Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00981 and MPMX19_00982 are separated by 15 nucleotides MPMX19_00982 and MPMX19_00983 are separated by 39 nucleotides MPMX19_00983 and MPMX19_00984 are separated by 112 nucleotides MPMX19_00984 and MPMX19_00985 are separated by 6 nucleotides
MPMX19_00981: MPMX19_00981 - hypothetical protein, at 1,021,116 to 1,021,847
_00981
MPMX19_00982: MPMX19_00982 - Guanylate kinase, at 1,021,863 to 1,022,510
_00982
MPMX19_00983: MPMX19_00983 - hypothetical protein, at 1,022,550 to 1,023,446
_00983
MPMX19_00984: MPMX19_00984 - putative oxidoreductase, at 1,023,559 to 1,024,320
_00984
MPMX19_00985: MPMX19_00985 - hypothetical protein, at 1,024,327 to 1,025,613
_00985
Position (kb) 1022
1023
1024 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1021.671 kb on + strand, within MPMX19_00981 at 1021.672 kb on - strand, within MPMX19_00981 at 1021.672 kb on - strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.764 kb on + strand, within MPMX19_00981 at 1021.765 kb on - strand, within MPMX19_00981 at 1021.820 kb on - strand at 1021.820 kb on - strand at 1021.845 kb on + strand at 1021.845 kb on + strand at 1021.845 kb on + strand at 1021.845 kb on + strand at 1021.845 kb on + strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.850 kb on - strand at 1021.865 kb on - strand at 1021.865 kb on - strand at 1021.872 kb on - strand at 1023.377 kb on - strand at 1023.377 kb on - strand at 1023.377 kb on - strand at 1023.377 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.492 kb on - strand at 1023.492 kb on - strand at 1023.492 kb on - strand at 1023.492 kb on - strand at 1023.492 kb on - strand at 1023.492 kb on - strand at 1023.628 kb on + strand at 1023.628 kb on + strand at 1023.628 kb on + strand at 1023.628 kb on + strand at 1023.628 kb on + strand at 1023.628 kb on + strand at 1023.628 kb on + strand at 1023.628 kb on + strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1024.012 kb on + strand, within MPMX19_00984 at 1024.012 kb on + strand, within MPMX19_00984 at 1024.012 kb on + strand, within MPMX19_00984 at 1024.012 kb on + strand, within MPMX19_00984 at 1024.013 kb on - strand, within MPMX19_00984 at 1024.013 kb on - strand, within MPMX19_00984 at 1024.013 kb on - strand, within MPMX19_00984 at 1024.013 kb on - strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.043 kb on - strand, within MPMX19_00984 at 1024.043 kb on - strand, within MPMX19_00984 at 1024.043 kb on - strand, within MPMX19_00984 at 1024.043 kb on - strand, within MPMX19_00984 at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 1,021,671 + MPMX19_00981 0.76 -0.0 1,021,672 - MPMX19_00981 0.76 -2.5 1,021,672 - MPMX19_00981 0.76 -0.8 1,021,761 + MPMX19_00981 0.88 +0.0 1,021,761 + MPMX19_00981 0.88 -0.5 1,021,761 + MPMX19_00981 0.88 -0.0 1,021,761 + MPMX19_00981 0.88 +0.2 1,021,761 + MPMX19_00981 0.88 -1.5 1,021,761 + MPMX19_00981 0.88 -1.9 1,021,761 + MPMX19_00981 0.88 -1.1 1,021,761 + MPMX19_00981 0.88 -1.3 1,021,761 + MPMX19_00981 0.88 -2.2 1,021,761 + MPMX19_00981 0.88 -0.5 1,021,761 + MPMX19_00981 0.88 -1.5 1,021,761 + MPMX19_00981 0.88 +2.0 1,021,762 - MPMX19_00981 0.88 -0.3 1,021,762 - MPMX19_00981 0.88 +0.1 1,021,762 - MPMX19_00981 0.88 -0.2 1,021,762 - MPMX19_00981 0.88 -0.6 1,021,762 - MPMX19_00981 0.88 -0.6 1,021,762 - MPMX19_00981 0.88 -0.5 1,021,762 - MPMX19_00981 0.88 -1.6 1,021,762 - MPMX19_00981 0.88 -0.9 1,021,762 - MPMX19_00981 0.88 -2.3 1,021,762 - MPMX19_00981 0.88 +0.5 1,021,762 - MPMX19_00981 0.88 -0.5 1,021,764 + MPMX19_00981 0.89 -0.8 1,021,765 - MPMX19_00981 0.89 -2.7 1,021,820 - -1.8 1,021,820 - -2.5 1,021,845 + -0.0 1,021,845 + +0.8 1,021,845 + -1.3 1,021,845 + -0.6 1,021,845 + -0.0 1,021,846 - +1.0 1,021,846 - -2.2 1,021,846 - -3.0 1,021,846 - -0.2 1,021,846 - -0.8 1,021,846 - -1.9 1,021,846 - +0.1 1,021,846 - -0.8 1,021,846 - -1.1 1,021,846 - +0.6 1,021,850 - -1.6 1,021,865 - -1.2 1,021,865 - +0.1 1,021,872 - -0.2 1,023,377 - -2.3 1,023,377 - -0.4 1,023,377 - -0.0 1,023,377 - -1.1 1,023,490 - -1.3 1,023,490 - +0.1 1,023,490 - -1.0 1,023,490 - -0.8 1,023,490 - -0.4 1,023,490 - -1.5 1,023,490 - +1.0 1,023,490 - -0.0 1,023,490 - -0.7 1,023,492 - -0.7 1,023,492 - -0.7 1,023,492 - +0.5 1,023,492 - +0.2 1,023,492 - -0.3 1,023,492 - +0.7 1,023,628 + -1.6 1,023,628 + -0.3 1,023,628 + +1.0 1,023,628 + -0.3 1,023,628 + +0.8 1,023,628 + -1.0 1,023,628 + -0.7 1,023,628 + +0.2 1,023,629 - +0.3 1,023,629 - +0.4 1,023,629 - -1.0 1,023,629 - -2.0 1,023,629 - -1.5 1,023,629 - +0.4 1,023,629 - -0.7 1,023,629 - -2.8 1,023,629 - -0.3 1,023,629 - -1.1 1,023,629 - -1.5 1,023,629 - -1.5 1,023,629 - -0.3 1,024,012 + MPMX19_00984 0.59 -0.2 1,024,012 + MPMX19_00984 0.59 -0.3 1,024,012 + MPMX19_00984 0.59 +0.2 1,024,012 + MPMX19_00984 0.59 -1.1 1,024,013 - MPMX19_00984 0.60 -0.4 1,024,013 - MPMX19_00984 0.60 -1.5 1,024,013 - MPMX19_00984 0.60 -1.0 1,024,013 - MPMX19_00984 0.60 -0.1 1,024,042 + MPMX19_00984 0.63 -0.1 1,024,042 + MPMX19_00984 0.63 -0.6 1,024,042 + MPMX19_00984 0.63 -0.6 1,024,042 + MPMX19_00984 0.63 -1.2 1,024,042 + MPMX19_00984 0.63 -0.6 1,024,042 + MPMX19_00984 0.63 -0.0 1,024,042 + MPMX19_00984 0.63 +0.1 1,024,042 + MPMX19_00984 0.63 -1.5 1,024,042 + MPMX19_00984 0.63 +0.8 1,024,042 + MPMX19_00984 0.63 +0.8 1,024,042 + MPMX19_00984 0.63 -1.3 1,024,043 - MPMX19_00984 0.64 +0.2 1,024,043 - MPMX19_00984 0.64 +0.1 1,024,043 - MPMX19_00984 0.64 -0.5 1,024,043 - MPMX19_00984 0.64 -0.6 1,024,433 + -0.0 1,024,433 + -0.5 1,024,433 + +1.0 1,024,433 + -0.9 1,024,433 + -0.5 1,024,433 + -0.3 1,024,433 + +0.6 1,024,433 + -0.0 1,024,433 + -0.6 1,024,433 + +1.6 1,024,433 + +0.8 1,024,433 + -0.3 1,024,433 + -0.1 1,024,433 + +0.5 1,024,433 + -1.2 1,024,433 + +1.0 1,024,433 + -0.3 1,024,433 + -1.9 1,024,433 + -0.8 1,024,433 + -0.6 1,024,434 - +0.6 1,024,434 - +0.4 1,024,434 - -1.2 1,024,434 - -0.8 1,024,434 - -1.9 1,024,434 - -0.8 1,024,434 - -1.1 1,024,434 - -1.1 1,024,434 - -0.3 1,024,434 - -0.5 1,024,434 - -2.5 1,024,434 - -0.0 1,024,434 - -0.6 1,024,434 - -0.8 1,024,434 - +0.2 1,024,434 - -0.7 1,024,434 - +1.7 1,024,434 - +0.8 1,024,434 - +0.9 1,024,434 - -0.7 1,024,434 - -2.5
Or see this region's nucleotide sequence