Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00971

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,009,904	+		MPMX19_00969	0.64	+0.3
1,009,904	+		MPMX19_00969	0.64	+0.4
1,009,904	+		MPMX19_00969	0.64	+1.0
1,009,904	+		MPMX19_00969	0.64	-1.3
1,009,904	+		MPMX19_00969	0.64	-0.3
1,009,904	+		MPMX19_00969	0.64	-0.6
1,009,904	+		MPMX19_00969	0.64	-0.5
1,009,904	+		MPMX19_00969	0.64	-0.3
1,009,904	+		MPMX19_00969	0.64	-0.5
1,009,904	+		MPMX19_00969	0.64	+0.8
1,009,904	+		MPMX19_00969	0.64	+0.4
1,009,904	+		MPMX19_00969	0.64	-0.3
1,009,905	-		MPMX19_00969	0.64	-0.6
1,009,905	-		MPMX19_00969	0.64	+1.1
1,009,905	-		MPMX19_00969	0.64	+0.7
1,009,905	-		MPMX19_00969	0.64	-1.2
1,009,917	-		MPMX19_00969	0.65	-0.0
1,009,934	+		MPMX19_00969	0.67	-1.0
1,009,934	+		MPMX19_00969	0.67	+0.2
1,009,934	+		MPMX19_00969	0.67	+0.2
1,009,934	+		MPMX19_00969	0.67	-1.2
1,009,934	+		MPMX19_00969	0.67	+0.7
1,009,934	+		MPMX19_00969	0.67	-0.5
1,009,934	+		MPMX19_00969	0.67	-1.7
1,009,934	+		MPMX19_00969	0.67	-0.5
1,009,934	+		MPMX19_00969	0.67	-1.5
1,009,934	+		MPMX19_00969	0.67	-0.0
1,009,934	+		MPMX19_00969	0.67	-1.3
1,009,934	+		MPMX19_00969	0.67	-0.8
1,009,935	-		MPMX19_00969	0.67	-0.2
1,009,935	-		MPMX19_00969	0.67	-0.0
1,009,935	-		MPMX19_00969	0.67	-0.6
1,009,935	-		MPMX19_00969	0.67	-0.2
1,009,935	-		MPMX19_00969	0.67	-1.3
1,009,935	-		MPMX19_00969	0.67	-0.5
1,009,935	-		MPMX19_00969	0.67	-1.7
1,009,935	-		MPMX19_00969	0.67	+2.0
1,009,935	-		MPMX19_00969	0.67	-0.1
1,009,935	-		MPMX19_00969	0.67	-0.7
1,009,935	-		MPMX19_00969	0.67	+1.0
1,009,935	-		MPMX19_00969	0.67	+1.3
1,009,935	-		MPMX19_00969	0.67	-0.6
1,009,935	-		MPMX19_00969	0.67	-1.0
1,009,935	-		MPMX19_00969	0.67	-1.5
1,009,935	-		MPMX19_00969	0.67	-1.0
1,009,935	-		MPMX19_00969	0.67	-0.0
1,009,935	-		MPMX19_00969	0.67	-1.9
1,009,935	-		MPMX19_00969	0.67	-0.0
1,009,935	-		MPMX19_00969	0.67	+1.1
1,009,935	-		MPMX19_00969	0.67	+0.5
1,009,935	-		MPMX19_00969	0.67	-0.2
1,009,935	-		MPMX19_00969	0.67	+0.4
1,009,935	-		MPMX19_00969	0.67	-1.0
1,009,935	-		MPMX19_00969	0.67	-1.6
1,010,063	+		MPMX19_00969	0.79	-1.3
1,010,063	+		MPMX19_00969	0.79	-1.8
1,010,063	+		MPMX19_00969	0.79	-0.8
1,010,063	+		MPMX19_00969	0.79	-1.1
1,010,063	+		MPMX19_00969	0.79	-0.7
1,010,063	+		MPMX19_00969	0.79	+0.3
1,010,063	+		MPMX19_00969	0.79	-1.7
1,010,064	-		MPMX19_00969	0.79	-1.4
1,010,064	-		MPMX19_00969	0.79	-1.8
1,010,064	-		MPMX19_00969	0.79	-0.3
1,010,064	-		MPMX19_00969	0.79	+1.4
1,010,064	-		MPMX19_00969	0.79	-0.5
1,010,064	-		MPMX19_00969	0.79	-0.2
1,010,064	-		MPMX19_00969	0.79	-0.3
1,010,064	-		MPMX19_00969	0.79	-0.8
1,010,064	-		MPMX19_00969	0.79	-0.5
1,010,064	-		MPMX19_00969	0.79	+1.4
1,010,064	-		MPMX19_00969	0.79	+0.1
1,010,064	-		MPMX19_00969	0.79	-0.6
1,010,087	+		MPMX19_00969	0.82	-1.2
1,010,087	+		MPMX19_00969	0.82	-0.1
1,010,087	+		MPMX19_00969	0.82	-1.0
1,010,087	+		MPMX19_00969	0.82	-1.1
1,010,087	+		MPMX19_00969	0.82	-0.3
1,010,087	+		MPMX19_00969	0.82	-0.3
1,010,087	+		MPMX19_00969	0.82	-0.1
1,010,088	-		MPMX19_00969	0.82	-1.7
1,010,088	-		MPMX19_00969	0.82	-0.3
1,010,088	-		MPMX19_00969	0.82	+1.6
1,010,088	-		MPMX19_00969	0.82	-0.0
1,010,088	-		MPMX19_00969	0.82	-1.6
1,010,088	-		MPMX19_00969	0.82	-1.5
1,010,088	-		MPMX19_00969	0.82	-0.1
1,010,088	-		MPMX19_00969	0.82	-0.0
1,010,088	-		MPMX19_00969	0.82	-1.0
1,010,088	-		MPMX19_00969	0.82	-3.1
1,010,088	-		MPMX19_00969	0.82	-1.3
1,010,120	+		MPMX19_00969	0.85	-0.6
1,010,120	+		MPMX19_00969	0.85	-0.7
1,010,120	+		MPMX19_00969	0.85	+0.2
1,010,120	+		MPMX19_00969	0.85	-0.9
1,010,120	+		MPMX19_00969	0.85	-0.0
1,010,120	+		MPMX19_00969	0.85	-1.8
1,010,120	+		MPMX19_00969	0.85	-1.0
1,010,120	+		MPMX19_00969	0.85	+0.8
1,010,120	+		MPMX19_00969	0.85	-0.3
1,010,120	+		MPMX19_00969	0.85	+1.0
1,010,120	+		MPMX19_00969	0.85	+0.3
1,010,120	+		MPMX19_00969	0.85	-0.5
1,010,121	-		MPMX19_00969	0.85	-0.1
1,010,121	-		MPMX19_00969	0.85	-0.3
1,010,121	-		MPMX19_00969	0.85	-0.3
1,010,121	-		MPMX19_00969	0.85	-2.0
1,010,121	-		MPMX19_00969	0.85	-1.3
1,010,121	-		MPMX19_00969	0.85	-1.6
1,010,121	-		MPMX19_00969	0.85	-1.3
1,010,121	-		MPMX19_00969	0.85	+1.0
1,010,121	-		MPMX19_00969	0.85	+0.2
1,010,121	-		MPMX19_00969	0.85	+0.7
1,010,228	+				-0.3
1,010,228	+				-1.2
1,010,228	+				+0.2
1,010,228	+				-1.5
1,010,228	+				-3.1
1,010,228	+				+0.7
1,010,228	+				+0.2
1,010,229	-				-0.8
1,010,229	-				-0.4
1,010,229	-				-0.3
1,010,229	-				+1.1
1,010,229	-				+0.7
1,010,229	-				+0.5
1,010,229	-				-0.3
1,010,229	-				-0.3
1,010,229	-				-0.1
1,010,240	+				-0.3
1,010,240	+				-0.6
1,010,240	+				-1.7
1,010,240	+				-0.1
1,010,240	+				+0.1
1,010,240	+				+0.4
1,010,240	+				-0.6
1,010,240	+				+0.2
1,010,240	+				-1.7
1,010,240	+				-1.0
1,010,241	-				-1.1
1,010,241	-				-1.1
1,010,241	-				-1.5
1,010,241	-				+1.0
1,010,241	-				+1.0
1,010,273	+				-0.9
1,010,273	+				-0.7
1,010,274	-				-1.0
1,010,274	-				+1.2
1,010,274	-				-0.5
1,010,274	-				-1.8
1,010,274	-				-0.2
1,010,274	-				-0.5
1,010,274	-				-0.6
1,010,274	-				-0.7
1,010,274	-				+0.6
1,010,274	-				-1.8
1,010,285	+				-0.5
1,010,285	+				-0.2
1,010,285	+				+0.4
1,010,286	-				+1.2
1,010,359	+				+0.3
1,010,359	+				+0.2
1,010,360	-				-0.2
1,010,360	-				-0.2
1,010,446	-				-1.2
1,010,515	+		MPMX19_00970	0.20	-0.8
1,010,515	+		MPMX19_00970	0.20	-0.5
1,010,515	+		MPMX19_00970	0.20	-0.4
1,010,515	+		MPMX19_00970	0.20	-1.3
1,010,515	+		MPMX19_00970	0.20	-0.6
1,010,515	+		MPMX19_00970	0.20	-0.1
1,010,515	+		MPMX19_00970	0.20	+0.5
1,010,515	+		MPMX19_00970	0.20	+0.1
1,010,515	+		MPMX19_00970	0.20	+0.4
1,010,515	+		MPMX19_00970	0.20	+0.4
1,010,516	-		MPMX19_00970	0.20	-0.5
1,010,516	-		MPMX19_00970	0.20	-1.5
1,010,516	-		MPMX19_00970	0.20	-1.3
1,010,516	-		MPMX19_00970	0.20	-1.2
1,010,516	-		MPMX19_00970	0.20	-0.3
1,010,516	-		MPMX19_00970	0.20	-0.3
1,010,869	+				-0.2
1,010,869	+				+0.1
1,010,869	+				-1.3
1,010,870	-				-0.9
1,010,870	-				-1.1
1,010,870	-				-0.6
1,010,870	-				-0.5
1,010,917	+		MPMX19_00971	0.12	-0.6
1,010,917	+		MPMX19_00971	0.12	-2.2
1,010,917	+		MPMX19_00971	0.12	-0.0
1,010,917	+		MPMX19_00971	0.12	-0.8
1,010,917	+		MPMX19_00971	0.12	+1.1
1,010,917	+		MPMX19_00971	0.12	+0.3
1,010,917	+		MPMX19_00971	0.12	-0.3
1,010,917	+		MPMX19_00971	0.12	+0.3
1,010,917	+		MPMX19_00971	0.12	+0.4
1,010,917	+		MPMX19_00971	0.12	-0.3
1,010,917	+		MPMX19_00971	0.12	-0.6
1,010,917	+		MPMX19_00971	0.12	+1.0
1,010,917	+		MPMX19_00971	0.12	-0.1
1,010,917	+		MPMX19_00971	0.12	+0.5
1,010,917	+		MPMX19_00971	0.12	+0.8
1,010,917	+		MPMX19_00971	0.12	-1.6
1,010,917	+		MPMX19_00971	0.12	-0.9
1,010,917	+		MPMX19_00971	0.12	-0.3
1,010,917	+		MPMX19_00971	0.12	-1.0
1,010,917	+		MPMX19_00971	0.12	+1.0
1,010,917	+		MPMX19_00971	0.12	+0.8
1,010,917	+		MPMX19_00971	0.12	+0.1
1,010,917	+		MPMX19_00971	0.12	-1.3
1,010,917	+		MPMX19_00971	0.12	+0.5
1,010,917	+		MPMX19_00971	0.12	-1.6
1,010,917	+		MPMX19_00971	0.12	-0.6
1,010,917	+		MPMX19_00971	0.12	-0.3
1,010,917	+		MPMX19_00971	0.12	-0.5
1,010,917	+		MPMX19_00971	0.12	-1.0
1,010,917	+		MPMX19_00971	0.12	-0.5
1,010,917	+		MPMX19_00971	0.12	-0.7
1,010,918	-		MPMX19_00971	0.13	-1.1
1,010,918	-		MPMX19_00971	0.13	-0.6
1,010,918	-		MPMX19_00971	0.13	-0.4
1,010,918	-		MPMX19_00971	0.13	+0.7
1,010,918	-		MPMX19_00971	0.13	-1.3
1,010,918	-		MPMX19_00971	0.13	-1.6
1,010,918	-		MPMX19_00971	0.13	+0.4
1,010,918	-		MPMX19_00971	0.13	+0.4
1,010,918	-		MPMX19_00971	0.13	+0.2
1,010,918	-		MPMX19_00971	0.13	-1.6
1,010,918	-		MPMX19_00971	0.13	+0.2
1,010,918	-		MPMX19_00971	0.13	-0.6
1,010,918	-		MPMX19_00971	0.13	-0.7
1,010,918	-		MPMX19_00971	0.13	-0.0
1,010,918	-		MPMX19_00971	0.13	-0.2
1,010,918	-		MPMX19_00971	0.13	+0.3
1,010,918	-		MPMX19_00971	0.13	-0.4
1,010,918	-		MPMX19_00971	0.13	-0.0
1,010,918	-		MPMX19_00971	0.13	-1.4
1,010,918	-		MPMX19_00971	0.13	-1.5
1,010,918	-		MPMX19_00971	0.13	-0.0
1,010,918	-		MPMX19_00971	0.13	-0.9
1,010,918	-		MPMX19_00971	0.13	+0.2
1,010,918	-		MPMX19_00971	0.13	+0.4
1,010,918	-		MPMX19_00971	0.13	-0.2
1,010,918	-		MPMX19_00971	0.13	-1.2
1,010,918	-		MPMX19_00971	0.13	+1.5
1,010,918	-		MPMX19_00971	0.13	-0.5
1,010,918	-		MPMX19_00971	0.13	-0.2
1,010,918	-		MPMX19_00971	0.13	-1.9
1,010,918	-		MPMX19_00971	0.13	-0.9
1,010,918	-		MPMX19_00971	0.13	-0.1
1,010,918	-		MPMX19_00971	0.13	-1.2
1,010,918	-		MPMX19_00971	0.13	-0.0
1,010,918	-		MPMX19_00971	0.13	-1.1
1,010,918	-		MPMX19_00971	0.13	-1.2
1,010,918	-		MPMX19_00971	0.13	-1.3
1,010,918	-		MPMX19_00971	0.13	-0.2
1,010,918	-		MPMX19_00971	0.13	-0.9
1,010,918	-		MPMX19_00971	0.13	+0.8
1,010,918	-		MPMX19_00971	0.13	-0.1
1,010,918	-		MPMX19_00971	0.13	-0.8
1,010,918	-		MPMX19_00971	0.13	-1.0
1,010,918	-		MPMX19_00971	0.13	-0.2
1,010,918	-		MPMX19_00971	0.13	-1.1
1,010,918	-		MPMX19_00971	0.13	+1.0
1,010,918	-		MPMX19_00971	0.13	-0.5
1,010,918	-		MPMX19_00971	0.13	-0.4
1,010,918	-		MPMX19_00971	0.13	-0.5
1,010,918	-		MPMX19_00971	0.13	+0.7
1,011,244	+				-1.0
1,011,244	+				+0.8
1,011,244	+				-0.3
1,011,244	+				-0.3
1,011,244	+				+1.3
1,011,244	+				+1.0
1,011,244	+				-0.2
1,011,244	+				-0.3
1,011,244	+				+0.2
1,011,244	+				+0.7
1,011,245	-				-0.1
1,011,245	-				-1.7
1,011,245	-				-0.3
1,011,245	-				+0.6
1,011,245	-				-0.2
1,011,245	-				-2.4
1,011,245	-				+0.5
1,011,245	-				-0.9
1,011,245	-				-0.2
1,011,245	-				+0.4
1,011,245	-				-1.6
1,011,245	-				-0.6
1,011,245	-				-1.1
1,011,245	-				-1.0
1,011,245	-				-2.3
1,011,245	-				+0.4
1,011,245	-				-0.2
1,011,245	-				-0.3
1,011,245	-				-1.5
1,011,245	-				-2.6
1,011,245	-				-1.5
1,011,245	-				-0.6
1,011,246	+				-0.8
1,011,246	+				-0.6
1,011,246	+				-0.8
1,011,246	+				+0.0
1,011,246	+				-0.0
1,011,246	+				-0.3
1,011,246	+				+0.2
1,011,246	+				-1.2
1,011,246	+				-0.0
1,011,246	+				-0.3
1,011,246	+				-0.4
1,011,246	+				-0.2
1,011,246	+				+0.3
1,011,246	+				-0.7
1,011,246	+				-0.6
1,011,247	-				-0.1
1,011,247	-				-1.6
1,011,247	-				-1.9
1,011,247	-				+1.1
1,011,247	-				+0.4
1,011,247	-				+2.4
1,011,247	-				+0.5
1,011,247	-				-0.8
1,011,247	-				-1.0
1,011,247	-				-0.0
1,011,247	-				-0.7
1,011,247	-				-0.8
1,011,247	-				-1.0
1,011,247	-				-0.8
1,011,247	-				-0.3
1,011,247	-				-0.9
1,011,247	-				+0.6
1,011,247	-				-1.3
1,011,247	-				-1.6
1,011,247	-				+0.5
1,011,316	+				-2.0
1,011,316	+				-1.7
1,011,316	+				+0.8
1,011,316	+				-0.4
1,011,316	+				-1.2
1,011,316	+				+0.4
1,011,316	+				+0.5
1,011,316	+				-0.1
1,011,316	+				-0.0
1,011,316	+				+0.8
1,011,316	+				-0.9
1,011,316	+				-1.2
1,011,316	+				-1.0
1,011,316	+				-1.2
1,011,317	-				-1.0
1,011,317	-				-1.0
1,011,317	-				+0.8
1,011,317	-				-1.0
1,011,317	-				-0.9
1,011,317	-				-2.3
1,011,317	-				-1.5
1,011,317	-				+0.2
1,011,317	-				+0.4
1,011,317	-				-0.2
1,011,317	-				-0.2
1,011,317	-				+0.1
1,011,317	-				-0.2
1,011,317	-				-0.3
1,011,318	+				-0.2
1,011,318	+				+0.5
1,011,318	+				+0.4
1,011,318	+				-0.3
1,011,318	+				-0.6
1,011,318	+				-0.0
1,011,318	+				-1.5
1,011,318	+				-1.1
1,011,318	+				-1.3
1,011,318	+				-0.4
1,011,318	+				+0.2
1,011,318	+				-1.2
1,011,318	+				+1.4
1,011,318	+				+0.4
1,011,319	-				+0.2
1,011,319	-				-1.2
1,011,319	-				-0.6
1,011,319	-				-0.1
1,011,319	-				-1.0
1,011,319	-				-2.3
1,011,319	-				-0.6
1,011,319	-				-0.1
1,011,319	-				-0.3
1,011,319	-				-1.9
1,011,319	-				-0.3
1,011,319	-				-1.5
1,011,319	-				-0.8
1,011,319	-				-1.5
1,011,360	+				-2.2
1,011,360	+				-1.2