Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00753 and MPMX19_00754 are separated by 120 nucleotides MPMX19_00754 and MPMX19_00755 are separated by 9 nucleotides MPMX19_00755 and MPMX19_00756 are separated by 59 nucleotides MPMX19_00756 and MPMX19_00757 are separated by 59 nucleotides
MPMX19_00753: MPMX19_00753 - D-3-phosphoglycerate dehydrogenase, at 769,318 to 770,562
_00753
MPMX19_00754: MPMX19_00754 - hypothetical protein, at 770,683 to 771,405
_00754
MPMX19_00755: MPMX19_00755 - hypothetical protein, at 771,415 to 771,774
_00755
MPMX19_00756: MPMX19_00756 - hypothetical protein, at 771,834 to 772,088
_00756
MPMX19_00757: MPMX19_00757 - Carbamoyl-phosphate synthase small chain, at 772,148 to 773,320
_00757
Position (kb) 770
771
772 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.613 kb on - strand at 770.613 kb on - strand at 770.613 kb on - strand at 770.613 kb on - strand at 770.613 kb on - strand at 770.613 kb on - strand at 770.651 kb on + strand at 770.651 kb on + strand at 770.651 kb on + strand at 770.652 kb on - strand at 770.652 kb on - strand at 770.652 kb on - strand at 770.652 kb on - strand at 770.652 kb on - strand at 770.652 kb on - strand at 770.923 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 771.169 kb on - strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.320 kb on - strand, within MPMX19_00754 at 771.320 kb on - strand, within MPMX19_00754 at 771.320 kb on - strand, within MPMX19_00754 at 771.320 kb on - strand, within MPMX19_00754 at 771.320 kb on - strand, within MPMX19_00754 at 771.320 kb on - strand, within MPMX19_00754 at 771.320 kb on - strand, within MPMX19_00754 at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.638 kb on + strand, within MPMX19_00755 at 771.638 kb on + strand, within MPMX19_00755 at 771.638 kb on + strand, within MPMX19_00755 at 771.638 kb on + strand, within MPMX19_00755 at 771.638 kb on + strand, within MPMX19_00755 at 771.638 kb on + strand, within MPMX19_00755 at 771.639 kb on - strand, within MPMX19_00755 at 771.639 kb on - strand, within MPMX19_00755 at 771.639 kb on - strand, within MPMX19_00755 at 771.639 kb on - strand, within MPMX19_00755 at 771.639 kb on - strand, within MPMX19_00755 at 771.639 kb on - strand, within MPMX19_00755 at 771.639 kb on - strand, within MPMX19_00755 at 771.639 kb on - strand, within MPMX19_00755 at 771.833 kb on + strand at 771.833 kb on + strand at 771.834 kb on - strand at 771.960 kb on + strand, within MPMX19_00756 at 771.960 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.008 kb on + strand, within MPMX19_00756 at 772.009 kb on - strand, within MPMX19_00756 at 772.009 kb on - strand, within MPMX19_00756 at 772.009 kb on - strand, within MPMX19_00756 at 772.009 kb on - strand, within MPMX19_00756 at 772.009 kb on - strand, within MPMX19_00756 at 772.009 kb on - strand, within MPMX19_00756 at 772.009 kb on - strand, within MPMX19_00756 at 772.009 kb on - strand, within MPMX19_00756 at 772.009 kb on - strand, within MPMX19_00756 at 772.009 kb on - strand, within MPMX19_00756 at 772.009 kb on - strand, within MPMX19_00756 at 772.009 kb on - strand, within MPMX19_00756 at 772.009 kb on - strand, within MPMX19_00756 at 772.009 kb on - strand, within MPMX19_00756 at 772.009 kb on - strand, within MPMX19_00756 at 772.027 kb on + strand, within MPMX19_00756 at 772.028 kb on - strand, within MPMX19_00756 at 772.028 kb on - strand, within MPMX19_00756 at 772.076 kb on + strand at 772.077 kb on - strand at 772.077 kb on - strand at 772.077 kb on - strand at 772.086 kb on + strand at 772.087 kb on - strand at 772.087 kb on - strand at 772.087 kb on - strand at 772.089 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 770,612 + +0.7 770,612 + -0.7 770,612 + -1.6 770,612 + -1.3 770,612 + +1.0 770,612 + +0.2 770,612 + -0.2 770,612 + -1.4 770,612 + -0.7 770,612 + +0.7 770,612 + -1.4 770,612 + -1.2 770,613 - -1.2 770,613 - -0.9 770,613 - -0.6 770,613 - +0.4 770,613 - -0.8 770,613 - +0.3 770,651 + -0.8 770,651 + -1.6 770,651 + +0.5 770,652 - -1.1 770,652 - -0.2 770,652 - -0.5 770,652 - -0.8 770,652 - +0.0 770,652 - -0.8 770,923 + MPMX19_00754 0.33 -1.2 770,977 + MPMX19_00754 0.41 -1.2 770,977 + MPMX19_00754 0.41 +0.1 770,977 + MPMX19_00754 0.41 -1.3 770,977 + MPMX19_00754 0.41 -1.3 770,977 + MPMX19_00754 0.41 +0.6 770,977 + MPMX19_00754 0.41 -0.2 770,977 + MPMX19_00754 0.41 -0.7 770,977 + MPMX19_00754 0.41 +0.0 770,977 + MPMX19_00754 0.41 -0.8 770,977 + MPMX19_00754 0.41 -0.3 770,977 + MPMX19_00754 0.41 -0.5 770,977 + MPMX19_00754 0.41 +0.1 770,977 + MPMX19_00754 0.41 -0.7 770,977 + MPMX19_00754 0.41 -0.6 770,977 + MPMX19_00754 0.41 -1.4 770,977 + MPMX19_00754 0.41 +0.0 770,977 + MPMX19_00754 0.41 +1.2 770,977 + MPMX19_00754 0.41 +0.3 770,977 + MPMX19_00754 0.41 -0.3 770,977 + MPMX19_00754 0.41 +0.0 770,977 + MPMX19_00754 0.41 -1.0 770,978 - MPMX19_00754 0.41 -0.5 770,978 - MPMX19_00754 0.41 -0.3 770,978 - MPMX19_00754 0.41 -1.6 770,978 - MPMX19_00754 0.41 -1.4 770,978 - MPMX19_00754 0.41 -0.2 770,978 - MPMX19_00754 0.41 -1.5 770,978 - MPMX19_00754 0.41 +0.3 770,978 - MPMX19_00754 0.41 -1.3 770,978 - MPMX19_00754 0.41 +0.2 770,978 - MPMX19_00754 0.41 -0.7 770,978 - MPMX19_00754 0.41 -2.2 770,978 - MPMX19_00754 0.41 -0.5 770,978 - MPMX19_00754 0.41 +1.0 770,978 - MPMX19_00754 0.41 +0.0 770,978 - MPMX19_00754 0.41 -1.1 770,978 - MPMX19_00754 0.41 -0.5 770,978 - MPMX19_00754 0.41 -1.3 770,978 - MPMX19_00754 0.41 +0.1 770,978 - MPMX19_00754 0.41 -0.8 770,978 - MPMX19_00754 0.41 -0.1 770,978 - MPMX19_00754 0.41 +0.7 770,978 - MPMX19_00754 0.41 -0.2 771,169 - MPMX19_00754 0.67 +0.6 771,319 + MPMX19_00754 0.88 -0.2 771,319 + MPMX19_00754 0.88 -0.6 771,319 + MPMX19_00754 0.88 +0.7 771,319 + MPMX19_00754 0.88 -0.3 771,319 + MPMX19_00754 0.88 +0.0 771,319 + MPMX19_00754 0.88 -0.8 771,319 + MPMX19_00754 0.88 -0.2 771,319 + MPMX19_00754 0.88 +1.8 771,319 + MPMX19_00754 0.88 -0.8 771,320 - MPMX19_00754 0.88 -1.7 771,320 - MPMX19_00754 0.88 +1.4 771,320 - MPMX19_00754 0.88 -0.2 771,320 - MPMX19_00754 0.88 -1.0 771,320 - MPMX19_00754 0.88 +0.1 771,320 - MPMX19_00754 0.88 +0.6 771,320 - MPMX19_00754 0.88 +0.1 771,361 + +0.5 771,361 + +0.0 771,361 + -0.2 771,361 + +0.4 771,361 + -1.3 771,361 + -1.3 771,361 + -0.7 771,361 + -0.2 771,361 + -1.8 771,361 + -0.4 771,361 + -1.4 771,361 + -2.2 771,362 - -2.0 771,362 - +0.4 771,362 - +0.3 771,362 - +0.7 771,362 - +0.5 771,362 - -1.9 771,362 - +0.1 771,362 - +0.1 771,362 - -0.8 771,362 - -0.3 771,362 - -1.2 771,638 + MPMX19_00755 0.62 -0.5 771,638 + MPMX19_00755 0.62 -0.9 771,638 + MPMX19_00755 0.62 -0.1 771,638 + MPMX19_00755 0.62 +0.3 771,638 + MPMX19_00755 0.62 -0.8 771,638 + MPMX19_00755 0.62 -2.2 771,639 - MPMX19_00755 0.62 -0.2 771,639 - MPMX19_00755 0.62 +1.0 771,639 - MPMX19_00755 0.62 -0.1 771,639 - MPMX19_00755 0.62 -0.9 771,639 - MPMX19_00755 0.62 -0.3 771,639 - MPMX19_00755 0.62 -0.7 771,639 - MPMX19_00755 0.62 +0.3 771,639 - MPMX19_00755 0.62 +2.2 771,833 + +0.2 771,833 + -0.9 771,834 - -3.0 771,960 + MPMX19_00756 0.49 -0.0 771,960 + MPMX19_00756 0.49 -1.1 772,008 + MPMX19_00756 0.68 -1.9 772,008 + MPMX19_00756 0.68 -0.5 772,008 + MPMX19_00756 0.68 -1.0 772,008 + MPMX19_00756 0.68 -0.1 772,008 + MPMX19_00756 0.68 -1.2 772,008 + MPMX19_00756 0.68 +0.6 772,008 + MPMX19_00756 0.68 -0.8 772,008 + MPMX19_00756 0.68 -0.3 772,008 + MPMX19_00756 0.68 -0.2 772,008 + MPMX19_00756 0.68 -0.5 772,008 + MPMX19_00756 0.68 -0.1 772,008 + MPMX19_00756 0.68 -0.5 772,008 + MPMX19_00756 0.68 +0.3 772,008 + MPMX19_00756 0.68 -0.5 772,008 + MPMX19_00756 0.68 -1.8 772,008 + MPMX19_00756 0.68 -1.3 772,008 + MPMX19_00756 0.68 -0.3 772,008 + MPMX19_00756 0.68 +0.2 772,008 + MPMX19_00756 0.68 +0.0 772,008 + MPMX19_00756 0.68 -0.3 772,008 + MPMX19_00756 0.68 -0.6 772,009 - MPMX19_00756 0.69 -0.3 772,009 - MPMX19_00756 0.69 -1.1 772,009 - MPMX19_00756 0.69 -0.2 772,009 - MPMX19_00756 0.69 -1.0 772,009 - MPMX19_00756 0.69 +0.2 772,009 - MPMX19_00756 0.69 -0.8 772,009 - MPMX19_00756 0.69 -0.9 772,009 - MPMX19_00756 0.69 -2.0 772,009 - MPMX19_00756 0.69 +0.6 772,009 - MPMX19_00756 0.69 +0.8 772,009 - MPMX19_00756 0.69 -1.0 772,009 - MPMX19_00756 0.69 -1.7 772,009 - MPMX19_00756 0.69 -1.2 772,009 - MPMX19_00756 0.69 -0.3 772,009 - MPMX19_00756 0.69 -1.0 772,027 + MPMX19_00756 0.76 -0.3 772,028 - MPMX19_00756 0.76 -0.8 772,028 - MPMX19_00756 0.76 +0.3 772,076 + -1.5 772,077 - -0.7 772,077 - -1.0 772,077 - -0.4 772,086 + -0.6 772,087 - -0.8 772,087 - -2.1 772,087 - -1.7 772,089 - -1.5
Or see this region's nucleotide sequence