19_00988	0.20	+0.6
1,029,500	-		MPMX19_00988	0.20	-1.3
1,029,500	-		MPMX19_00988	0.20	-0.9
1,029,500	-		MPMX19_00988	0.20	-1.0
1,029,500	-		MPMX19_00988	0.20	-0.3
1,029,500	-		MPMX19_00988	0.20	-2.0
1,029,500	-		MPMX19_00988	0.20	-1.0
1,029,500	-		MPMX19_00988	0.20	-0.8
1,029,500	-		MPMX19_00988	0.20	-1.5
1,029,500	-		MPMX19_00988	0.20	-1.3
1,029,500	-		MPMX19_00988	0.20	-0.7
1,029,632	+		MPMX19_00988	0.37	-0.3
1,029,632	+		MPMX19_00988	0.37	-1.4
1,029,632	+		MPMX19_00988	0.37	-0.0
1,029,632	+		MPMX19_00988	0.37	-0.8
1,029,632	+		MPMX19_00988	0.37	-0.2
1,029,632	+		MPMX19_00988	0.37	-0.6
1,029,632	+		MPMX19_00988	0.37	+0.5
1,029,632	+		MPMX19_00988	0.37	-0.3
1,029,633	-		MPMX19_00988	0.37	-0.0
1,029,633	-		MPMX19_00988	0.37	-0.9
1,029,633	-		MPMX19_00988	0.37	-0.5
1,029,633	-		MPMX19_00988	0.37	-1.3
1,029,633	-		MPMX19_00988	0.37	-1.0
1,029,878	+		MPMX19_00988	0.68	-1.0
1,029,878	+		MPMX19_00988	0.68	+0.4
1,029,878	+		MPMX19_00988	0.68	-0.2
1,029,878	+		MPMX19_00988	0.68	+0.1
1,029,878	+		MPMX19_00988	0.68	-0.2
1,029,878	+		MPMX19_00988	0.68	+0.3
1,029,878	+		MPMX19_00988	0.68	-1.0
1,029,878	+		MPMX19_00988	0.68	+0.8
1,029,878	+		MPMX19_00988	0.68	-0.6
1,029,878	+		MPMX19_00988	0.68	+0.8
1,029,878	+		MPMX19_00988	0.68	-0.0
1,029,878	+		MPMX19_00988	0.68	-1.4
1,029,878	+		MPMX19_00988	0.68	-1.0
1,029,878	+		MPMX19_00988	0.68	+0.3
1,029,878	+		MPMX19_00988	0.68	-1.2
1,029,878	+		MPMX19_00988	0.68	+1.1
1,029,878	+		MPMX19_00988	0.68	-0.7
1,029,878	+		MPMX19_00988	0.68	-0.8
1,029,878	+		MPMX19_00988	0.68	-1.1
1,029,878	+		MPMX19_00988	0.68	+0.6
1,029,878	+		MPMX19_00988	0.68	-0.8
1,029,878	+		MPMX19_00988	0.68	-0.5
1,029,878	+		MPMX19_00988	0.68	-0.9
1,029,878	+		MPMX19_00988	0.68	-0.6
1,029,878	+		MPMX19_00988	0.68	+0.7
1,029,878	+		MPMX19_00988	0.68	-2.4
1,029,878	+		MPMX19_00988	0.68	+0.2
1,029,878	+		MPMX19_00988	0.68	-1.1
1,029,878	+		MPMX19_00988	0.68	+0.4
1,029,878	+		MPMX19_00988	0.68	-1.5
1,029,878	+		MPMX19_00988	0.68	-1.1
1,029,878	+		MPMX19_00988	0.68	+1.0
1,029,878	+		MPMX19_00988	0.68	-1.2
1,029,878	+		MPMX19_00988	0.68	-0.5
1,029,878	+		MPMX19_00988	0.68	-0.4
1,029,879	-		MPMX19_00988	0.68	-0.1
1,029,879	-		MPMX19_00988	0.68	-0.7
1,029,879	-		MPMX19_00988	0.68	-0.6
1,029,879	-		MPMX19_00988	0.68	-0.1
1,029,879	-		MPMX19_00988	0.68	-0.8
1,029,879	-		MPMX19_00988	0.68	+1.3
1,029,879	-		MPMX19_00988	0.68	-1.3
1,029,879	-		MPMX19_00988	0.68	-2.7
1,029,879	-		MPMX19_00988	0.68	-0.1
1,029,879	-		MPMX19_00988	0.68	-1.0
1,029,879	-		MPMX19_00988	0.68	-0.2
1,029,879	-		MPMX19_00988	0.68	-1.2
1,029,879	-		MPMX19_00988	0.68	-0.8
1,029,879	-		MPMX19_00988	0.68	+0.6
1,029,879	-		MPMX19_00988	0.68	+0.2
1,029,879	-		MPMX19_00988	0.68	-0.1
1,029,879	-		MPMX19_00988	0.68	-0.2
1,029,879	-		MPMX19_00988	0.68	-0.6
1,029,879	-		MPMX19_00988	0.68	-0.7
1,029,879	-		MPMX19_00988	0.68	-1.0
1,029,879	-		MPMX19_00988	0.68	-0.2
1,029,879	-		MPMX19_00988	0.68	-1.2
1,029,879	-		MPMX19_00988	0.68	+0.4
1,029,879	-		MPMX19_00988	0.68	-0.5
1,029,879	-		MPMX19_00988	0.68	-0.1
1,029,879	-		MPMX19_00988	0.68	-1.5
1,029,879	-		MPMX19_00988	0.68	+0.1
1,029,879	-		MPMX19_00988	0.68	-1.0
1,029,879	-		MPMX19_00988	0.68	+0.8
1,029,879	-		MPMX19_00988	0.68	-0.3
1,029,879	-		MPMX19_00988	0.68	+0.1
1,029,879	-		MPMX19_00988	0.68	-1.0
1,029,879	-		MPMX19_00988	0.68	-0.7
1,029,879	-		MPMX19_00988	0.68	+0.8
1,029,879	-		MPMX19_00988	0.68	-0.9
1,029,879	-		MPMX19_00988	0.68	-2.6
1,029,879	-		MPMX19_00988	0.68	-1.3
1,029,879	-		MPMX19_00988	0.68	-1.9
1,029,879	-		MPMX19_00988	0.68	-0.7
1,029,879	-		MPMX19_00988	0.68	-0.7
1,029,880	+		MPMX19_00988	0.68	-0.2
1,029,880	+		MPMX19_00988	0.68	-0.7
1,029,880	+		MPMX19_00988	0.68	+0.2
1,029,880	+		MPMX19_00988	0.68	+0.3
1,029,880	+		MPMX19_00988	0.68	-1.8
1,029,880	+		MPMX19_00988	0.68	+1.1
1,029,880	+		MPMX19_00988	0.68	+0.7
1,029,880	+		MPMX19_00988	0.68	-0.1
1,029,880	+		MPMX19_00988	0.68	-0.2
1,029,881	-		MPMX19_00988	0.68	-1.4
1,029,881	-		MPMX19_00988	0.68	-0.5
1,029,881	-		MPMX19_00988	0.68	+0.7
1,029,881	-		MPMX19_00988	0.68	+0.0
1,029,881	-		MPMX19_00988	0.68	-1.7
1,029,881	-		MPMX19_00988	0.68	-0.9
1,029,881	-		MPMX19_00988	0.68	+1.6
1,029,881	-		MPMX19_00988	0.68	-2.3
1,029,881	-		MPMX19_00988	0.68	-2.0
1,029,990	-		MPMX19_00988	0.82	+0.3
1,029,990	-		MPMX19_00988	0.82	-1.1
1,029,990	-		MPMX19_00988	0.82	-2.1
1,029,990	-		MPMX19_00988	0.82	+0.4
1,029,990	-		MPMX19_00988	0.82	+0.3
1,030,075	+				+0.1
1,030,075	+				-1.5
1,030,075	+				+0.2
1,030,075	+				-1.2
1,030,075	+				-2.9
1,030,075	+				-1.9
1,030,075	+				-1.2
1,030,075	+				+0.7
1,030,075	+				-1.0
1,030,075	+				+0.2
1,030,075	+				-1.3
1,030,075	+				-0.5
1,030,075	+				-1.0
1,030,075	+				-1.0
1,030,075	+				+0.2
1,030,075	+				-1.0
1,030,075	+				-1.0
1,030,075	+				-0.3
1,030,075	+				-0.8
1,030,075	+				+0.2
1,030,075	+				-0.0
1,030,075	+				-1.3
1,030,076	-				+0.7
1,030,076	-				-0.1
1,030,076	-				-0.7
1,030,076	-				-0.7
1,030,076	-				+0.4
1,030,076	-				+1.3
1,030,076	-				-0.8
1,030,076	-				-1.6
1,030,076	-				+0.4
1,030,076	-				+1.2
1,030,076	-				-0.6
1,030,076	-				-0.7
1,030,076	-				-0.4
1,030,076	-				+0.4
1,030,076	-				+0.2
1,030,076	-				+0.4
1,030,076	-				-1.7
1,030,076	-				-1.0
1,030,076	-				-0.2
1,030,076	-				-1.0
1,030,076	-				-0.4
1,030,166	+				+0.1
1,030,166	+				-0.8
1,030,166	+				-1.3
1,030,166	+				-0.9
1,030,166	+				+2.6
1,030,166	+				-2.1
1,030,166	+				+0.5
1,030,166	+				-0.2
1,030,166	+				-0.2
1,030,166	+				-0.6
1,030,166	+				-1.6
1,030,166	+				-0.5
1,030,166	+				-0.1
1,030,166	+				-2.0
1,030,166	+				-1.1
1,030,166	+				+0.3
1,030,166	+				-0.5
1,030,167	-				+1.4
1,030,167	-				-1.2
1,030,167	-				+0.4
1,030,167	-				-1.2
1,030,167	-				-0.9
1,030,167	-				-1.2
1,030,167	-				+0.1
1,030,167	-				-0.4
1,030,167	-				+0.7
1,030,167	-				-0.8
1,030,167	-				-0.0
1,030,167	-				-0.8
1,030,167	-				-1.7
1,030,167	-				-1.2
1,030,167	-				+0.6
1,030,167	-				+0.0
1,030,167	-				-0.6
1,030,167	-				-1.3
1,030,173	+				-1.3
1,030,173	+				-2.4
1,030,173	+				+0.1
1,030,173	+				-0.9
1,030,173	+				-1.2
1,030,173	+				+0.4
1,030,173	+				-1.2
1,030,173	+				-0.9
1,030,173	+				-0.2
1,030,173	+				+0.8
1,030,173	+				-2.1
1,030,173	+				-1.9
1,030,174	-				-1.2
1,030,174	-				-2.3
1,030,174	-				-1.7
1,030,174	-				-3.2
1,030,174	-				-1.9
1,030,174	-				-0.1
1,030,174	-				-0.7
1,030,174	-				-2.2
1,030,174	-				-0.3
1,030,174	-				-2.7
1,030,174	-				-0.6
1,030,304	+				+1.2
1,030,304	+				-1.3
1,030,304	+				-0.6
1,030,304	+				-0.0
1,030,304	+				-0.1
1,030,304	+				-1.6
1,030,304	+				-0.3
1,030,304	+				-0.4
1,030,304	+				-1.0
1,030,305	-				-0.2
1,030,305	-				+0.4
1,030,305	-				-1.3
1,030,305	-				+0.3
1,030,394	+				+1.0
1,030,394	+				+0.2