Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF409 and GFF410 overlap by 14 nucleotides GFF410 and GFF411 are separated by 141 nucleotides GFF411 and GFF412 are separated by 82 nucleotides GFF412 and GFF413 are separated by 65 nucleotides
GFF409 - hypothetical protein, at 451,957 to 452,529
GFF409
GFF410 - hypothetical protein, at 452,516 to 452,899
GFF410
GFF411 - Orotate phosphoribosyltransferase, at 453,041 to 453,685
GFF411
GFF412 - Exodeoxyribonuclease, at 453,768 to 454,547
GFF412
GFF413 - Sodium/glutamate symporter, at 454,613 to 455,821
GFF413
Position (kb) 453
454 Strain fitness (log2 ratio) -2
-1
0
1
2 at 452.092 kb on + strand, within GFF409 at 452.161 kb on + strand, within GFF409 at 452.161 kb on + strand, within GFF409 at 452.162 kb on - strand, within GFF409 at 452.177 kb on - strand, within GFF409 at 452.177 kb on - strand, within GFF409 at 452.726 kb on + strand, within GFF410 at 452.727 kb on - strand, within GFF410 at 452.731 kb on + strand, within GFF410 at 452.805 kb on + strand, within GFF410 at 452.805 kb on + strand, within GFF410 at 452.805 kb on + strand, within GFF410 at 452.805 kb on + strand, within GFF410 at 452.806 kb on - strand, within GFF410 at 452.807 kb on + strand, within GFF410 at 452.807 kb on + strand, within GFF410 at 452.807 kb on + strand, within GFF410 at 452.808 kb on - strand, within GFF410 at 452.808 kb on - strand, within GFF410 at 452.808 kb on - strand, within GFF410 at 452.808 kb on - strand, within GFF410 at 452.808 kb on - strand, within GFF410 at 452.808 kb on - strand, within GFF410 at 452.808 kb on - strand, within GFF410 at 452.979 kb on + strand at 452.979 kb on + strand at 452.980 kb on - strand at 452.980 kb on - strand at 453.308 kb on + strand, within GFF411 at 453.308 kb on + strand, within GFF411 at 453.309 kb on - strand, within GFF411 at 453.469 kb on + strand, within GFF411 at 453.469 kb on + strand, within GFF411 at 453.469 kb on + strand, within GFF411 at 453.470 kb on - strand, within GFF411 at 453.471 kb on + strand, within GFF411 at 453.471 kb on + strand, within GFF411 at 453.472 kb on - strand, within GFF411 at 453.675 kb on + strand at 453.676 kb on - strand at 453.702 kb on - strand at 453.712 kb on + strand at 453.716 kb on + strand at 453.717 kb on - strand at 453.717 kb on - strand at 453.720 kb on + strand at 453.720 kb on + strand at 453.720 kb on + strand at 453.721 kb on - strand at 453.721 kb on - strand at 453.735 kb on + strand at 453.740 kb on + strand at 453.740 kb on + strand at 453.740 kb on + strand at 453.740 kb on + strand at 453.741 kb on - strand at 453.767 kb on + strand at 453.797 kb on + strand at 454.201 kb on - strand, within GFF412 at 454.327 kb on - strand, within GFF412 at 454.327 kb on - strand, within GFF412 at 454.368 kb on + strand, within GFF412 at 454.545 kb on + strand at 454.545 kb on + strand at 454.545 kb on + strand at 454.545 kb on + strand at 454.545 kb on + strand at 454.545 kb on + strand at 454.545 kb on + strand at 454.546 kb on - strand at 454.546 kb on - strand at 454.546 kb on - strand at 454.546 kb on - strand at 454.546 kb on - strand at 454.546 kb on - strand at 454.546 kb on - strand at 454.546 kb on - strand at 454.546 kb on - strand at 454.546 kb on - strand at 454.546 kb on - strand at 454.598 kb on + strand at 454.615 kb on - strand at 454.644 kb on + strand at 454.645 kb on - strand at 454.645 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 452,092 + GFF409 0.24 +0.3 452,161 + GFF409 0.36 -0.1 452,161 + GFF409 0.36 +0.6 452,162 - GFF409 0.36 -0.3 452,177 - GFF409 0.38 +0.8 452,177 - GFF409 0.38 +0.5 452,726 + GFF410 0.55 +0.2 452,727 - GFF410 0.55 +1.2 452,731 + GFF410 0.56 +1.4 452,805 + GFF410 0.75 +0.1 452,805 + GFF410 0.75 -1.0 452,805 + GFF410 0.75 +0.2 452,805 + GFF410 0.75 -0.2 452,806 - GFF410 0.76 +0.5 452,807 + GFF410 0.76 +0.4 452,807 + GFF410 0.76 +0.1 452,807 + GFF410 0.76 +0.3 452,808 - GFF410 0.76 -1.2 452,808 - GFF410 0.76 -0.5 452,808 - GFF410 0.76 +0.5 452,808 - GFF410 0.76 +0.6 452,808 - GFF410 0.76 -0.4 452,808 - GFF410 0.76 -0.1 452,808 - GFF410 0.76 -0.1 452,979 + +1.1 452,979 + -0.1 452,980 - +0.8 452,980 - -0.2 453,308 + GFF411 0.41 -0.5 453,308 + GFF411 0.41 -0.2 453,309 - GFF411 0.42 -0.2 453,469 + GFF411 0.66 -0.5 453,469 + GFF411 0.66 -0.2 453,469 + GFF411 0.66 -0.8 453,470 - GFF411 0.67 -0.5 453,471 + GFF411 0.67 -1.5 453,471 + GFF411 0.67 -0.2 453,472 - GFF411 0.67 -1.5 453,675 + -2.0 453,676 - -2.0 453,702 - +0.1 453,712 + +1.0 453,716 + -0.5 453,717 - -0.4 453,717 - +0.2 453,720 + -1.8 453,720 + -1.2 453,720 + -0.8 453,721 - -1.5 453,721 - +1.2 453,735 + +0.8 453,740 + -0.0 453,740 + +0.8 453,740 + -0.8 453,740 + -0.2 453,741 - -0.2 453,767 + -1.9 453,797 + +1.8 454,201 - GFF412 0.56 -0.2 454,327 - GFF412 0.72 -0.2 454,327 - GFF412 0.72 -0.8 454,368 + GFF412 0.77 -0.2 454,545 + -0.3 454,545 + -0.8 454,545 + +0.5 454,545 + -1.6 454,545 + +0.7 454,545 + -0.6 454,545 + -0.2 454,546 - +0.6 454,546 - +0.8 454,546 - -0.3 454,546 - +0.5 454,546 - -0.2 454,546 - +0.6 454,546 - +1.5 454,546 - -1.4 454,546 - -0.5 454,546 - +0.0 454,546 - +0.0 454,598 + -0.3 454,615 - +0.6 454,644 + +0.3 454,645 - +1.4 454,645 - -0.2
Or see this region's nucleotide sequence