Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4487 and GFF4488 are separated by 111 nucleotides GFF4488 and GFF4489 overlap by 8 nucleotides GFF4489 and GFF4490 overlap by 7 nucleotides GFF4490 and GFF4491 are separated by 0 nucleotides
GFF4487 - Lipid A deacylase PagL, at 202,999 to 203,517
GFF4487
GFF4488 - Glutamate racemase, at 203,629 to 204,420
GFF4488
GFF4489 - Molybdopterin-synthase adenylyltransferase, at 204,413 to 205,168
GFF4489
GFF4490 - Release factor glutamine methyltransferase, at 205,162 to 205,992
GFF4490
GFF4491 - Peptide chain release factor RF1, at 205,993 to 207,075
GFF4491
Position (kb) 204
205
206 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 203.422 kb on - strand, within GFF4487 at 203.507 kb on - strand at 203.507 kb on - strand at 203.507 kb on - strand at 203.555 kb on + strand at 203.555 kb on + strand at 203.556 kb on - strand at 203.573 kb on + strand at 203.574 kb on - strand at 203.574 kb on - strand at 203.614 kb on + strand at 203.615 kb on - strand at 204.654 kb on + strand, within GFF4489 at 204.655 kb on - strand, within GFF4489 at 204.655 kb on - strand, within GFF4489 at 204.655 kb on - strand, within GFF4489 at 204.655 kb on - strand, within GFF4489 at 205.030 kb on - strand, within GFF4489 at 205.030 kb on - strand, within GFF4489 at 205.030 kb on - strand, within GFF4489 at 205.995 kb on - strand at 205.995 kb on - strand at 205.995 kb on - strand at 205.995 kb on - strand at 205.995 kb on - strand at 206.003 kb on - strand at 206.028 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 203,422 - GFF4487 0.82 +1.0 203,507 - +2.2 203,507 - -0.1 203,507 - +0.3 203,555 + -0.1 203,555 + +0.2 203,556 - -0.7 203,573 + +0.8 203,574 - +0.0 203,574 - -0.3 203,614 + -1.2 203,615 - -0.7 204,654 + GFF4489 0.32 -0.6 204,655 - GFF4489 0.32 -2.2 204,655 - GFF4489 0.32 +0.7 204,655 - GFF4489 0.32 -1.2 204,655 - GFF4489 0.32 -2.5 205,030 - GFF4489 0.82 -1.9 205,030 - GFF4489 0.82 -3.9 205,030 - GFF4489 0.82 -2.8 205,995 - -1.3 205,995 - -0.1 205,995 - -0.7 205,995 - +0.3 205,995 - -0.5 206,003 - -0.5 206,028 - +0.9
Or see this region's nucleotide sequence