Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00963

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,001,482	+		MPMX19_00962	0.42	-0.6
1,001,482	+		MPMX19_00962	0.42	-0.0
1,001,482	+		MPMX19_00962	0.42	-0.5
1,001,483	-		MPMX19_00962	0.42	+0.4
1,001,483	-		MPMX19_00962	0.42	+0.1
1,001,483	-		MPMX19_00962	0.42	-1.5
1,001,617	+		MPMX19_00962	0.55	+0.7
1,001,617	+		MPMX19_00962	0.55	-0.0
1,001,617	+		MPMX19_00962	0.55	-0.2
1,001,617	+		MPMX19_00962	0.55	-1.3
1,001,617	+		MPMX19_00962	0.55	+0.3
1,001,617	+		MPMX19_00962	0.55	-1.2
1,001,617	+		MPMX19_00962	0.55	+0.7
1,001,617	+		MPMX19_00962	0.55	-1.1
1,001,617	+		MPMX19_00962	0.55	-0.6
1,001,617	+		MPMX19_00962	0.55	-0.7
1,001,617	+		MPMX19_00962	0.55	+0.2
1,001,617	+		MPMX19_00962	0.55	-1.7
1,001,617	+		MPMX19_00962	0.55	-0.8
1,001,617	+		MPMX19_00962	0.55	-0.6
1,001,617	+		MPMX19_00962	0.55	-0.2
1,001,617	+		MPMX19_00962	0.55	-0.5
1,001,617	+		MPMX19_00962	0.55	+1.7
1,001,617	+		MPMX19_00962	0.55	-0.6
1,001,617	+		MPMX19_00962	0.55	+0.9
1,001,617	+		MPMX19_00962	0.55	+0.3
1,001,617	+		MPMX19_00962	0.55	+0.2
1,001,617	+		MPMX19_00962	0.55	-0.0
1,001,617	+		MPMX19_00962	0.55	+0.5
1,001,617	+		MPMX19_00962	0.55	-0.7
1,001,617	+		MPMX19_00962	0.55	-0.8
1,001,617	+		MPMX19_00962	0.55	-0.3
1,001,617	+		MPMX19_00962	0.55	-0.3
1,001,617	+		MPMX19_00962	0.55	-1.0
1,001,617	+		MPMX19_00962	0.55	-1.6
1,001,617	+		MPMX19_00962	0.55	-0.2
1,001,617	+		MPMX19_00962	0.55	-0.5
1,001,617	+		MPMX19_00962	0.55	+0.8
1,001,617	+		MPMX19_00962	0.55	-2.2
1,001,617	+		MPMX19_00962	0.55	-1.5
1,001,617	+		MPMX19_00962	0.55	-3.2
1,001,617	+		MPMX19_00962	0.55	-0.6
1,001,618	-		MPMX19_00962	0.55	-2.0
1,001,618	-		MPMX19_00962	0.55	+0.5
1,001,618	-		MPMX19_00962	0.55	+0.8
1,001,618	-		MPMX19_00962	0.55	+0.2
1,001,618	-		MPMX19_00962	0.55	-0.8
1,001,618	-		MPMX19_00962	0.55	+0.2
1,001,618	-		MPMX19_00962	0.55	-0.8
1,001,618	-		MPMX19_00962	0.55	-0.7
1,001,618	-		MPMX19_00962	0.55	-0.5
1,001,618	-		MPMX19_00962	0.55	-1.0
1,001,618	-		MPMX19_00962	0.55	+0.1
1,001,618	-		MPMX19_00962	0.55	+0.6
1,001,618	-		MPMX19_00962	0.55	-0.2
1,001,618	-		MPMX19_00962	0.55	+0.2
1,001,618	-		MPMX19_00962	0.55	-1.2
1,001,618	-		MPMX19_00962	0.55	+1.1
1,001,618	-		MPMX19_00962	0.55	+1.0
1,001,618	-		MPMX19_00962	0.55	-0.9
1,001,618	-		MPMX19_00962	0.55	-0.3
1,001,618	-		MPMX19_00962	0.55	-0.7
1,001,618	-		MPMX19_00962	0.55	-0.7
1,001,618	-		MPMX19_00962	0.55	-0.4
1,001,618	-		MPMX19_00962	0.55	-1.3
1,001,618	-		MPMX19_00962	0.55	-0.3
1,001,618	-		MPMX19_00962	0.55	-1.3
1,001,618	-		MPMX19_00962	0.55	-1.8
1,001,618	-		MPMX19_00962	0.55	+1.4
1,001,618	-		MPMX19_00962	0.55	-0.3
1,001,618	-		MPMX19_00962	0.55	+1.4
1,001,618	-		MPMX19_00962	0.55	-1.3
1,001,618	-		MPMX19_00962	0.55	+0.4
1,001,618	-		MPMX19_00962	0.55	-0.7
1,001,618	-		MPMX19_00962	0.55	-1.3
1,001,618	-		MPMX19_00962	0.55	+1.1
1,001,619	+		MPMX19_00962	0.55	-0.5
1,001,619	+		MPMX19_00962	0.55	+0.8
1,001,620	-		MPMX19_00962	0.55	+0.1
1,001,683	+		MPMX19_00962	0.61	-0.0
1,001,683	+		MPMX19_00962	0.61	-0.2
1,001,683	+		MPMX19_00962	0.61	+0.7
1,001,683	+		MPMX19_00962	0.61	-0.4
1,001,683	+		MPMX19_00962	0.61	-0.8
1,001,683	+		MPMX19_00962	0.61	-0.8
1,001,683	+		MPMX19_00962	0.61	-0.7
1,001,683	+		MPMX19_00962	0.61	-1.0
1,001,683	+		MPMX19_00962	0.61	-0.5
1,001,683	+		MPMX19_00962	0.61	-0.8
1,001,683	+		MPMX19_00962	0.61	+0.1
1,001,683	+		MPMX19_00962	0.61	+0.0
1,001,683	+		MPMX19_00962	0.61	-1.2
1,001,683	+		MPMX19_00962	0.61	-1.5
1,001,684	-		MPMX19_00962	0.61	-0.7
1,001,684	-		MPMX19_00962	0.61	+0.5
1,001,684	-		MPMX19_00962	0.61	-0.0
1,001,684	-		MPMX19_00962	0.61	+0.3
1,001,684	-		MPMX19_00962	0.61	-0.6
1,001,684	-		MPMX19_00962	0.61	-2.5
1,001,684	-		MPMX19_00962	0.61	-0.6
1,001,684	-		MPMX19_00962	0.61	-0.7
1,001,684	-		MPMX19_00962	0.61	+0.7
1,001,684	-		MPMX19_00962	0.61	-1.2
1,001,684	-		MPMX19_00962	0.61	-0.6
1,001,684	-		MPMX19_00962	0.61	-1.1
1,001,684	-		MPMX19_00962	0.61	-0.3
1,001,684	-		MPMX19_00962	0.61	-1.0
1,001,684	-		MPMX19_00962	0.61	-0.8
1,001,684	-		MPMX19_00962	0.61	-0.1
1,001,684	-		MPMX19_00962	0.61	-1.0
1,001,713	+		MPMX19_00962	0.64	+0.7
1,001,713	+		MPMX19_00962	0.64	+0.8
1,001,713	+		MPMX19_00962	0.64	-1.0
1,001,713	+		MPMX19_00962	0.64	-0.0
1,001,713	+		MPMX19_00962	0.64	+0.2
1,001,713	+		MPMX19_00962	0.64	-0.1
1,001,713	+		MPMX19_00962	0.64	-1.0
1,001,713	+		MPMX19_00962	0.64	-1.0
1,001,713	+		MPMX19_00962	0.64	-1.7
1,001,713	+		MPMX19_00962	0.64	-0.9
1,001,713	+		MPMX19_00962	0.64	-0.2
1,001,713	+		MPMX19_00962	0.64	-0.0
1,001,713	+		MPMX19_00962	0.64	+0.4
1,001,713	+		MPMX19_00962	0.64	+0.4
1,001,713	+		MPMX19_00962	0.64	-0.0
1,001,714	-		MPMX19_00962	0.64	+1.0
1,001,714	-		MPMX19_00962	0.64	-0.6
1,001,714	-		MPMX19_00962	0.64	+0.4
1,001,714	-		MPMX19_00962	0.64	-0.3
1,001,714	-		MPMX19_00962	0.64	+1.2
1,001,714	-		MPMX19_00962	0.64	+0.4
1,001,714	-		MPMX19_00962	0.64	-1.6
1,001,714	-		MPMX19_00962	0.64	+1.6
1,001,714	-		MPMX19_00962	0.64	-0.7
1,002,088	+				+0.8
1,002,088	+				-1.9
1,002,088	+				+2.0
1,002,088	+				-1.6
1,002,088	+				-0.2
1,002,088	+				+0.5
1,002,088	+				-0.5
1,002,088	+				+0.2
1,002,088	+				-1.9
1,002,088	+				-0.0
1,002,088	+				-1.2
1,002,088	+				-0.6
1,002,088	+				-0.8
1,002,088	+				-1.2
1,002,088	+				-1.2
1,002,088	+				+0.0
1,002,088	+				-0.5
1,002,088	+				+0.2
1,002,088	+				+2.0
1,002,088	+				+0.7
1,002,088	+				-1.5
1,002,088	+				-0.7
1,002,088	+				-0.6
1,002,088	+				-1.3
1,002,088	+				+1.0
1,002,089	-				-1.5
1,002,089	-				-1.5
1,002,089	-				-1.5
1,002,089	-				-0.3
1,002,089	-				+1.3
1,002,089	-				-1.3
1,002,089	-				+0.9
1,002,089	-				-1.0
1,002,089	-				-0.5
1,002,089	-				-1.0
1,002,089	-				-1.0
1,002,089	-				-0.5
1,002,089	-				+0.5
1,002,089	-				-0.6
1,002,089	-				-1.0
1,002,089	-				-0.5
1,002,089	-				-0.0
1,002,089	-				-1.2
1,002,089	-				+1.0
1,002,089	-				-0.3
1,002,146	+				-0.1
1,002,146	+				-0.4
1,002,146	+				+1.0
1,002,146	+				-0.5
1,002,146	+				-2.4
1,002,146	+				+0.4
1,002,147	-				-2.2
1,002,147	-				-1.3
1,002,147	-				+1.0
1,002,147	-				-0.6
1,002,147	-				-0.8
1,002,147	-				-0.9
1,002,147	-				-1.0
1,002,147	-				+0.8
1,002,266	+		MPMX19_00963	0.22	+0.7
1,002,266	+		MPMX19_00963	0.22	-1.1
1,002,266	+		MPMX19_00963	0.22	+0.7
1,002,266	+		MPMX19_00963	0.22	+0.5
1,002,266	+		MPMX19_00963	0.22	-1.6
1,002,266	+		MPMX19_00963	0.22	-1.3
1,002,266	+		MPMX19_00963	0.22	-1.0
1,002,266	+		MPMX19_00963	0.22	-1.9
1,002,266	+		MPMX19_00963	0.22	-1.2
1,002,267	-		MPMX19_00963	0.22	-3.1
1,002,267	-		MPMX19_00963	0.22	-1.9
1,002,267	-		MPMX19_00963	0.22	+1.0
1,002,267	-		MPMX19_00963	0.22	-0.8
1,002,267	-		MPMX19_00963	0.22	-0.6
1,002,267	-		MPMX19_00963	0.22	-1.5
1,002,267	-		MPMX19_00963	0.22	+0.1
1,002,267	-		MPMX19_00963	0.22	-1.2
1,002,556	+		MPMX19_00963	0.60	-0.2
1,002,556	+		MPMX19_00963	0.60	-0.1
1,002,556	+		MPMX19_00963	0.60	+0.4
1,002,557	-		MPMX19_00963	0.60	-0.5
1,002,557	-		MPMX19_00963	0.60	-1.2
1,002,557	-		MPMX19_00963	0.60	-1.1
1,002,557	-		MPMX19_00963	0.60	-0.3
1,002,557	-		MPMX19_00963	0.60	-0.6
1,002,557	-		MPMX19_00963	0.60	-1.2
1,002,557	-		MPMX19_00963	0.60	-1.6
1,002,563	+		MPMX19_00963	0.61	-0.7
1,002,563	+		MPMX19_00963	0.61	+0.8
1,002,563	+		MPMX19_00963	0.61	-0.8
1,002,563	+		MPMX19_00963	0.61	-0.2
1,002,563	+		MPMX19_00963	0.61	+2.0
1,002,563	+		MPMX19_00963	0.61	+0.4
1,002,563	+		MPMX19_00963	0.61	-0.8
1,002,564	-		MPMX19_00963	0.61	-0.0
1,002,564	-		MPMX19_00963	0.61	-1.3
1,002,564	-		MPMX19_00963	0.61	-1.6
1,002,564	-		MPMX19_00963	0.61	-1.4
1,002,564	-		MPMX19_00963	0.61	-0.0
1,002,564	-		MPMX19_00963	0.61	-0.4
1,002,564	-		MPMX19_00963	0.61	-0.6
1,002,797	+				-0.2
1,002,797	+				-1.5
1,002,797	+				-0.2
1,002,797	+				-1.7
1,002,797	+				-0.0
1,002,798	-				-0.2
1,002,798	-				-1.3
1,002,798	-				+0.4
1,002,798	-				-0.3
1,002,798	-				-0.5
1,002,798	-				-1.0
1,002,900	+				-0.8
1,002,900	+				-0.5
1,002,900	+				-0.6
1,002,900	+				-1.2
1,002,900	+				+1.2
1,002,901	-				+0.6
1,002,901	-				-0.3
1,002,901	-				-0.3
1,002,901	-				-0.4
1,002,901	-				-1.6
1,002,939	+				-0.9
1,002,939	+				-0.7
1,002,939	+				-1.8
1,002,939	+				-1.0
1,002,940	-				-1.0
1,002,981	+				-1.0
1,002,981	+				-0.6
1,002,981	+				+0.7
1,002,981	+				+1.6
1,002,981	+				-0.3
1,002,981	+				-0.3
1,002,981	+				-0.6
1,002,981	+				-0.1
1,002,981	+				-1.2
1,002,981	+				-0.9
1,002,981	+				-0.3
1,002,981	+				-1.1
1,002,981	+				-1.5
1,002,981	+				+0.6
1,002,981	+				-0.6
1,002,981	+				+0.7
1,002,981	+				-1.1
1,002,981	+				-0.8
1,002,981	+				-2.3
1,002,981	+				+0.2
1,002,981	+				+0.4
1,002,981	+				-0.6
1,002,982	-				-1.1
1,002,982	-				-0.3
1,002,982	-				-0.7
1,002,982	-				-0.0
1,002,982	-				-1.5
1,002,982	-				+1.0
1,002,982	-				+0.4
1,002,982	-				-1.5
1,002,982	-				-0.7
1,002,982	-				+0.3
1,002,982	-				+0.5
1,002,982	-				-1.2
1,002,982	-				-0.1
1,002,982	-				-0.3
1,002,982	-				+0.8
1,002,982	-				-1.2
1,002,982	-				-0.3
1,002,982	-				+0.4
1,002,982	-				-0.5
1,002,982	-				-1.9
1,002,983	+				-0.5
1,002,983	+				-1.3
1,002,983	+				-1.8
1,002,983	+				-1.2
1,002,983	+				+0.2
1,002,983	+				-0.1
1,002,983	+				-0.4
1,002,983	+				+0.8
1,002,983	+				+0.8
1,002,983	+				-0.0
1,002,983	+				-0.6
1,002,983	+				-1.1
1,002,983	+				+1.1
1,002,984	-				-0.3
1,002,984	-				-1.3
1,002,984	-				-2.1
1,002,984	-				-0.6
1,002,984	-				+0.8
1,002,984	-				-0.1
1,002,984	-				-0.8
1,002,984	-				+1.2
1,002,984	-				-0.0
1,002,984	-				-2.8
1,002,984	-				-0.7
1,002,984	-				+0.7
1,002,984	-				-0.7
1,002,984	-				+0.2
1,002,984	-				+0.6
1,002,984	-				-0.7
1,002,996	+				-1.2
1,003,027	+				-2.1
1,003,028	-				-1.7
1,003,028	-				+0.7
1,003,028	-				-1.7
1,003,388	-		MPMX19_00964	0.22	-0.8
1,003,762	+		MPMX19_00964	0.46	-1.3
1,003,762	+		MPMX19_00964	0.46	-1.1
1,003,762	+		MPMX19_00964	0.46	+0.6
1,003,762	+		MPMX19_00964	0.46	-2.2
1,003,762	+		MPMX19_00964	0.46	-0.3
1,003,762	+		MPMX19_00964	0.46	-0.0
1,003,762	+		MPMX19_00964	0.46	-0.8
1,003,762	+		MPMX19_00964	0.46	-0.3
1,003,762	+		MPMX19_00964	0.46	-1.0
1,003,762	+		MPMX19_00964	0.46	-1.3
1,003,762	+		MPMX19_00964	0.46	-1.0
1,003,762	+		MPMX19_00964	0.46	-1.5
1,003,762	+		MPMX19_00964	0.46	-0.1
1,003,762	+		MPMX19_00964	0.46	-1.7
1,003,762	+		MPMX19_00964	0.46	-0.5
1,003,762	+		MPMX19_00964	0.46	-1.3
1,003,762	+		MPMX19_00964	0.46	+0.6
1,003,762	+		MPMX19_00964	0.46	-1.2
1,003,762	+		MPMX19_00964	0.46	-0.1
1,003,762	+		MPMX19_00964	0.46	+0.4
1,003,762	+		MPMX19_00964	0.46	+0.6
1,003,762	+		MPMX19_00964	0.46	-0.3
1,003,762	+		MPMX19_00964	0.46	+0.2
1,003,762	+		MPMX19_00964	0.46	-1.6
1,003,762	+		MPMX19_00964	0.46	+0.5
1,003,762	+		MPMX19_00964	0.46	-0.3
1,003,762	+		MPMX19_00964	0.46	+0.3
1,003,762	+		MPMX19_00964	0.46	-0.1
1,003,762	+		MPMX19_00964	0.46	-0.3
1,003,762	+		MPMX19_00964	0.46	+0.4
1,003,762	+		MPMX19_00964	0.46	-1.0
1,003,762	+		MPMX19_00964	0.46	-1.3
1,003,762	+		MPMX19_00964	0.46	+0.6
1,003,762	+		MPMX19_00964	0.46	-1.6
1,003,762	+		MPMX19_00964	0.46	-0.5
1,003,762	+		MPMX19_00964	0.46	-1.5
1,003,762	+		MPMX19_00964	0.46	+0.1
1,003,762	+		MPMX19_00964	0.46	-0.7
1,003,762	+		MPMX19_00964	0.46	-1.7
1,003,762	+		MPMX19_00964	0.46	+0.4
1,003,762	+		MPMX19_00964	0.46	+1.2
1,003,762	+		MPMX19_00964	0.46	-1.2
1,003,762	+		MPMX19_00964	0.46	-0.9
1,003,762	+		MPMX19_00964	0.46	-0.8
1,003,762	+		MPMX19_00964	0.46	-1.2
1,003,762	+		MPMX19_00964	0.46	+0.2
1,003,762	+		MPMX19_00964	0.46	+0.2
1,003,763	-		MPMX19_00964	0.46	+0.8
1,003,763	-		MPMX19_00964	0.46	-1.3
1,003,763	-		MPMX19_00964	0.46	+0.2
1,003,763	-		MPMX19_00964	0.46	-0.8
1,003,763	-		MPMX19_00964	0.46	-0.5
1,003,763	-		MPMX19_00964	0.46	-0.2
1,003,763	-		MPMX19_00964	0.46	+0.1
1,003,763	-		MPMX19_00964	0.46	-1.5
1,003,763	-		MPMX19_00964	0.46	-1.2
1,003,763	-		MPMX19_00964	0.46	+0.2
1,003,763	-		MPMX19_00964	0.46	-0.3
1,003,763	-		MPMX19_00964	0.46	-0.3
1,003,763	-		MPMX19_00964	0.46	+0.5
1,003,763	-		MPMX19_00964	0.46	-0.1
1,003,763	-		MPMX19_00964	0.46	-1.3
1,003,763	-		MPMX19_00964	0.46	-0.8
1,003,763	-		MPMX19_00964	0.46	-0.4
1,003,763	-		MPMX19_00964	0.46	+0.1
1,003,763	-		MPMX19_00964	0.46	-1.9
1,003,763	-		MPMX19_00964	0.46	+0.1
1,003,763	-		MPMX19_00964	0.46	-1.7
1,003,763	-		MPMX19_00964	0.46	-1.6
1,003,763	-		MPMX19_00964	0.46	-0.3
1,003,763	-		MPMX19_00964	0.46	-0.9
1,003,763	-		MPMX19_00964	0.46	-1.7
1,003,763	-		MPMX19_00964	0.46	-0.7
1,003,763	-		MPMX19_00964	0.46	-1.3
1,003,763	-		MPMX19_00964	0.46	-1.3
1,003,763	-		MPMX19_00964	0.46	-1.0
1,003,763	-		MPMX19_00964	0.46	-0.4
1,003,763	-		MPMX19_00964	0.46	-0.3
1,003,763	-		MPMX19_00964	0.46	+0.4
1,003,763	-		MPMX19_00964	0.46	-0.0
1,003,763	-		MPMX19_00964	0.46	+0.2
1,003,763	-		MPMX19_00964	0.46	-0.5
1,003,763	-		MPMX19_00964	0.46	-1.0
1,003,763	-		MPMX19_00964	0.46	-0.4
1,003,763	-		MPMX19_00964	0.46	-0.5
1,003,763	-		MPMX19_00964	0.46	-0.2
1,003,763	-		MPMX19_00964	0.46	-0.5
1,003,763	-		MPMX19_00964	0.46	+0.2
1,003,763	-		MPMX19_00964	0.46	-1.8
1,003,763	-		MPMX19_00964	0.46	-0.9
1,003,763	-		MPMX19_00964	0.46	-0.6