Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5149 and GFF5150 overlap by 11 nucleotides GFF5150 and GFF5151 are separated by 174 nucleotides
GFF5149 - Adaptive-response sensory-kinase SasA, at 21,857 to 23,326
GFF5149
GFF5150 - Transcriptional regulatory protein OmpR, at 23,316 to 24,047
GFF5150
GFF5151 - Glucokinase, at 24,222 to 25,181
GFF5151
Position (kb) 23
24
25 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 22.684 kb on + strand, within GFF5149 at 22.731 kb on + strand, within GFF5149 at 22.758 kb on + strand, within GFF5149 at 22.758 kb on + strand, within GFF5149 at 22.758 kb on + strand, within GFF5149 at 22.759 kb on - strand, within GFF5149 at 22.759 kb on - strand, within GFF5149 at 22.759 kb on - strand, within GFF5149 at 22.759 kb on - strand, within GFF5149 at 22.834 kb on - strand, within GFF5149 at 23.115 kb on + strand, within GFF5149 at 23.116 kb on - strand, within GFF5149 at 23.734 kb on + strand, within GFF5150 at 23.734 kb on + strand, within GFF5150 at 23.734 kb on + strand, within GFF5150 at 23.977 kb on + strand at 23.977 kb on + strand at 23.978 kb on - strand at 23.997 kb on + strand at 23.998 kb on - strand at 24.024 kb on + strand at 24.025 kb on - strand at 24.025 kb on - strand at 24.084 kb on + strand at 24.085 kb on - strand at 24.085 kb on - strand at 24.085 kb on - strand at 24.223 kb on + strand at 24.224 kb on - strand at 24.313 kb on + strand at 24.313 kb on + strand at 24.314 kb on - strand at 24.314 kb on - strand at 24.646 kb on + strand, within GFF5151 at 24.646 kb on + strand, within GFF5151 at 24.646 kb on + strand, within GFF5151 at 24.647 kb on - strand, within GFF5151 at 24.647 kb on - strand, within GFF5151 at 24.647 kb on - strand, within GFF5151 at 24.647 kb on - strand, within GFF5151 at 24.647 kb on - strand, within GFF5151 at 24.647 kb on - strand, within GFF5151
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 22,684 + GFF5149 0.56 +0.8 22,731 + GFF5149 0.59 +0.0 22,758 + GFF5149 0.61 -0.9 22,758 + GFF5149 0.61 +0.8 22,758 + GFF5149 0.61 +0.6 22,759 - GFF5149 0.61 +0.9 22,759 - GFF5149 0.61 -0.2 22,759 - GFF5149 0.61 +0.4 22,759 - GFF5149 0.61 -0.4 22,834 - GFF5149 0.66 +0.8 23,115 + GFF5149 0.86 +0.1 23,116 - GFF5149 0.86 +0.5 23,734 + GFF5150 0.57 -0.4 23,734 + GFF5150 0.57 -0.2 23,734 + GFF5150 0.57 -2.6 23,977 + -1.0 23,977 + -0.3 23,978 - +0.6 23,997 + +0.7 23,998 - -0.8 24,024 + +2.0 24,025 - +0.3 24,025 - +0.4 24,084 + +0.2 24,085 - +2.9 24,085 - -0.2 24,085 - +0.5 24,223 + +0.4 24,224 - +0.2 24,313 + -0.7 24,313 + -0.9 24,314 - +1.4 24,314 - -1.9 24,646 + GFF5151 0.44 -0.3 24,646 + GFF5151 0.44 -0.5 24,646 + GFF5151 0.44 -0.2 24,647 - GFF5151 0.44 -0.4 24,647 - GFF5151 0.44 -0.0 24,647 - GFF5151 0.44 -0.8 24,647 - GFF5151 0.44 +0.5 24,647 - GFF5151 0.44 -0.3 24,647 - GFF5151 0.44 -3.0
Or see this region's nucleotide sequence