Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF581 and GFF582 are separated by 170 nucleotides GFF582 and GFF583 are separated by 83 nucleotides GFF583 and GFF584 are separated by 10 nucleotides
GFF581 - Adaptive-response sensory-kinase SasA, at 647,873 to 649,408
GFF581
GFF582 - hypothetical protein, at 649,579 to 650,358
GFF582
GFF583 - D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase, at 650,442 to 650,975
GFF583
GFF584 - Glycine--tRNA ligase beta subunit, at 650,986 to 653,040
GFF584
Position (kb) 649
650
651 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 648.938 kb on + strand, within GFF581 at 648.939 kb on - strand, within GFF581 at 648.957 kb on + strand, within GFF581 at 648.958 kb on - strand, within GFF581 at 648.958 kb on - strand, within GFF581 at 648.973 kb on - strand, within GFF581 at 649.127 kb on + strand, within GFF581 at 649.127 kb on + strand, within GFF581 at 649.127 kb on + strand, within GFF581 at 649.127 kb on + strand, within GFF581 at 649.127 kb on + strand, within GFF581 at 649.128 kb on - strand, within GFF581 at 649.128 kb on - strand, within GFF581 at 649.128 kb on - strand, within GFF581 at 649.432 kb on + strand at 649.435 kb on - strand at 649.718 kb on + strand, within GFF582 at 649.719 kb on - strand, within GFF582 at 649.806 kb on + strand, within GFF582 at 650.036 kb on + strand, within GFF582 at 650.036 kb on + strand, within GFF582 at 650.078 kb on + strand, within GFF582 at 650.079 kb on - strand, within GFF582 at 650.321 kb on + strand at 650.322 kb on - strand at 650.438 kb on + strand at 650.439 kb on - strand at 650.439 kb on - strand at 650.439 kb on - strand at 650.444 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 648,938 + GFF581 0.69 +0.8 648,939 - GFF581 0.69 +1.6 648,957 + GFF581 0.71 -0.4 648,958 - GFF581 0.71 -0.3 648,958 - GFF581 0.71 +0.2 648,973 - GFF581 0.72 -0.3 649,127 + GFF581 0.82 +0.1 649,127 + GFF581 0.82 -0.0 649,127 + GFF581 0.82 +0.5 649,127 + GFF581 0.82 -0.0 649,127 + GFF581 0.82 +0.4 649,128 - GFF581 0.82 -0.2 649,128 - GFF581 0.82 -0.8 649,128 - GFF581 0.82 -2.8 649,432 + +0.4 649,435 - -0.7 649,718 + GFF582 0.18 -0.5 649,719 - GFF582 0.18 -1.2 649,806 + GFF582 0.29 +0.6 650,036 + GFF582 0.59 -0.8 650,036 + GFF582 0.59 -0.5 650,078 + GFF582 0.64 +0.5 650,079 - GFF582 0.64 -0.5 650,321 + +1.4 650,322 - +0.6 650,438 + -0.2 650,439 - +1.3 650,439 - -0.8 650,439 - -2.9 650,444 - -1.2
Or see this region's nucleotide sequence