Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4492 and GFF4493 are separated by 182 nucleotides GFF4493 and GFF4494 are separated by 3 nucleotides GFF4494 and GFF4495 are separated by 3 nucleotides
GFF4492 - Glutamyl-tRNA reductase, at 207,072 to 208,358
GFF4492
GFF4493 - Beta-barrel assembly-enhancing protease, at 208,541 to 210,265
GFF4493
GFF4494 - Outer-membrane lipoprotein LolB, at 210,269 to 210,886
GFF4494
GFF4495 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, at 210,890 to 211,741
GFF4495
Position (kb) 208
209
210
211 Strain fitness (log2 ratio) -2
-1
0
1 at 208.453 kb on + strand at 208.453 kb on + strand at 208.453 kb on + strand at 208.453 kb on + strand at 208.454 kb on - strand at 208.454 kb on - strand at 208.479 kb on + strand at 208.480 kb on - strand at 208.538 kb on + strand at 208.538 kb on + strand at 208.538 kb on + strand at 208.538 kb on + strand at 208.538 kb on + strand at 208.538 kb on + strand at 208.538 kb on + strand at 208.538 kb on + strand at 208.538 kb on + strand at 208.539 kb on - strand at 208.539 kb on - strand at 208.539 kb on - strand at 208.539 kb on - strand at 208.539 kb on - strand at 208.539 kb on - strand at 208.539 kb on - strand at 208.540 kb on + strand at 208.540 kb on + strand at 208.546 kb on + strand at 208.546 kb on + strand at 208.546 kb on + strand at 208.546 kb on + strand at 208.546 kb on + strand at 208.760 kb on + strand, within GFF4493 at 208.760 kb on + strand, within GFF4493 at 208.760 kb on + strand, within GFF4493 at 208.760 kb on + strand, within GFF4493 at 208.958 kb on + strand, within GFF4493 at 209.315 kb on + strand, within GFF4493 at 209.597 kb on + strand, within GFF4493 at 209.597 kb on + strand, within GFF4493 at 209.597 kb on + strand, within GFF4493 at 209.597 kb on + strand, within GFF4493 at 209.597 kb on + strand, within GFF4493 at 209.714 kb on + strand, within GFF4493 at 209.714 kb on + strand, within GFF4493 at 209.795 kb on + strand, within GFF4493 at 209.819 kb on + strand, within GFF4493 at 209.933 kb on + strand, within GFF4493 at 209.960 kb on + strand, within GFF4493 at 210.021 kb on + strand, within GFF4493 at 210.047 kb on + strand, within GFF4493 at 210.048 kb on - strand, within GFF4493 at 210.048 kb on - strand, within GFF4493 at 210.080 kb on + strand, within GFF4493 at 210.080 kb on + strand, within GFF4493 at 210.080 kb on + strand, within GFF4493 at 210.263 kb on + strand at 210.263 kb on + strand at 210.884 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 208,453 + +1.3 208,453 + -0.3 208,453 + +1.0 208,453 + +1.1 208,454 - -0.1 208,454 - -0.5 208,479 + -0.7 208,480 - -0.8 208,538 + -0.3 208,538 + -0.0 208,538 + +0.2 208,538 + +0.2 208,538 + +0.7 208,538 + -1.3 208,538 + -0.8 208,538 + +0.1 208,538 + +0.6 208,539 - -0.4 208,539 - +0.6 208,539 - +0.1 208,539 - -0.5 208,539 - -2.2 208,539 - -0.7 208,539 - -0.4 208,540 + +0.2 208,540 + -0.6 208,546 + -1.0 208,546 + -1.2 208,546 + -2.2 208,546 + -1.1 208,546 + -0.7 208,760 + GFF4493 0.13 -0.9 208,760 + GFF4493 0.13 +0.1 208,760 + GFF4493 0.13 -1.7 208,760 + GFF4493 0.13 -1.3 208,958 + GFF4493 0.24 -0.5 209,315 + GFF4493 0.45 -0.3 209,597 + GFF4493 0.61 -0.3 209,597 + GFF4493 0.61 -0.7 209,597 + GFF4493 0.61 -1.4 209,597 + GFF4493 0.61 -2.4 209,597 + GFF4493 0.61 -1.2 209,714 + GFF4493 0.68 +0.2 209,714 + GFF4493 0.68 -0.7 209,795 + GFF4493 0.73 +0.2 209,819 + GFF4493 0.74 -1.2 209,933 + GFF4493 0.81 -0.1 209,960 + GFF4493 0.82 -0.7 210,021 + GFF4493 0.86 -1.9 210,047 + GFF4493 0.87 -0.3 210,048 - GFF4493 0.87 -0.9 210,048 - GFF4493 0.87 -0.2 210,080 + GFF4493 0.89 +0.2 210,080 + GFF4493 0.89 +1.0 210,080 + GFF4493 0.89 -1.0 210,263 + -0.4 210,263 + -0.1 210,884 + +0.7
Or see this region's nucleotide sequence