Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00455 and MPMX19_00456 are separated by 14 nucleotides MPMX19_00456 and MPMX19_00457 overlap by 17 nucleotides MPMX19_00457 and MPMX19_00458 are separated by 34 nucleotides
MPMX19_00455: MPMX19_00455 - 3-deoxy-D-manno-octulosonic acid transferase, at 453,113 to 454,399
_00455
MPMX19_00456: MPMX19_00456 - Tetraacyldisaccharide 4'-kinase, at 454,414 to 455,412
_00456
MPMX19_00457: MPMX19_00457 - Lipid A biosynthesis palmitoleoyltransferase, at 455,396 to 456,292
_00457
MPMX19_00458: MPMX19_00458 - Leucine efflux protein, at 456,327 to 456,989
_00458
Position (kb) 454
455
456 Strain fitness (log2 ratio) -2
-1
0
1
2 at 456.362 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.363 kb on + strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.364 kb on - strand at 456.365 kb on + strand at 456.365 kb on + strand at 456.365 kb on + strand at 456.365 kb on + strand at 456.365 kb on + strand at 456.365 kb on + strand at 456.366 kb on - strand at 456.366 kb on - strand at 456.366 kb on - strand at 456.366 kb on - strand at 456.366 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 456,362 + -1.2 456,363 + -1.1 456,363 + -0.4 456,363 + -0.9 456,363 + -0.1 456,363 + +0.7 456,363 + +0.6 456,363 + +0.9 456,363 + -0.6 456,363 + +0.3 456,363 + -1.0 456,363 + -0.5 456,363 + -1.2 456,363 + -0.4 456,363 + +1.5 456,363 + -0.1 456,363 + -0.2 456,363 + -0.0 456,363 + -0.5 456,363 + -1.3 456,363 + -0.7 456,363 + -1.3 456,363 + -0.7 456,363 + +0.3 456,363 + +0.1 456,363 + -0.5 456,363 + +1.1 456,363 + -0.7 456,363 + -0.9 456,363 + -0.7 456,363 + -0.0 456,363 + +0.3 456,363 + -0.6 456,363 + +1.0 456,364 - +0.5 456,364 - -0.7 456,364 - -0.2 456,364 - -1.4 456,364 - -1.2 456,364 - -0.2 456,364 - -0.0 456,364 - -0.1 456,364 - -1.2 456,364 - -1.0 456,364 - +0.3 456,364 - -0.7 456,364 - -0.7 456,364 - +0.6 456,364 - -1.2 456,364 - -0.2 456,364 - +1.5 456,364 - +0.3 456,364 - -0.9 456,364 - -0.2 456,364 - +0.3 456,364 - +0.3 456,364 - +0.8 456,364 - -0.7 456,364 - -0.3 456,364 - -0.2 456,364 - -1.1 456,364 - -2.1 456,364 - -1.4 456,364 - -1.4 456,364 - -1.6 456,364 - +0.3 456,364 - -0.5 456,364 - -1.8 456,364 - -1.2 456,364 - -0.3 456,364 - +2.1 456,364 - +0.3 456,364 - -0.2 456,364 - -0.7 456,364 - -0.7 456,364 - -0.9 456,364 - -0.4 456,364 - -0.6 456,364 - -2.6 456,365 + -1.1 456,365 + +0.9 456,365 + +0.1 456,365 + +0.5 456,365 + +2.5 456,365 + -0.9 456,366 - -0.9 456,366 - -0.2 456,366 - -0.4 456,366 - -1.1 456,366 - -0.7
Or see this region's nucleotide sequence