Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4816 and GFF4817 are separated by 26 nucleotides GFF4817 and GFF4818 are separated by 130 nucleotides GFF4818 and GFF4819 are separated by 101 nucleotides
GFF4816 - hypothetical protein, at 80,155 to 80,697
GFF4816
GFF4817 - Nucleoside triphosphate pyrophosphohydrolase, at 80,724 to 81,560
GFF4817
GFF4818 - GTP pyrophosphokinase, at 81,691 to 83,934
GFF4818
GFF4819 - 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD, at 84,036 to 85,412
GFF4819
Position (kb) 81
82
83
84 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 80.705 kb on + strand at 80.840 kb on + strand, within GFF4817 at 80.867 kb on + strand, within GFF4817 at 80.867 kb on + strand, within GFF4817 at 81.242 kb on - strand, within GFF4817 at 81.352 kb on + strand, within GFF4817 at 81.353 kb on - strand, within GFF4817 at 81.355 kb on + strand, within GFF4817 at 81.355 kb on + strand, within GFF4817 at 81.356 kb on - strand, within GFF4817 at 81.356 kb on - strand, within GFF4817 at 81.356 kb on - strand, within GFF4817 at 81.436 kb on + strand, within GFF4817 at 81.436 kb on + strand, within GFF4817 at 81.436 kb on + strand, within GFF4817 at 81.472 kb on + strand, within GFF4817 at 81.472 kb on + strand, within GFF4817 at 81.473 kb on - strand, within GFF4817 at 81.553 kb on + strand at 81.553 kb on + strand at 81.553 kb on + strand at 81.553 kb on + strand at 81.553 kb on + strand at 81.553 kb on + strand at 81.554 kb on - strand at 81.554 kb on - strand at 81.554 kb on - strand at 81.554 kb on - strand at 81.554 kb on - strand at 81.905 kb on + strand at 81.905 kb on + strand at 81.906 kb on - strand at 81.932 kb on + strand, within GFF4818 at 82.056 kb on - strand, within GFF4818 at 82.056 kb on - strand, within GFF4818 at 82.056 kb on - strand, within GFF4818 at 82.056 kb on - strand, within GFF4818 at 82.547 kb on + strand, within GFF4818 at 82.547 kb on + strand, within GFF4818 at 82.686 kb on - strand, within GFF4818 at 82.686 kb on - strand, within GFF4818 at 82.686 kb on - strand, within GFF4818 at 82.686 kb on - strand, within GFF4818 at 82.796 kb on + strand, within GFF4818 at 82.796 kb on + strand, within GFF4818 at 82.973 kb on + strand, within GFF4818 at 82.973 kb on + strand, within GFF4818 at 82.973 kb on + strand, within GFF4818 at 82.973 kb on + strand, within GFF4818 at 82.974 kb on - strand, within GFF4818 at 83.033 kb on + strand, within GFF4818 at 83.034 kb on - strand, within GFF4818 at 83.081 kb on + strand, within GFF4818 at 83.081 kb on + strand, within GFF4818 at 83.081 kb on + strand, within GFF4818 at 83.132 kb on + strand, within GFF4818 at 83.270 kb on + strand, within GFF4818 at 83.270 kb on + strand, within GFF4818 at 83.271 kb on - strand, within GFF4818 at 83.271 kb on - strand, within GFF4818 at 83.289 kb on - strand, within GFF4818 at 83.357 kb on + strand, within GFF4818 at 83.357 kb on + strand, within GFF4818 at 83.357 kb on + strand, within GFF4818 at 83.358 kb on - strand, within GFF4818 at 83.358 kb on - strand, within GFF4818 at 83.358 kb on - strand, within GFF4818 at 83.358 kb on - strand, within GFF4818 at 83.358 kb on - strand, within GFF4818 at 83.358 kb on - strand, within GFF4818 at 83.638 kb on + strand, within GFF4818 at 83.663 kb on + strand, within GFF4818 at 83.889 kb on + strand at 83.889 kb on + strand at 83.890 kb on - strand at 83.890 kb on - strand at 83.890 kb on - strand at 83.929 kb on + strand at 83.930 kb on - strand at 83.942 kb on + strand at 83.942 kb on + strand at 83.943 kb on - strand at 83.943 kb on - strand at 83.943 kb on - strand at 83.952 kb on - strand at 84.076 kb on - strand at 84.114 kb on - strand at 84.202 kb on + strand, within GFF4819 at 84.202 kb on + strand, within GFF4819 at 84.202 kb on + strand, within GFF4819 at 84.202 kb on + strand, within GFF4819 at 84.202 kb on + strand, within GFF4819 at 84.202 kb on + strand, within GFF4819 at 84.203 kb on - strand, within GFF4819 at 84.203 kb on - strand, within GFF4819 at 84.203 kb on - strand, within GFF4819 at 84.203 kb on - strand, within GFF4819 at 84.203 kb on - strand, within GFF4819 at 84.203 kb on - strand, within GFF4819 at 84.203 kb on - strand, within GFF4819 at 84.203 kb on - strand, within GFF4819 at 84.203 kb on - strand, within GFF4819 at 84.203 kb on - strand, within GFF4819 at 84.204 kb on + strand, within GFF4819 at 84.204 kb on + strand, within GFF4819 at 84.204 kb on + strand, within GFF4819 at 84.205 kb on - strand, within GFF4819 at 84.331 kb on - strand, within GFF4819 at 84.331 kb on - strand, within GFF4819 at 84.357 kb on - strand, within GFF4819 at 84.757 kb on - strand, within GFF4819 at 84.864 kb on + strand, within GFF4819 at 84.865 kb on - strand, within GFF4819 at 84.865 kb on - strand, within GFF4819
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 80,705 + +0.1 80,840 + GFF4817 0.14 +0.1 80,867 + GFF4817 0.17 -0.5 80,867 + GFF4817 0.17 -0.1 81,242 - GFF4817 0.62 -1.5 81,352 + GFF4817 0.75 -0.3 81,353 - GFF4817 0.75 -1.7 81,355 + GFF4817 0.75 +0.3 81,355 + GFF4817 0.75 -0.7 81,356 - GFF4817 0.76 +0.8 81,356 - GFF4817 0.76 -0.3 81,356 - GFF4817 0.76 -0.6 81,436 + GFF4817 0.85 +0.4 81,436 + GFF4817 0.85 -0.1 81,436 + GFF4817 0.85 +0.3 81,472 + GFF4817 0.89 -1.0 81,472 + GFF4817 0.89 -0.8 81,473 - GFF4817 0.89 -0.8 81,553 + +0.4 81,553 + -0.6 81,553 + +0.9 81,553 + -0.2 81,553 + +0.6 81,553 + -0.2 81,554 - -1.0 81,554 - -0.7 81,554 - +0.1 81,554 - +0.3 81,554 - +0.7 81,905 + -3.2 81,905 + -0.3 81,906 - +1.2 81,932 + GFF4818 0.11 -1.8 82,056 - GFF4818 0.16 -0.6 82,056 - GFF4818 0.16 -3.0 82,056 - GFF4818 0.16 -2.0 82,056 - GFF4818 0.16 -3.4 82,547 + GFF4818 0.38 -1.4 82,547 + GFF4818 0.38 -2.0 82,686 - GFF4818 0.44 -1.7 82,686 - GFF4818 0.44 -2.7 82,686 - GFF4818 0.44 -2.9 82,686 - GFF4818 0.44 -1.5 82,796 + GFF4818 0.49 -2.2 82,796 + GFF4818 0.49 -1.5 82,973 + GFF4818 0.57 +0.0 82,973 + GFF4818 0.57 -1.0 82,973 + GFF4818 0.57 -1.0 82,973 + GFF4818 0.57 -4.4 82,974 - GFF4818 0.57 -2.7 83,033 + GFF4818 0.60 -2.5 83,034 - GFF4818 0.60 -1.0 83,081 + GFF4818 0.62 -2.5 83,081 + GFF4818 0.62 -2.9 83,081 + GFF4818 0.62 -0.4 83,132 + GFF4818 0.64 -2.8 83,270 + GFF4818 0.70 -1.6 83,270 + GFF4818 0.70 -1.6 83,271 - GFF4818 0.70 -2.6 83,271 - GFF4818 0.70 -1.9 83,289 - GFF4818 0.71 -3.3 83,357 + GFF4818 0.74 -2.1 83,357 + GFF4818 0.74 -0.7 83,357 + GFF4818 0.74 -2.6 83,358 - GFF4818 0.74 -1.0 83,358 - GFF4818 0.74 -2.2 83,358 - GFF4818 0.74 -1.4 83,358 - GFF4818 0.74 -0.3 83,358 - GFF4818 0.74 -2.5 83,358 - GFF4818 0.74 -2.4 83,638 + GFF4818 0.87 -1.4 83,663 + GFF4818 0.88 -2.2 83,889 + -3.8 83,889 + -2.9 83,890 - -0.4 83,890 - -0.7 83,890 - -2.3 83,929 + -1.2 83,930 - -0.1 83,942 + -2.7 83,942 + -1.3 83,943 - -0.4 83,943 - -1.0 83,943 - -2.7 83,952 - -1.0 84,076 - +0.6 84,114 - +0.3 84,202 + GFF4819 0.12 +0.1 84,202 + GFF4819 0.12 +0.0 84,202 + GFF4819 0.12 +0.3 84,202 + GFF4819 0.12 -0.6 84,202 + GFF4819 0.12 -1.7 84,202 + GFF4819 0.12 -1.5 84,203 - GFF4819 0.12 +0.4 84,203 - GFF4819 0.12 -0.5 84,203 - GFF4819 0.12 +0.1 84,203 - GFF4819 0.12 +0.1 84,203 - GFF4819 0.12 -0.3 84,203 - GFF4819 0.12 -0.1 84,203 - GFF4819 0.12 -0.7 84,203 - GFF4819 0.12 +0.1 84,203 - GFF4819 0.12 -0.6 84,203 - GFF4819 0.12 -1.3 84,204 + GFF4819 0.12 -0.5 84,204 + GFF4819 0.12 +0.9 84,204 + GFF4819 0.12 -1.6 84,205 - GFF4819 0.12 -0.9 84,331 - GFF4819 0.21 -1.1 84,331 - GFF4819 0.21 -0.7 84,357 - GFF4819 0.23 +0.6 84,757 - GFF4819 0.52 -0.2 84,864 + GFF4819 0.60 -0.1 84,865 - GFF4819 0.60 +0.2 84,865 - GFF4819 0.60 -0.3
Or see this region's nucleotide sequence