Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00471 and MPMX19_00472 are separated by 71 nucleotides MPMX19_00472 and MPMX19_00473 are separated by 312 nucleotides
MPMX19_00471: MPMX19_00471 - hypothetical protein, at 469,857 to 470,780
_00471
MPMX19_00472: MPMX19_00472 - Protein HesB, heterocyst, at 470,852 to 471,247
_00472
MPMX19_00473: MPMX19_00473 - hypothetical protein, at 471,560 to 472,072
_00473
Position (kb) 470
471
472 Strain fitness (log2 ratio) -2
-1
0
1
2 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.996 kb on + strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 469.997 kb on - strand, within MPMX19_00471 at 470.287 kb on + strand, within MPMX19_00471 at 470.287 kb on + strand, within MPMX19_00471 at 470.287 kb on + strand, within MPMX19_00471 at 470.287 kb on + strand, within MPMX19_00471 at 470.287 kb on + strand, within MPMX19_00471 at 470.287 kb on + strand, within MPMX19_00471 at 470.287 kb on + strand, within MPMX19_00471 at 470.287 kb on + strand, within MPMX19_00471 at 470.288 kb on - strand, within MPMX19_00471 at 470.288 kb on - strand, within MPMX19_00471 at 470.288 kb on - strand, within MPMX19_00471 at 470.288 kb on - strand, within MPMX19_00471 at 470.288 kb on - strand, within MPMX19_00471 at 470.288 kb on - strand, within MPMX19_00471 at 470.288 kb on - strand, within MPMX19_00471 at 470.288 kb on - strand, within MPMX19_00471 at 470.288 kb on - strand, within MPMX19_00471 at 470.288 kb on - strand, within MPMX19_00471 at 470.288 kb on - strand, within MPMX19_00471 at 470.288 kb on - strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.419 kb on + strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.420 kb on - strand, within MPMX19_00471 at 470.497 kb on + strand, within MPMX19_00471 at 470.497 kb on + strand, within MPMX19_00471 at 470.497 kb on + strand, within MPMX19_00471 at 470.498 kb on - strand, within MPMX19_00471 at 470.498 kb on - strand, within MPMX19_00471 at 470.498 kb on - strand, within MPMX19_00471 at 470.498 kb on - strand, within MPMX19_00471 at 470.498 kb on - strand, within MPMX19_00471 at 470.770 kb on + strand at 470.770 kb on + strand at 470.770 kb on + strand at 470.771 kb on - strand at 470.771 kb on - strand at 470.771 kb on - strand at 470.771 kb on - strand at 470.771 kb on - strand at 470.771 kb on - strand at 470.771 kb on - strand at 470.771 kb on - strand at 470.865 kb on + strand at 470.865 kb on + strand at 470.865 kb on + strand at 470.866 kb on - strand at 470.866 kb on - strand at 470.866 kb on - strand at 470.866 kb on - strand at 471.129 kb on + strand, within MPMX19_00472 at 471.129 kb on + strand, within MPMX19_00472 at 471.129 kb on + strand, within MPMX19_00472 at 471.129 kb on + strand, within MPMX19_00472 at 471.129 kb on + strand, within MPMX19_00472 at 471.130 kb on - strand, within MPMX19_00472 at 471.130 kb on - strand, within MPMX19_00472 at 471.301 kb on + strand at 471.302 kb on - strand at 471.302 kb on - strand at 471.302 kb on - strand at 471.302 kb on - strand at 471.490 kb on + strand at 471.490 kb on + strand at 471.490 kb on + strand at 471.490 kb on + strand at 471.490 kb on + strand at 471.490 kb on + strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.737 kb on + strand, within MPMX19_00473 at 471.737 kb on + strand, within MPMX19_00473 at 471.737 kb on + strand, within MPMX19_00473 at 471.738 kb on - strand, within MPMX19_00473 at 471.738 kb on - strand, within MPMX19_00473 at 471.738 kb on - strand, within MPMX19_00473 at 471.746 kb on + strand, within MPMX19_00473 at 471.747 kb on - strand, within MPMX19_00473 at 471.755 kb on + strand, within MPMX19_00473 at 471.755 kb on + strand, within MPMX19_00473 at 471.755 kb on + strand, within MPMX19_00473 at 471.755 kb on + strand, within MPMX19_00473 at 471.755 kb on + strand, within MPMX19_00473 at 471.755 kb on + strand, within MPMX19_00473 at 471.756 kb on - strand, within MPMX19_00473 at 471.756 kb on - strand, within MPMX19_00473 at 471.756 kb on - strand, within MPMX19_00473 at 472.087 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 469,996 + MPMX19_00471 0.15 -0.1 469,996 + MPMX19_00471 0.15 -1.0 469,996 + MPMX19_00471 0.15 -1.0 469,996 + MPMX19_00471 0.15 -1.1 469,996 + MPMX19_00471 0.15 +0.3 469,996 + MPMX19_00471 0.15 -1.2 469,996 + MPMX19_00471 0.15 -0.2 469,996 + MPMX19_00471 0.15 -1.2 469,996 + MPMX19_00471 0.15 -0.5 469,996 + MPMX19_00471 0.15 +0.8 469,996 + MPMX19_00471 0.15 -0.9 469,996 + MPMX19_00471 0.15 -1.0 469,996 + MPMX19_00471 0.15 -2.0 469,996 + MPMX19_00471 0.15 -1.1 469,996 + MPMX19_00471 0.15 +0.1 469,996 + MPMX19_00471 0.15 +0.3 469,996 + MPMX19_00471 0.15 +0.7 469,996 + MPMX19_00471 0.15 -1.1 469,996 + MPMX19_00471 0.15 +0.7 469,996 + MPMX19_00471 0.15 +0.2 469,996 + MPMX19_00471 0.15 -0.2 469,996 + MPMX19_00471 0.15 -0.5 469,996 + MPMX19_00471 0.15 +0.1 469,996 + MPMX19_00471 0.15 -0.5 469,996 + MPMX19_00471 0.15 +1.5 469,996 + MPMX19_00471 0.15 -0.2 469,996 + MPMX19_00471 0.15 -0.1 469,996 + MPMX19_00471 0.15 -1.1 469,996 + MPMX19_00471 0.15 +0.5 469,996 + MPMX19_00471 0.15 -0.8 469,996 + MPMX19_00471 0.15 -0.1 469,996 + MPMX19_00471 0.15 -0.7 469,996 + MPMX19_00471 0.15 -1.1 469,996 + MPMX19_00471 0.15 -0.0 469,996 + MPMX19_00471 0.15 -0.2 469,996 + MPMX19_00471 0.15 -0.4 469,996 + MPMX19_00471 0.15 -1.3 469,996 + MPMX19_00471 0.15 -1.6 469,996 + MPMX19_00471 0.15 -0.0 469,997 - MPMX19_00471 0.15 -1.8 469,997 - MPMX19_00471 0.15 -0.6 469,997 - MPMX19_00471 0.15 +0.3 469,997 - MPMX19_00471 0.15 -0.0 469,997 - MPMX19_00471 0.15 -0.8 469,997 - MPMX19_00471 0.15 -1.5 469,997 - MPMX19_00471 0.15 -1.1 469,997 - MPMX19_00471 0.15 -1.4 469,997 - MPMX19_00471 0.15 +1.3 469,997 - MPMX19_00471 0.15 -0.5 469,997 - MPMX19_00471 0.15 -1.7 469,997 - MPMX19_00471 0.15 -0.1 469,997 - MPMX19_00471 0.15 -0.6 469,997 - MPMX19_00471 0.15 -0.2 469,997 - MPMX19_00471 0.15 -0.5 469,997 - MPMX19_00471 0.15 -0.8 469,997 - MPMX19_00471 0.15 -1.4 469,997 - MPMX19_00471 0.15 +0.3 469,997 - MPMX19_00471 0.15 -0.6 469,997 - MPMX19_00471 0.15 -0.2 469,997 - MPMX19_00471 0.15 -0.4 469,997 - MPMX19_00471 0.15 +1.2 469,997 - MPMX19_00471 0.15 -1.1 469,997 - MPMX19_00471 0.15 -0.2 469,997 - MPMX19_00471 0.15 -0.2 469,997 - MPMX19_00471 0.15 -0.9 469,997 - MPMX19_00471 0.15 -1.1 469,997 - MPMX19_00471 0.15 +0.2 469,997 - MPMX19_00471 0.15 +1.1 469,997 - MPMX19_00471 0.15 +0.2 469,997 - MPMX19_00471 0.15 -0.1 469,997 - MPMX19_00471 0.15 -0.2 469,997 - MPMX19_00471 0.15 -1.3 470,287 + MPMX19_00471 0.47 -2.2 470,287 + MPMX19_00471 0.47 -1.4 470,287 + MPMX19_00471 0.47 -1.5 470,287 + MPMX19_00471 0.47 -0.4 470,287 + MPMX19_00471 0.47 -2.2 470,287 + MPMX19_00471 0.47 -1.7 470,287 + MPMX19_00471 0.47 -1.1 470,287 + MPMX19_00471 0.47 -2.1 470,288 - MPMX19_00471 0.47 -0.2 470,288 - MPMX19_00471 0.47 -1.3 470,288 - MPMX19_00471 0.47 +1.4 470,288 - MPMX19_00471 0.47 -0.5 470,288 - MPMX19_00471 0.47 -0.4 470,288 - MPMX19_00471 0.47 -2.7 470,288 - MPMX19_00471 0.47 +0.9 470,288 - MPMX19_00471 0.47 +0.3 470,288 - MPMX19_00471 0.47 -1.2 470,288 - MPMX19_00471 0.47 +0.9 470,288 - MPMX19_00471 0.47 -1.3 470,288 - MPMX19_00471 0.47 -0.7 470,419 + MPMX19_00471 0.61 -1.0 470,419 + MPMX19_00471 0.61 -0.5 470,419 + MPMX19_00471 0.61 -1.6 470,419 + MPMX19_00471 0.61 +0.1 470,419 + MPMX19_00471 0.61 +0.9 470,419 + MPMX19_00471 0.61 +0.1 470,419 + MPMX19_00471 0.61 -1.0 470,419 + MPMX19_00471 0.61 -0.0 470,419 + MPMX19_00471 0.61 -0.7 470,419 + MPMX19_00471 0.61 +1.2 470,419 + MPMX19_00471 0.61 -2.0 470,419 + MPMX19_00471 0.61 -0.8 470,419 + MPMX19_00471 0.61 +0.3 470,419 + MPMX19_00471 0.61 -1.4 470,419 + MPMX19_00471 0.61 +0.1 470,419 + MPMX19_00471 0.61 -1.6 470,419 + MPMX19_00471 0.61 -0.2 470,419 + MPMX19_00471 0.61 -0.6 470,419 + MPMX19_00471 0.61 -0.5 470,419 + MPMX19_00471 0.61 -2.2 470,419 + MPMX19_00471 0.61 +1.1 470,419 + MPMX19_00471 0.61 -0.3 470,419 + MPMX19_00471 0.61 +1.8 470,419 + MPMX19_00471 0.61 -2.4 470,419 + MPMX19_00471 0.61 -0.1 470,419 + MPMX19_00471 0.61 +1.1 470,419 + MPMX19_00471 0.61 -0.3 470,419 + MPMX19_00471 0.61 -1.6 470,419 + MPMX19_00471 0.61 -0.6 470,419 + MPMX19_00471 0.61 +1.8 470,419 + MPMX19_00471 0.61 -0.2 470,419 + MPMX19_00471 0.61 -0.5 470,419 + MPMX19_00471 0.61 -1.3 470,419 + MPMX19_00471 0.61 -1.6 470,419 + MPMX19_00471 0.61 -0.1 470,419 + MPMX19_00471 0.61 -1.1 470,420 - MPMX19_00471 0.61 +0.1 470,420 - MPMX19_00471 0.61 -0.9 470,420 - MPMX19_00471 0.61 +0.1 470,420 - MPMX19_00471 0.61 -0.6 470,420 - MPMX19_00471 0.61 +1.1 470,420 - MPMX19_00471 0.61 +0.9 470,420 - MPMX19_00471 0.61 +0.7 470,420 - MPMX19_00471 0.61 +0.8 470,420 - MPMX19_00471 0.61 -0.9 470,420 - MPMX19_00471 0.61 -0.3 470,420 - MPMX19_00471 0.61 -0.3 470,420 - MPMX19_00471 0.61 -1.5 470,420 - MPMX19_00471 0.61 +0.3 470,420 - MPMX19_00471 0.61 -1.3 470,420 - MPMX19_00471 0.61 -1.9 470,420 - MPMX19_00471 0.61 -0.2 470,420 - MPMX19_00471 0.61 -1.1 470,420 - MPMX19_00471 0.61 +0.3 470,420 - MPMX19_00471 0.61 +0.1 470,420 - MPMX19_00471 0.61 -1.0 470,497 + MPMX19_00471 0.69 -1.1 470,497 + MPMX19_00471 0.69 -1.9 470,497 + MPMX19_00471 0.69 +0.4 470,498 - MPMX19_00471 0.69 -0.4 470,498 - MPMX19_00471 0.69 -1.1 470,498 - MPMX19_00471 0.69 +0.8 470,498 - MPMX19_00471 0.69 -0.4 470,498 - MPMX19_00471 0.69 +0.5 470,770 + -0.2 470,770 + -0.4 470,770 + -1.5 470,771 - -0.2 470,771 - +0.6 470,771 - +0.1 470,771 - -1.0 470,771 - -0.5 470,771 - -0.0 470,771 - -1.2 470,771 - -0.5 470,865 + -1.3 470,865 + +1.3 470,865 + -0.1 470,866 - -0.4 470,866 - +0.1 470,866 - +0.8 470,866 - -1.6 471,129 + MPMX19_00472 0.70 -0.9 471,129 + MPMX19_00472 0.70 -2.0 471,129 + MPMX19_00472 0.70 +1.1 471,129 + MPMX19_00472 0.70 -0.7 471,129 + MPMX19_00472 0.70 -0.7 471,130 - MPMX19_00472 0.70 -0.6 471,130 - MPMX19_00472 0.70 +1.1 471,301 + +0.0 471,302 - +0.7 471,302 - +1.9 471,302 - -1.0 471,302 - -0.9 471,490 + +0.3 471,490 + -0.4 471,490 + -1.6 471,490 + +1.1 471,490 + -0.5 471,490 + -0.8 471,491 - -0.5 471,491 - -0.1 471,491 - -0.8 471,491 - +1.0 471,491 - -0.5 471,491 - +0.5 471,491 - -0.2 471,491 - -0.5 471,491 - +0.5 471,737 + MPMX19_00473 0.35 -0.5 471,737 + MPMX19_00473 0.35 -1.5 471,737 + MPMX19_00473 0.35 -1.1 471,738 - MPMX19_00473 0.35 +0.1 471,738 - MPMX19_00473 0.35 +0.1 471,738 - MPMX19_00473 0.35 -0.5 471,746 + MPMX19_00473 0.36 +0.3 471,747 - MPMX19_00473 0.36 -0.1 471,755 + MPMX19_00473 0.38 -1.5 471,755 + MPMX19_00473 0.38 +0.6 471,755 + MPMX19_00473 0.38 +0.1 471,755 + MPMX19_00473 0.38 -1.0 471,755 + MPMX19_00473 0.38 -1.2 471,755 + MPMX19_00473 0.38 -0.5 471,756 - MPMX19_00473 0.38 +0.7 471,756 - MPMX19_00473 0.38 +0.3 471,756 - MPMX19_00473 0.38 -1.4 472,087 + -0.4
Or see this region's nucleotide sequence