Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00006

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
5,647	-		MPMX19_00005	0.26	-2.0
5,703	+		MPMX19_00005	0.31	-1.7
5,841	+		MPMX19_00005	0.44	-0.4
5,842	-		MPMX19_00005	0.44	-0.6
5,842	-		MPMX19_00005	0.44	+0.9
5,895	+		MPMX19_00005	0.49	-2.1
5,895	+		MPMX19_00005	0.49	+1.2
5,895	+		MPMX19_00005	0.49	+0.4
5,896	-		MPMX19_00005	0.49	+0.6
5,896	-		MPMX19_00005	0.49	-0.6
6,476	+				+0.2
6,516	-				-0.6
6,516	-				+0.7
6,516	-				+0.7
6,678	+		MPMX19_00006	0.27	-2.3
6,679	-		MPMX19_00006	0.27	+0.2
6,726	+		MPMX19_00006	0.38	+0.1
6,726	+		MPMX19_00006	0.38	-0.1
6,726	+		MPMX19_00006	0.38	+1.2
6,726	+		MPMX19_00006	0.38	-0.9
6,727	-		MPMX19_00006	0.38	-0.6
6,727	-		MPMX19_00006	0.38	+0.2
6,933	+		MPMX19_00006	0.85	-0.8
6,933	+		MPMX19_00006	0.85	-2.0
6,933	+		MPMX19_00006	0.85	-0.6
6,933	+		MPMX19_00006	0.85	-1.7
6,934	-		MPMX19_00006	0.85	-2.2
6,934	-		MPMX19_00006	0.85	+0.8
6,934	-		MPMX19_00006	0.85	-2.5
7,027	+				-1.1
7,027	+				+0.2
7,027	+				+0.3
7,027	+				+0.8
7,027	+				+1.4
7,027	+				+0.2
7,027	+				-0.7
7,027	+				+0.4
7,028	-				-0.4
7,028	-				-0.5
7,028	-				+0.2
7,028	-				+0.0
7,045	+				-0.6
7,045	+				-0.4
7,045	+				-0.2
7,045	+				+0.3
7,045	+				+1.7
7,045	+				-1.2
7,045	+				-0.4
7,045	+				-1.3
7,045	+				-1.6
7,045	+				-0.6
7,045	+				-0.0
7,045	+				-1.3
7,045	+				+1.7
7,045	+				-0.5
7,045	+				-0.6
7,045	+				-0.6
7,045	+				-0.0
7,045	+				-0.5
7,045	+				-1.3
7,045	+				-1.7
7,045	+				-1.2
7,045	+				+0.2
7,045	+				+0.7
7,045	+				-0.6
7,045	+				-0.5
7,045	+				+3.2
7,045	+				-1.6
7,045	+				-0.8
7,045	+				-0.9
7,045	+				-0.2
7,045	+				-0.6
7,046	-				-0.8
7,046	-				+0.2
7,046	-				-0.4
7,046	-				-1.3
7,046	-				-0.8
7,046	-				-1.7
7,046	-				+0.2
7,046	-				+0.1
7,046	-				-1.3
7,046	-				+0.8
7,046	-				-0.7
7,046	-				+0.8
7,046	-				-0.2
7,046	-				-0.5
7,046	-				-1.9
7,046	-				+0.2
7,046	-				-1.3
7,046	-				-0.3
7,046	-				+0.9
7,046	-				-1.2
7,046	-				-3.2
7,046	-				-1.4
7,046	-				+0.4
7,046	-				-0.8
7,046	-				+0.9
7,046	-				-1.4
7,046	-				+1.2
7,046	-				-0.4
7,046	-				-0.4
7,046	-				-0.1
7,046	-				-0.0
7,046	-				-0.8
7,046	-				-0.2
7,177	+				-1.5
7,177	+				-3.1
7,177	+				+0.1
7,177	+				-0.6
7,178	-				-0.4
7,178	-				-1.5
7,178	-				-0.7
7,178	-				-1.6
7,178	-				-2.0
7,178	-				-0.6
7,178	-				-0.5
7,178	-				-1.6
7,178	-				-1.4
7,513	+		MPMX19_00007	0.19	-1.7
7,513	+		MPMX19_00007	0.19	-0.2
7,513	+		MPMX19_00007	0.19	+0.1
7,513	+		MPMX19_00007	0.19	-0.4
7,513	+		MPMX19_00007	0.19	-0.4
7,513	+		MPMX19_00007	0.19	-0.5
7,514	-		MPMX19_00007	0.19	-0.7
7,514	-		MPMX19_00007	0.19	+0.9
7,514	-		MPMX19_00007	0.19	+0.9