Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00961

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
999,680	+		MPMX19_00959	0.84	-0.0
999,681	-		MPMX19_00959	0.85	+0.7
999,681	-		MPMX19_00959	0.85	-0.4
999,681	-		MPMX19_00959	0.85	-1.5
999,681	-		MPMX19_00959	0.85	+0.8
999,681	-		MPMX19_00959	0.85	-2.0
999,948	+				+0.2
999,948	+				+0.7
999,948	+				+0.7
999,948	+				-1.9
999,949	-				-1.0
999,949	-				-0.8
999,949	-				-1.4
999,949	-				+1.8
999,949	-				-1.0
1,000,015	-				-0.6
1,000,015	-				-0.2
1,000,026	+				-0.2
1,000,026	+				-0.6
1,000,026	+				-2.4
1,000,026	+				-1.1
1,000,026	+				-0.3
1,000,026	+				-1.3
1,000,026	+				+1.1
1,000,026	+				-0.5
1,000,026	+				-0.7
1,000,026	+				-0.6
1,000,026	+				-1.9
1,000,027	-				-1.9
1,000,027	-				-0.6
1,000,027	-				+1.2
1,000,027	-				-0.4
1,000,027	-				+0.7
1,000,027	-				-0.6
1,000,027	-				+0.7
1,000,027	-				+0.1
1,000,046	-				-0.3
1,000,086	+				-0.0
1,000,086	+				-0.7
1,000,086	+				-0.7
1,000,086	+				-0.5
1,000,086	+				+0.2
1,000,086	+				-0.7
1,000,086	+				-1.6
1,000,086	+				+0.4
1,000,086	+				-1.7
1,000,086	+				-1.0
1,000,086	+				-0.6
1,000,086	+				-0.0
1,000,086	+				-0.9
1,000,086	+				-1.1
1,000,086	+				-0.0
1,000,086	+				+0.7
1,000,086	+				+0.2
1,000,086	+				-1.1
1,000,086	+				+0.7
1,000,086	+				+1.7
1,000,086	+				-0.4
1,000,086	+				-0.1
1,000,087	-				-1.6
1,000,087	-				-0.3
1,000,087	-				+0.8
1,000,087	-				+1.0
1,000,087	-				-1.3
1,000,087	-				+0.2
1,000,087	-				-1.4
1,000,087	-				+1.2
1,000,087	-				-0.3
1,000,087	-				-0.3
1,000,087	-				-0.3
1,000,087	-				-0.0
1,000,087	-				-0.3
1,000,087	-				-2.3
1,000,097	+				-1.3
1,000,098	-				+0.2
1,000,098	-				-0.3
1,000,098	-				+0.8
1,000,143	+		MPMX19_00960	0.13	-0.2
1,000,144	-		MPMX19_00960	0.13	-1.5
1,000,159	+		MPMX19_00960	0.16	+2.0
1,000,159	+		MPMX19_00960	0.16	-0.8
1,000,159	+		MPMX19_00960	0.16	-0.5
1,000,160	-		MPMX19_00960	0.16	+1.4
1,000,160	-		MPMX19_00960	0.16	-0.0
1,000,160	-		MPMX19_00960	0.16	-1.0
1,000,160	-		MPMX19_00960	0.16	+2.0
1,000,164	+		MPMX19_00960	0.17	-0.3
1,000,164	+		MPMX19_00960	0.17	+0.2
1,000,164	+		MPMX19_00960	0.17	-2.2
1,000,164	+		MPMX19_00960	0.17	-0.5
1,000,164	+		MPMX19_00960	0.17	-0.3
1,000,164	+		MPMX19_00960	0.17	+1.0
1,000,164	+		MPMX19_00960	0.17	-0.8
1,000,164	+		MPMX19_00960	0.17	+0.2
1,000,164	+		MPMX19_00960	0.17	-0.3
1,000,165	-		MPMX19_00960	0.17	-1.0
1,000,165	-		MPMX19_00960	0.17	-0.0
1,000,165	-		MPMX19_00960	0.17	-1.8
1,000,165	-		MPMX19_00960	0.17	+0.6
1,000,165	-		MPMX19_00960	0.17	-1.8
1,000,165	-		MPMX19_00960	0.17	-0.6
1,000,165	-		MPMX19_00960	0.17	-1.2
1,000,165	-		MPMX19_00960	0.17	-0.6
1,000,165	-		MPMX19_00960	0.17	-0.4
1,000,464	+		MPMX19_00960	0.71	-0.0
1,000,464	+		MPMX19_00960	0.71	-0.8
1,000,464	+		MPMX19_00960	0.71	-0.8
1,000,464	+		MPMX19_00960	0.71	+0.6
1,000,464	+		MPMX19_00960	0.71	-0.2
1,000,464	+		MPMX19_00960	0.71	-1.2
1,000,464	+		MPMX19_00960	0.71	-0.7
1,000,464	+		MPMX19_00960	0.71	-1.1
1,000,464	+		MPMX19_00960	0.71	-1.3
1,000,464	+		MPMX19_00960	0.71	+0.3
1,000,464	+		MPMX19_00960	0.71	+1.2
1,000,464	+		MPMX19_00960	0.71	-1.0
1,000,464	+		MPMX19_00960	0.71	-0.5
1,000,464	+		MPMX19_00960	0.71	+0.8
1,000,464	+		MPMX19_00960	0.71	-0.2
1,000,464	+		MPMX19_00960	0.71	-0.5
1,000,464	+		MPMX19_00960	0.71	+0.1
1,000,464	+		MPMX19_00960	0.71	-1.1
1,000,464	+		MPMX19_00960	0.71	-1.0
1,000,464	+		MPMX19_00960	0.71	-0.8
1,000,464	+		MPMX19_00960	0.71	-0.8
1,000,464	+		MPMX19_00960	0.71	-3.1
1,000,464	+		MPMX19_00960	0.71	-1.3
1,000,464	+		MPMX19_00960	0.71	+0.2
1,000,465	-		MPMX19_00960	0.71	+0.7
1,000,465	-		MPMX19_00960	0.71	-0.0
1,000,465	-		MPMX19_00960	0.71	-0.3
1,000,465	-		MPMX19_00960	0.71	-0.2
1,000,465	-		MPMX19_00960	0.71	+0.2
1,000,465	-		MPMX19_00960	0.71	+0.6
1,000,465	-		MPMX19_00960	0.71	-0.7
1,000,465	-		MPMX19_00960	0.71	-0.2
1,000,465	-		MPMX19_00960	0.71	-0.5
1,000,465	-		MPMX19_00960	0.71	+0.2
1,000,465	-		MPMX19_00960	0.71	-0.0
1,000,465	-		MPMX19_00960	0.71	-2.4
1,000,465	-		MPMX19_00960	0.71	-1.5
1,000,468	-		MPMX19_00960	0.72	+0.4
1,000,468	-		MPMX19_00960	0.72	-0.3
1,000,468	-		MPMX19_00960	0.72	-1.0
1,000,468	-		MPMX19_00960	0.72	+1.0
1,000,564	-		MPMX19_00960	0.89	-0.4
1,000,564	-		MPMX19_00960	0.89	-0.9
1,000,564	-		MPMX19_00960	0.89	+1.1
1,000,564	-		MPMX19_00960	0.89	-0.3
1,000,618	+				-1.8
1,000,618	+				+1.4
1,000,618	+				-2.0
1,000,618	+				-0.3
1,000,618	+				-1.0
1,000,618	+				-1.3
1,000,618	+				-1.8
1,000,618	+				-1.4
1,000,618	+				-1.1
1,000,618	+				-0.0
1,000,618	+				-1.5
1,000,618	+				-0.8
1,000,618	+				-1.1
1,000,618	+				+1.0
1,000,618	+				-0.0
1,000,618	+				-1.5
1,000,618	+				+0.5
1,000,618	+				+0.8
1,000,618	+				-1.7
1,000,618	+				-2.4
1,000,618	+				-0.1
1,000,618	+				-2.1
1,000,618	+				+0.4
1,000,618	+				+0.1
1,000,618	+				-0.6
1,000,618	+				+0.2
1,000,618	+				-0.9
1,000,618	+				+0.8
1,000,619	-				-0.8
1,000,619	-				-0.2
1,000,619	-				+0.5
1,000,619	-				+1.2
1,000,619	-				-0.2
1,000,619	-				-0.7
1,000,619	-				+0.4
1,000,619	-				-0.3
1,000,619	-				+0.2
1,000,619	-				-0.0
1,000,619	-				-0.8
1,000,619	-				-1.0
1,000,619	-				-0.6
1,000,619	-				-1.0
1,000,619	-				-1.5
1,000,619	-				-1.0
1,000,619	-				-0.8
1,000,619	-				+0.7
1,000,619	-				+0.4
1,000,619	-				+0.4
1,000,619	-				+0.8
1,000,619	-				+0.3
1,000,619	-				-0.6
1,000,619	-				-1.0
1,000,619	-				-0.6
1,000,619	-				-2.1
1,000,619	-				-1.6
1,000,619	-				-1.5
1,000,619	-				-1.7
1,000,619	-				+0.4
1,000,619	-				-1.2
1,000,619	-				-1.3
1,000,619	-				+0.6
1,000,619	-				+0.4
1,000,619	-				-0.5
1,000,619	-				-0.7
1,000,619	-				+0.5
1,000,619	-				-1.2
1,000,619	-				-0.5
1,000,736	+		MPMX19_00961	0.27	-1.1
1,000,736	+		MPMX19_00961	0.27	-0.6
1,000,737	-		MPMX19_00961	0.28	+1.0
1,000,737	-		MPMX19_00961	0.28	-0.3
1,000,737	-		MPMX19_00961	0.28	-0.6
1,000,841	+		MPMX19_00961	0.52	-1.7
1,000,841	+		MPMX19_00961	0.52	-1.3
1,000,841	+		MPMX19_00961	0.52	-1.8
1,000,841	+		MPMX19_00961	0.52	-2.5
1,000,841	+		MPMX19_00961	0.52	+1.8
1,000,841	+		MPMX19_00961	0.52	+0.5
1,000,841	+		MPMX19_00961	0.52	-1.0
1,000,842	-		MPMX19_00961	0.52	-0.3
1,000,842	-		MPMX19_00961	0.52	+0.1
1,000,842	-		MPMX19_00961	0.52	-0.2
1,000,842	-		MPMX19_00961	0.52	+0.8
1,000,842	-		MPMX19_00961	0.52	-0.7
1,000,842	-		MPMX19_00961	0.52	-0.2
1,000,842	-		MPMX19_00961	0.52	-2.7
1,000,842	-		MPMX19_00961	0.52	-1.1
1,000,842	-		MPMX19_00961	0.52	-0.0
1,000,849	+		MPMX19_00961	0.54	-0.6
1,000,849	+		MPMX19_00961	0.54	-0.6
1,000,849	+		MPMX19_00961	0.54	-1.2
1,000,849	+		MPMX19_00961	0.54	-0.7
1,000,849	+		MPMX19_00961	0.54	-0.7
1,000,849	+		MPMX19_00961	0.54	+1.0
1,000,849	+		MPMX19_00961	0.54	+0.7
1,000,849	+		MPMX19_00961	0.54	-2.0
1,000,849	+		MPMX19_00961	0.54	-0.0
1,000,849	+		MPMX19_00961	0.54	-1.5
1,000,849	+		MPMX19_00961	0.54	-1.9
1,000,849	+		MPMX19_00961	0.54	-1.3
1,000,849	+		MPMX19_00961	0.54	-0.8
1,000,849	+		MPMX19_00961	0.54	-0.3
1,000,849	+		MPMX19_00961	0.54	-1.0
1,000,849	+		MPMX19_00961	0.54	-0.8
1,000,850	-		MPMX19_00961	0.54	-0.8
1,000,850	-		MPMX19_00961	0.54	+0.2
1,000,850	-		MPMX19_00961	0.54	-2.0
1,000,850	-		MPMX19_00961	0.54	+2.0
1,000,850	-		MPMX19_00961	0.54	-1.0
1,000,850	-		MPMX19_00961	0.54	-1.4
1,000,850	-		MPMX19_00961	0.54	-0.3
1,000,850	-		MPMX19_00961	0.54	-1.0
1,000,850	-		MPMX19_00961	0.54	-1.3
1,000,850	-		MPMX19_00961	0.54	+0.4
1,000,850	-		MPMX19_00961	0.54	+0.7
1,000,850	-		MPMX19_00961	0.54	+0.5
1,000,850	-		MPMX19_00961	0.54	+1.3
1,000,850	-		MPMX19_00961	0.54	-0.3
1,000,850	-		MPMX19_00961	0.54	-1.0
1,000,850	-		MPMX19_00961	0.54	-0.0
1,000,850	-		MPMX19_00961	0.54	+1.2
1,000,850	-		MPMX19_00961	0.54	-0.8
1,000,850	-		MPMX19_00961	0.54	-1.0
1,000,850	-		MPMX19_00961	0.54	-0.9
1,000,850	-		MPMX19_00961	0.54	-0.6
1,000,850	-		MPMX19_00961	0.54	-1.0
1,000,878	+		MPMX19_00961	0.61	+1.3
1,000,878	+		MPMX19_00961	0.61	-1.0
1,000,878	+		MPMX19_00961	0.61	+0.1
1,000,878	+		MPMX19_00961	0.61	-1.7
1,000,878	+		MPMX19_00961	0.61	-1.0
1,000,878	+		MPMX19_00961	0.61	-3.1
1,000,878	+		MPMX19_00961	0.61	-1.3
1,000,878	+		MPMX19_00961	0.61	-0.9
1,000,878	+		MPMX19_00961	0.61	-0.3
1,000,879	-		MPMX19_00961	0.61	-0.6
1,000,879	-		MPMX19_00961	0.61	-1.0
1,000,879	-		MPMX19_00961	0.61	-0.8
1,000,879	-		MPMX19_00961	0.61	+0.6
1,000,879	-		MPMX19_00961	0.61	-1.9
1,000,879	-		MPMX19_00961	0.61	-0.6
1,000,879	-		MPMX19_00961	0.61	-1.5
1,000,879	-		MPMX19_00961	0.61	+0.6
1,000,879	-		MPMX19_00961	0.61	-0.3
1,000,879	-		MPMX19_00961	0.61	-0.5
1,000,879	-		MPMX19_00961	0.61	+0.2
1,000,879	-		MPMX19_00961	0.61	-0.8
1,000,879	-		MPMX19_00961	0.61	+1.0
1,000,879	-		MPMX19_00961	0.61	+1.0
1,000,879	-		MPMX19_00961	0.61	-0.2
1,000,879	-		MPMX19_00961	0.61	-0.7
1,000,879	-		MPMX19_00961	0.61	-0.4
1,000,992	+		MPMX19_00961	0.88	-1.0
1,000,992	+		MPMX19_00961	0.88	-0.3
1,000,992	+		MPMX19_00961	0.88	-1.0
1,000,993	-		MPMX19_00961	0.88	+1.2
1,000,993	-		MPMX19_00961	0.88	+0.1
1,001,482	+		MPMX19_00962	0.42	-0.6
1,001,482	+		MPMX19_00962	0.42	-0.0
1,001,482	+		MPMX19_00962	0.42	-0.5
1,001,483	-		MPMX19_00962	0.42	+0.4
1,001,483	-		MPMX19_00962	0.42	+0.1
1,001,483	-		MPMX19_00962	0.42	-1.5
1,001,617	+		MPMX19_00962	0.55	+0.7
1,001,617	+		MPMX19_00962	0.55	-0.0
1,001,617	+		MPMX19_00962	0.55	-0.2
1,001,617	+		MPMX19_00962	0.55	-1.3
1,001,617	+		MPMX19_00962	0.55	+0.3
1,001,617	+		MPMX19_00962	0.55	-1.2
1,001,617	+		MPMX19_00962	0.55	+0.7
1,001,617	+		MPMX19_00962	0.55	-1.1
1,001,617	+		MPMX19_00962	0.55	-0.6
1,001,617	+		MPMX19_00962	0.55	-0.7
1,001,617	+		MPMX19_00962	0.55	+0.2
1,001,617	+		MPMX19_00962	0.55	-1.7
1,001,617	+		MPMX19_00962	0.55	-0.8
1,001,617	+		MPMX19_00962	0.55	-0.6
1,001,617	+		MPMX19_00962	0.55	-0.2
1,001,617	+		MPMX19_00962	0.55	-0.5
1,001,617	+		MPMX19_00962	0.55	+1.7
1,001,617	+		MPMX19_00962	0.55	-0.6
1,001,617	+		MPMX19_00962	0.55	+0.9
1,001,617	+		MPMX19_00962	0.55	+0.3
1,001,617	+		MPMX19_00962	0.55	+0.2
1,001,617	+		MPMX19_00962	0.55	-0.0
1,001,617	+		MPMX19_00962	0.55	+0.5
1,001,617	+		MPMX19_00962	0.55	-0.7
1,001,617	+		MPMX19_00962	0.55	-0.8
1,001,617	+		MPMX19_00962	0.55	-0.3
1,001,617	+		MPMX19_00962	0.55	-0.3
1,001,617	+		MPMX19_00962	0.55	-1.0
1,001,617	+		MPMX19_00962	0.55	-1.6
1,001,617	+		MPMX19_00962	0.55	-0.2
1,001,617	+		MPMX19_00962	0.55	-0.5
1,001,617	+		MPMX19_00962	0.55	+0.8
1,001,617	+		MPMX19_00962	0.55	-2.2
1,001,617	+		MPMX19_00962	0.55	-1.5
1,001,617	+		MPMX19_00962	0.55	-3.2
1,001,617	+		MPMX19_00962	0.55	-0.6
1,001,618	-		MPMX19_00962	0.55	-2.0
1,001,618	-		MPMX19_00962	0.55	+0.5
1,001,618	-		MPMX19_00962	0.55	+0.8
1,001,618	-		MPMX19_00962	0.55	+0.2
1,001,618	-		MPMX19_00962	0.55	-0.8
1,001,618	-		MPMX19_00962	0.55	+0.2
1,001,618	-		MPMX19_00962	0.55	-0.8
1,001,618	-		MPMX19_00962	0.55	-0.7
1,001,618	-		MPMX19_00962	0.55	-0.5
1,001,618	-		MPMX19_00962	0.55	-1.0
1,001,618	-		MPMX19_00962	0.55	+0.1
1,001,618	-		MPMX19_00962	0.55	+0.6
1,001,618	-		MPMX19_00962	0.55	-0.2
1,001,618	-		MPMX19_00962	0.55	+0.2
1,001,618	-		MPMX19_00962	0.55	-1.2
1,001,618	-		MPMX19_00962	0.55	+1.1
1,001,618	-		MPMX19_00962	0.55	+1.0
1,001,618	-		MPMX19_00962	0.55	-0.9
1,001,618	-		MPMX19_00962	0.55	-0.3
1,001,618	-		MPMX19_00962	0.55	-0.7
1,001,618	-		MPMX19_00962	0.55	-0.7
1,001,618	-		MPMX19_00962	0.55	-0.4
1,001,618	-		MPMX19_00962	0.55	-1.3
1,001,618	-		MPMX19_00962	0.55	-0.3
1,001,618	-		MPMX19_00962	0.55	-1.3
1,001,618	-		MPMX19_00962	0.55	-1.8
1,001,618	-		MPMX19_00962	0.55	+1.4
1,001,618	-		MPMX19_00962	0.55	-0.3
1,001,618	-		MPMX19_00962	0.55	+1.4
1,001,618	-		MPMX19_00962	0.55	-1.3
1,001,618	-		MPMX19_00962	0.55	+0.4
1,001,618	-		MPMX19_00962	0.55	-0.7
1,001,618	-		MPMX19_00962	0.55	-1.3
1,001,618	-		MPMX19_00962	0.55	+1.1
1,001,619	+		MPMX19_00962	0.55	-0.5
1,001,619	+		MPMX19_00962	0.55	+0.8
1,001,620	-		MPMX19_00962	0.55	+0.1
1,001,683	+		MPMX19_00962	0.61	-0.0
1,001,683	+		MPMX19_00962	0.61	-0.2
1,001,683	+		MPMX19_00962	0.61	+0.7
1,001,683	+		MPMX19_00962	0.61	-0.4
1,001,683	+		MPMX19_00962	0.61	-0.8
1,001,683	+		MPMX19_00962	0.61	-0.8
1,001,683	+		MPMX19_00962	0.61	-0.7
1,001,683	+		MPMX19_00962	0.61	-1.0
1,001,683	+		MPMX19_00962	0.61	-0.5
1,001,683	+		MPMX19_00962	0.61	-0.8
1,001,683	+		MPMX19_00962	0.61	+0.1
1,001,683	+		MPMX19_00962	0.61	+0.0
1,001,683	+		MPMX19_00962	0.61	-1.2
1,001,683	+		MPMX19_00962	0.61	-1.5
1,001,684	-		MPMX19_00962	0.61	-0.7
1,001,684	-		MPMX19_00962	0.61	+0.5
1,001,684	-		MPMX19_00962	0.61	-0.0
1,001,684	-		MPMX19_00962	0.61	+0.3
1,001,684	-		MPMX19_00962	0.61	-0.6
1,001,684	-		MPMX19_00962	0.61	-2.5
1,001,684	-		MPMX19_00962	0.61	-0.6
1,001,684	-		MPMX19_00962	0.61	-0.7
1,001,684	-		MPMX19_00962	0.61	+0.7
1,001,684	-		MPMX19_00962	0.61	-1.2
1,001,684	-		MPMX19_00962	0.61	-0.6
1,001,684	-		MPMX19_00962	0.61	-1.1
1,001,684	-		MPMX19_00962	0.61	-0.3
1,001,684	-		MPMX19_00962	0.61	-1.0
1,001,684	-		MPMX19_00962	0.61	-0.8
1,001,684	-		MPMX19_00962	0.61	-0.1
1,001,684	-		MPMX19_00962	0.61	-1.0
1,001,713	+		MPMX19_00962	0.64	+0.7
1,001,713	+		MPMX19_00962	0.64	+0.8
1,001,713	+		MPMX19_00962	0.64	-1.0
1,001,713	+		MPMX19_00962	0.64	-0.0
1,001,713	+		MPMX19_00962	0.64	+0.2
1,001,713	+		MPMX19_00962	0.64	-0.1
1,001,713	+		MPMX19_00962	0.64	-1.0
1,001,713	+		MPMX19_00962	0.64	-1.0
1,001,713	+		MPMX19_00962	0.64	-1.7
1,001,713	+		MPMX19_00962	0.64	-0.9
1,001,713	+		MPMX19_00962	0.64	-0.2
1,001,713	+		MPMX19_00962	0.64	-0.0
1,001,713	+		MPMX19_00962	0.64	+0.4
1,001,713	+		MPMX19_00962	0.64	+0.4
1,001,713	+		MPMX19_00962	0.64	-0.0
1,001,714	-		MPMX19_00962	0.64	+1.0
1,001,714	-		MPMX19_00962	0.64	-0.6
1,001,714	-		MPMX19_00962	0.64	+0.4
1,001,714	-		MPMX19_00962	0.64	-0.3
1,001,714	-		MPMX19_00962	0.64	+1.2
1,001,714	-		MPMX19_00962	0.64	+0.4
1,001,714	-		MPMX19_00962	0.64	-1.6
1,001,714	-		MPMX19_00962	0.64	+1.6
1,001,714	-		MPMX19_00962	0.64	-0.7