Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00966

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,004,645	+				+1.0
1,004,645	+				+0.5
1,004,645	+				-0.7
1,004,645	+				-1.3
1,004,645	+				-0.4
1,004,645	+				-2.4
1,004,646	-				-1.3
1,004,763	+		MPMX19_00965	0.16	-1.4
1,004,763	+		MPMX19_00965	0.16	-0.2
1,004,764	-		MPMX19_00965	0.16	-0.8
1,004,764	-		MPMX19_00965	0.16	-0.1
1,004,764	-		MPMX19_00965	0.16	-0.8
1,004,764	-		MPMX19_00965	0.16	-1.4
1,004,926	-		MPMX19_00965	0.37	-0.3
1,004,926	-		MPMX19_00965	0.37	+1.7
1,004,926	-		MPMX19_00965	0.37	-1.0
1,004,973	+		MPMX19_00965	0.43	-0.1
1,004,973	+		MPMX19_00965	0.43	-1.0
1,004,973	+		MPMX19_00965	0.43	-0.6
1,004,973	+		MPMX19_00965	0.43	+0.4
1,004,973	+		MPMX19_00965	0.43	+1.4
1,004,973	+		MPMX19_00965	0.43	+0.1
1,004,973	+		MPMX19_00965	0.43	-0.8
1,004,973	+		MPMX19_00965	0.43	-0.1
1,004,973	+		MPMX19_00965	0.43	-1.2
1,004,973	+		MPMX19_00965	0.43	+0.3
1,004,973	+		MPMX19_00965	0.43	-0.0
1,004,973	+		MPMX19_00965	0.43	-0.7
1,004,973	+		MPMX19_00965	0.43	-0.6
1,004,973	+		MPMX19_00965	0.43	+0.3
1,004,973	+		MPMX19_00965	0.43	-0.9
1,004,973	+		MPMX19_00965	0.43	+1.0
1,004,973	+		MPMX19_00965	0.43	-1.2
1,004,974	-		MPMX19_00965	0.43	-0.1
1,004,974	-		MPMX19_00965	0.43	-0.6
1,004,974	-		MPMX19_00965	0.43	+0.6
1,004,974	-		MPMX19_00965	0.43	-0.2
1,004,974	-		MPMX19_00965	0.43	+0.4
1,004,974	-		MPMX19_00965	0.43	-1.2
1,004,974	-		MPMX19_00965	0.43	-0.3
1,004,974	-		MPMX19_00965	0.43	-0.5
1,004,974	-		MPMX19_00965	0.43	+0.6
1,004,974	-		MPMX19_00965	0.43	+1.2
1,004,974	-		MPMX19_00965	0.43	-0.6
1,004,974	-		MPMX19_00965	0.43	-0.4
1,004,974	-		MPMX19_00965	0.43	-0.5
1,004,974	-		MPMX19_00965	0.43	-1.0
1,004,974	-		MPMX19_00965	0.43	-0.8
1,004,974	-		MPMX19_00965	0.43	-0.6
1,004,974	-		MPMX19_00965	0.43	-1.1
1,004,974	-		MPMX19_00965	0.43	-0.3
1,004,979	+		MPMX19_00965	0.43	-0.3
1,004,980	-		MPMX19_00965	0.44	-0.8
1,004,980	-		MPMX19_00965	0.44	-1.0
1,005,024	+		MPMX19_00965	0.49	-0.8
1,005,024	+		MPMX19_00965	0.49	-0.2
1,005,024	+		MPMX19_00965	0.49	-0.6
1,005,024	+		MPMX19_00965	0.49	+0.1
1,005,024	+		MPMX19_00965	0.49	-2.2
1,005,024	+		MPMX19_00965	0.49	-0.3
1,005,024	+		MPMX19_00965	0.49	-0.1
1,005,024	+		MPMX19_00965	0.49	-0.2
1,005,024	+		MPMX19_00965	0.49	+1.1
1,005,024	+		MPMX19_00965	0.49	-1.8
1,005,024	+		MPMX19_00965	0.49	-1.2
1,005,024	+		MPMX19_00965	0.49	-1.0
1,005,024	+		MPMX19_00965	0.49	+0.7
1,005,025	-		MPMX19_00965	0.49	-0.6
1,005,025	-		MPMX19_00965	0.49	-0.5
1,005,025	-		MPMX19_00965	0.49	+0.7
1,005,025	-		MPMX19_00965	0.49	+0.1
1,005,025	-		MPMX19_00965	0.49	+0.4
1,005,025	-		MPMX19_00965	0.49	-0.5
1,005,025	-		MPMX19_00965	0.49	+0.4
1,005,025	-		MPMX19_00965	0.49	-0.3
1,005,025	-		MPMX19_00965	0.49	-0.9
1,005,025	-		MPMX19_00965	0.49	-0.4
1,005,025	-		MPMX19_00965	0.49	-1.5
1,005,175	-		MPMX19_00965	0.68	-0.8
1,005,175	-		MPMX19_00965	0.68	-1.0
1,005,282	+		MPMX19_00965	0.82	-0.9
1,005,282	+		MPMX19_00965	0.82	-0.9
1,005,282	+		MPMX19_00965	0.82	-0.5
1,005,282	+		MPMX19_00965	0.82	+0.7
1,005,282	+		MPMX19_00965	0.82	-0.1
1,005,283	-		MPMX19_00965	0.82	+0.8
1,005,283	-		MPMX19_00965	0.82	-1.9
1,005,283	-		MPMX19_00965	0.82	-0.8
1,005,283	-		MPMX19_00965	0.82	+0.4
1,005,283	-		MPMX19_00965	0.82	-0.4
1,005,283	-		MPMX19_00965	0.82	-1.3
1,005,283	-		MPMX19_00965	0.82	+0.0
1,005,297	+		MPMX19_00965	0.84	-0.6
1,005,297	+		MPMX19_00965	0.84	-0.3
1,005,297	+		MPMX19_00965	0.84	-1.3
1,005,297	+		MPMX19_00965	0.84	-0.7
1,005,297	+		MPMX19_00965	0.84	-1.0
1,005,298	-		MPMX19_00965	0.84	-0.8
1,005,298	-		MPMX19_00965	0.84	-0.2
1,005,298	-		MPMX19_00965	0.84	-0.8
1,005,298	-		MPMX19_00965	0.84	+0.1
1,005,298	-		MPMX19_00965	0.84	-1.0
1,005,441	+				+0.4
1,005,441	+				+0.7
1,005,441	+				-1.0
1,005,441	+				-0.0
1,005,441	+				-1.3
1,005,441	+				-1.8
1,005,441	+				+0.2
1,005,441	+				-0.8
1,005,442	-				-0.3
1,005,442	-				+1.6
1,005,442	-				-0.4
1,005,442	-				-0.0
1,005,442	-				-0.1
1,005,442	-				-0.6
1,005,455	+				+1.0
1,005,455	+				-1.3
1,005,455	+				-1.9
1,005,455	+				-0.1
1,005,455	+				+0.1
1,005,455	+				+1.0
1,005,456	-				-0.1
1,005,456	-				-0.6
1,005,456	-				-0.5
1,005,456	-				-0.3
1,005,456	-				-1.3
1,005,466	+				-1.0
1,005,466	+				-0.5
1,005,474	+				-0.5
1,005,507	+				-2.0
1,005,507	+				+0.7
1,005,508	-				-0.5
1,005,508	-				+0.1
1,005,519	+				-0.5
1,005,519	+				-1.3
1,005,519	+				-0.9
1,006,079	-		MPMX19_00966	0.29	-1.5
1,006,187	+		MPMX19_00966	0.35	+0.2
1,006,187	+		MPMX19_00966	0.35	-0.3
1,006,187	+		MPMX19_00966	0.35	-1.2
1,006,187	+		MPMX19_00966	0.35	-1.3
1,006,187	+		MPMX19_00966	0.35	+1.0
1,006,188	-		MPMX19_00966	0.35	-1.2
1,006,390	+		MPMX19_00966	0.47	-1.5
1,006,392	+		MPMX19_00966	0.47	+2.0
1,006,392	+		MPMX19_00966	0.47	+0.6
1,006,392	+		MPMX19_00966	0.47	-0.0
1,006,392	+		MPMX19_00966	0.47	-2.6
1,006,393	-		MPMX19_00966	0.47	+0.5
1,006,393	-		MPMX19_00966	0.47	-2.3
1,006,393	-		MPMX19_00966	0.47	-2.4
1,006,393	-		MPMX19_00966	0.47	+1.0
1,006,393	-		MPMX19_00966	0.47	-0.3
1,006,393	-		MPMX19_00966	0.47	-0.2
1,006,393	-		MPMX19_00966	0.47	-0.3
1,006,393	-		MPMX19_00966	0.47	-0.8
1,006,393	-		MPMX19_00966	0.47	+0.5
1,006,393	-		MPMX19_00966	0.47	-0.0
1,006,393	-		MPMX19_00966	0.47	-1.0
1,006,393	-		MPMX19_00966	0.47	+0.8
1,007,120	+		MPMX19_00966	0.88	-0.0
1,007,216	+				+0.5
1,007,216	+				+0.8
1,007,216	+				-1.3
1,007,216	+				-0.8
1,007,216	+				+0.4
1,007,216	+				+1.0
1,007,216	+				-0.3
1,007,216	+				-1.2
1,007,216	+				-0.7
1,007,216	+				-1.2
1,007,216	+				-1.6
1,007,216	+				-0.6
1,007,216	+				+0.8
1,007,216	+				-1.8
1,007,217	-				-0.6
1,007,217	-				-1.3
1,007,217	-				-0.0
1,007,217	-				-0.3
1,007,217	-				+0.2
1,007,217	-				-1.3
1,007,217	-				-1.0
1,007,217	-				-0.7
1,007,217	-				-1.6
1,007,217	-				+0.2
1,007,217	-				-0.3
1,007,217	-				+0.0
1,007,217	-				-0.4
1,007,217	-				-0.2
1,007,217	-				-1.7
1,007,255	+				-0.1
1,007,255	+				-0.4
1,007,256	-				-0.0
1,007,256	-				-1.9
1,007,256	-				+0.4
1,007,256	-				-1.0
1,007,256	-				-0.8
1,007,256	-				-0.7
1,007,256	-				-0.8
1,007,379	-				+0.2
1,007,379	-				+0.1
1,007,448	+				-0.7
1,007,448	+				-0.9
1,007,448	+				-1.5
1,007,448	+				-0.4
1,007,448	+				-0.3
1,007,449	-				-0.3
1,007,449	-				+0.7
1,007,449	-				-1.9
1,007,449	-				-0.6
1,007,449	-				-0.7
1,007,485	+				+1.0
1,007,485	+				+0.2
1,007,485	+				-0.7
1,007,485	+				+0.4
1,007,486	-				+0.2
1,007,486	-				-0.6
1,007,530	-				-0.5
1,007,667	+		MPMX19_00967	0.11	-1.3
1,007,667	+		MPMX19_00967	0.11	-1.4
1,007,667	+		MPMX19_00967	0.11	+0.7
1,007,667	+		MPMX19_00967	0.11	-0.5
1,007,667	+		MPMX19_00967	0.11	-0.0
1,007,667	+		MPMX19_00967	0.11	-2.0
1,007,667	+		MPMX19_00967	0.11	+0.2
1,007,667	+		MPMX19_00967	0.11	+1.6
1,007,667	+		MPMX19_00967	0.11	-0.5
1,007,667	+		MPMX19_00967	0.11	+0.4
1,007,667	+		MPMX19_00967	0.11	+0.1
1,007,667	+		MPMX19_00967	0.11	-1.6
1,007,667	+		MPMX19_00967	0.11	+2.0
1,007,667	+		MPMX19_00967	0.11	-0.5
1,007,667	+		MPMX19_00967	0.11	-1.3
1,007,667	+		MPMX19_00967	0.11	-0.9
1,007,668	-		MPMX19_00967	0.11	-2.0
1,007,668	-		MPMX19_00967	0.11	-0.7
1,007,668	-		MPMX19_00967	0.11	-0.6
1,007,668	-		MPMX19_00967	0.11	+0.2
1,007,668	-		MPMX19_00967	0.11	+0.8
1,007,668	-		MPMX19_00967	0.11	-1.0
1,007,668	-		MPMX19_00967	0.11	+0.4
1,007,668	-		MPMX19_00967	0.11	-0.4
1,007,668	-		MPMX19_00967	0.11	-1.6
1,007,668	-		MPMX19_00967	0.11	-1.6
1,007,668	-		MPMX19_00967	0.11	+0.6
1,007,668	-		MPMX19_00967	0.11	-0.7
1,007,668	-		MPMX19_00967	0.11	-1.1
1,007,668	-		MPMX19_00967	0.11	-1.6
1,007,668	-		MPMX19_00967	0.11	-0.3
1,007,668	-		MPMX19_00967	0.11	-0.6
1,007,668	-		MPMX19_00967	0.11	-1.8
1,007,668	-		MPMX19_00967	0.11	+0.2
1,007,668	-		MPMX19_00967	0.11	-0.5
1,007,668	-		MPMX19_00967	0.11	-0.0
1,007,668	-		MPMX19_00967	0.11	-1.0
1,007,668	-		MPMX19_00967	0.11	-0.6
1,007,847	+		MPMX19_00967	0.32	+0.2
1,007,847	+		MPMX19_00967	0.32	+0.3
1,007,847	+		MPMX19_00967	0.32	-1.1
1,007,847	+		MPMX19_00967	0.32	+0.3
1,007,847	+		MPMX19_00967	0.32	+1.0
1,007,847	+		MPMX19_00967	0.32	+1.0
1,007,847	+		MPMX19_00967	0.32	-1.3
1,007,847	+		MPMX19_00967	0.32	+0.7
1,007,847	+		MPMX19_00967	0.32	-0.1
1,007,847	+		MPMX19_00967	0.32	+1.0
1,007,847	+		MPMX19_00967	0.32	-0.4
1,007,847	+		MPMX19_00967	0.32	-0.4
1,007,847	+		MPMX19_00967	0.32	-1.3
1,007,847	+		MPMX19_00967	0.32	+0.1
1,007,847	+		MPMX19_00967	0.32	+0.4
1,007,847	+		MPMX19_00967	0.32	-1.0
1,007,847	+		MPMX19_00967	0.32	-2.1
1,007,847	+		MPMX19_00967	0.32	-1.3
1,007,847	+		MPMX19_00967	0.32	-0.3
1,007,847	+		MPMX19_00967	0.32	+1.4
1,007,847	+		MPMX19_00967	0.32	-1.4
1,007,848	-		MPMX19_00967	0.32	-1.1
1,007,848	-		MPMX19_00967	0.32	-1.4
1,007,848	-		MPMX19_00967	0.32	-0.5
1,007,848	-		MPMX19_00967	0.32	-2.1
1,007,848	-		MPMX19_00967	0.32	-0.5
1,007,848	-		MPMX19_00967	0.32	+1.1
1,007,848	-		MPMX19_00967	0.32	-1.6
1,007,848	-		MPMX19_00967	0.32	-0.0
1,007,848	-		MPMX19_00967	0.32	-1.6
1,007,848	-		MPMX19_00967	0.32	-0.0
1,007,848	-		MPMX19_00967	0.32	-0.7
1,007,848	-		MPMX19_00967	0.32	+0.8
1,007,848	-		MPMX19_00967	0.32	-1.7
1,007,848	-		MPMX19_00967	0.32	-1.8
1,007,848	-		MPMX19_00967	0.32	+0.1
1,007,848	-		MPMX19_00967	0.32	-0.9
1,007,848	-		MPMX19_00967	0.32	-2.3
1,007,848	-		MPMX19_00967	0.32	-0.2
1,007,848	-		MPMX19_00967	0.32	-0.3
1,007,848	-		MPMX19_00967	0.32	-0.4
1,007,848	-		MPMX19_00967	0.32	+1.0
1,008,267	+		MPMX19_00967	0.83	-0.6
1,008,268	-		MPMX19_00967	0.83	+0.2