Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00734 and MPMX19_00735 overlap by 4 nucleotides MPMX19_00735 and MPMX19_00736 are separated by 78 nucleotides
MPMX19_00734: MPMX19_00734 - Riboflavin biosynthesis protein RibBA, at 755,554 to 756,693
_00734
MPMX19_00735: MPMX19_00735 - Riboflavin synthase, at 756,690 to 757,277
_00735
MPMX19_00736: MPMX19_00736 - Riboflavin biosynthesis protein RibD, at 757,356 to 758,498
_00736
Position (kb) 756
757
758 Strain fitness (log2 ratio) -2
-1
0
1
2 at 755.711 kb on + strand, within MPMX19_00734 at 755.711 kb on + strand, within MPMX19_00734 at 755.711 kb on + strand, within MPMX19_00734 at 755.712 kb on - strand, within MPMX19_00734 at 755.712 kb on - strand, within MPMX19_00734 at 755.712 kb on - strand, within MPMX19_00734 at 755.978 kb on + strand, within MPMX19_00734 at 755.979 kb on - strand, within MPMX19_00734 at 755.979 kb on - strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.996 kb on + strand, within MPMX19_00734 at 755.997 kb on - strand, within MPMX19_00734 at 755.997 kb on - strand, within MPMX19_00734 at 755.997 kb on - strand, within MPMX19_00734 at 755.997 kb on - strand, within MPMX19_00734 at 755.997 kb on - strand, within MPMX19_00734 at 755.997 kb on - strand, within MPMX19_00734 at 755.997 kb on - strand, within MPMX19_00734 at 755.997 kb on - strand, within MPMX19_00734 at 755.997 kb on - strand, within MPMX19_00734 at 756.002 kb on + strand, within MPMX19_00734 at 756.002 kb on + strand, within MPMX19_00734 at 756.002 kb on + strand, within MPMX19_00734 at 756.002 kb on + strand, within MPMX19_00734 at 756.002 kb on + strand, within MPMX19_00734 at 756.002 kb on + strand, within MPMX19_00734 at 756.002 kb on + strand, within MPMX19_00734 at 756.002 kb on + strand, within MPMX19_00734 at 756.002 kb on + strand, within MPMX19_00734 at 756.002 kb on + strand, within MPMX19_00734 at 756.002 kb on + strand, within MPMX19_00734 at 756.002 kb on + strand, within MPMX19_00734 at 756.002 kb on + strand, within MPMX19_00734 at 756.002 kb on + strand, within MPMX19_00734 at 756.002 kb on + strand, within MPMX19_00734 at 756.003 kb on - strand, within MPMX19_00734 at 756.003 kb on - strand, within MPMX19_00734 at 756.003 kb on - strand, within MPMX19_00734 at 756.003 kb on - strand, within MPMX19_00734 at 756.003 kb on - strand, within MPMX19_00734 at 756.003 kb on - strand, within MPMX19_00734 at 756.003 kb on - strand, within MPMX19_00734 at 756.003 kb on - strand, within MPMX19_00734 at 756.003 kb on - strand, within MPMX19_00734 at 756.003 kb on - strand, within MPMX19_00734 at 756.003 kb on - strand, within MPMX19_00734 at 756.003 kb on - strand, within MPMX19_00734 at 756.003 kb on - strand, within MPMX19_00734 at 756.246 kb on + strand, within MPMX19_00734 at 756.246 kb on + strand, within MPMX19_00734 at 756.247 kb on - strand, within MPMX19_00734 at 756.247 kb on - strand, within MPMX19_00734 at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 757.290 kb on - strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.358 kb on - strand at 757.358 kb on - strand at 757.358 kb on - strand at 757.358 kb on - strand at 757.358 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 755,711 + MPMX19_00734 0.14 -1.4 755,711 + MPMX19_00734 0.14 -1.0 755,711 + MPMX19_00734 0.14 -0.6 755,712 - MPMX19_00734 0.14 +1.8 755,712 - MPMX19_00734 0.14 -1.9 755,712 - MPMX19_00734 0.14 -0.6 755,978 + MPMX19_00734 0.37 -0.6 755,979 - MPMX19_00734 0.37 -0.1 755,979 - MPMX19_00734 0.37 -0.4 755,996 + MPMX19_00734 0.39 +0.1 755,996 + MPMX19_00734 0.39 -1.3 755,996 + MPMX19_00734 0.39 -0.4 755,996 + MPMX19_00734 0.39 +0.2 755,996 + MPMX19_00734 0.39 -1.3 755,996 + MPMX19_00734 0.39 -0.9 755,996 + MPMX19_00734 0.39 -0.6 755,996 + MPMX19_00734 0.39 -0.8 755,996 + MPMX19_00734 0.39 -1.0 755,996 + MPMX19_00734 0.39 -1.1 755,996 + MPMX19_00734 0.39 -0.7 755,996 + MPMX19_00734 0.39 -1.7 755,996 + MPMX19_00734 0.39 -0.1 755,996 + MPMX19_00734 0.39 -1.6 755,996 + MPMX19_00734 0.39 -0.7 755,996 + MPMX19_00734 0.39 -1.2 755,996 + MPMX19_00734 0.39 -1.1 755,996 + MPMX19_00734 0.39 -0.5 755,996 + MPMX19_00734 0.39 +0.0 755,997 - MPMX19_00734 0.39 -0.5 755,997 - MPMX19_00734 0.39 -0.8 755,997 - MPMX19_00734 0.39 -0.8 755,997 - MPMX19_00734 0.39 -1.4 755,997 - MPMX19_00734 0.39 -0.6 755,997 - MPMX19_00734 0.39 -0.5 755,997 - MPMX19_00734 0.39 -0.6 755,997 - MPMX19_00734 0.39 -2.7 755,997 - MPMX19_00734 0.39 -0.9 756,002 + MPMX19_00734 0.39 -1.2 756,002 + MPMX19_00734 0.39 +1.4 756,002 + MPMX19_00734 0.39 -0.7 756,002 + MPMX19_00734 0.39 -1.0 756,002 + MPMX19_00734 0.39 -0.6 756,002 + MPMX19_00734 0.39 -1.5 756,002 + MPMX19_00734 0.39 -1.1 756,002 + MPMX19_00734 0.39 -0.3 756,002 + MPMX19_00734 0.39 +0.1 756,002 + MPMX19_00734 0.39 -1.0 756,002 + MPMX19_00734 0.39 -1.7 756,002 + MPMX19_00734 0.39 -1.8 756,002 + MPMX19_00734 0.39 +1.3 756,002 + MPMX19_00734 0.39 -0.4 756,002 + MPMX19_00734 0.39 -1.0 756,003 - MPMX19_00734 0.39 -0.7 756,003 - MPMX19_00734 0.39 +0.0 756,003 - MPMX19_00734 0.39 -2.2 756,003 - MPMX19_00734 0.39 -0.3 756,003 - MPMX19_00734 0.39 +0.4 756,003 - MPMX19_00734 0.39 -0.1 756,003 - MPMX19_00734 0.39 -0.6 756,003 - MPMX19_00734 0.39 -1.3 756,003 - MPMX19_00734 0.39 -1.3 756,003 - MPMX19_00734 0.39 -1.3 756,003 - MPMX19_00734 0.39 -0.6 756,003 - MPMX19_00734 0.39 -0.7 756,003 - MPMX19_00734 0.39 -2.2 756,246 + MPMX19_00734 0.61 -1.3 756,246 + MPMX19_00734 0.61 -1.4 756,247 - MPMX19_00734 0.61 +1.2 756,247 - MPMX19_00734 0.61 -0.7 756,671 + -0.2 756,671 + -1.4 756,671 + +0.0 756,671 + -0.8 756,671 + -0.6 756,671 + +0.5 756,671 + -0.7 756,671 + -1.1 756,671 + +0.2 756,671 + -0.9 756,671 + -1.6 756,671 + -0.2 756,671 + +0.2 756,671 + +0.3 756,671 + -1.3 756,672 - -0.6 756,672 - -0.9 756,672 - +0.9 756,672 - -0.2 756,672 - -0.8 756,672 - +0.6 756,672 - -1.6 756,672 - +1.3 756,672 - -1.0 756,672 - -0.3 756,672 - -1.2 756,672 - +1.0 756,672 - -0.1 757,290 - -0.8 757,357 + -0.8 757,357 + +0.7 757,357 + +0.1 757,357 + -0.3 757,357 + +0.2 757,357 + +0.0 757,357 + -0.6 757,357 + -1.4 757,357 + +0.0 757,357 + +0.4 757,358 - -0.1 757,358 - -0.7 757,358 - -0.6 757,358 - -1.2 757,358 - +0.6
Or see this region's nucleotide sequence