Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4050 and GFF4051 are separated by 2 nucleotides GFF4051 and GFF4052 are separated by 46 nucleotides GFF4052 and GFF4053 are separated by 148 nucleotides
GFF4050 - Acetolactate synthase isozyme 3 large subunit, at 314,961 to 316,685
GFF4050
GFF4051 - Acetolactate synthase isozyme 3 small subunit, at 316,688 to 317,179
GFF4051
GFF4052 - Ketol-acid reductoisomerase (NADP(+)), at 317,226 to 318,242
GFF4052
GFF4053 - hypothetical protein, at 318,391 to 319,248
GFF4053
Position (kb) 317
318
319 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 316.316 kb on + strand, within GFF4050 at 316.316 kb on + strand, within GFF4050 at 316.356 kb on + strand, within GFF4050 at 316.432 kb on - strand, within GFF4050 at 316.455 kb on + strand, within GFF4050 at 316.455 kb on + strand, within GFF4050 at 316.497 kb on + strand, within GFF4050 at 316.498 kb on - strand, within GFF4050 at 316.655 kb on + strand at 316.656 kb on - strand at 316.656 kb on - strand at 316.679 kb on + strand at 316.680 kb on - strand at 316.680 kb on - strand at 316.680 kb on - strand at 316.683 kb on + strand at 316.684 kb on - strand at 316.684 kb on - strand at 316.684 kb on - strand at 316.684 kb on - strand at 316.699 kb on + strand at 316.699 kb on + strand at 316.700 kb on - strand at 316.700 kb on - strand at 316.700 kb on - strand at 316.769 kb on + strand, within GFF4051 at 316.769 kb on + strand, within GFF4051 at 316.769 kb on + strand, within GFF4051 at 316.769 kb on + strand, within GFF4051 at 316.769 kb on + strand, within GFF4051 at 316.769 kb on + strand, within GFF4051 at 316.770 kb on - strand, within GFF4051 at 317.005 kb on + strand, within GFF4051 at 317.005 kb on + strand, within GFF4051 at 317.009 kb on + strand, within GFF4051 at 317.009 kb on + strand, within GFF4051 at 317.009 kb on + strand, within GFF4051 at 317.009 kb on + strand, within GFF4051 at 317.009 kb on + strand, within GFF4051 at 317.009 kb on + strand, within GFF4051 at 317.010 kb on - strand, within GFF4051 at 317.010 kb on - strand, within GFF4051 at 317.010 kb on - strand, within GFF4051 at 317.010 kb on - strand, within GFF4051 at 317.010 kb on - strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.046 kb on - strand, within GFF4051 at 317.046 kb on - strand, within GFF4051 at 317.046 kb on - strand, within GFF4051 at 317.046 kb on - strand, within GFF4051 at 317.046 kb on - strand, within GFF4051 at 317.047 kb on + strand, within GFF4051 at 317.047 kb on + strand, within GFF4051 at 317.048 kb on - strand, within GFF4051 at 317.048 kb on - strand, within GFF4051 at 317.048 kb on - strand, within GFF4051 at 317.166 kb on + strand at 317.167 kb on - strand at 317.187 kb on + strand at 317.187 kb on + strand at 317.187 kb on + strand at 317.188 kb on - strand at 317.211 kb on + strand at 317.211 kb on + strand at 317.212 kb on - strand at 317.212 kb on - strand at 317.213 kb on + strand at 317.213 kb on + strand at 317.213 kb on + strand at 317.214 kb on - strand at 317.214 kb on - strand at 317.214 kb on - strand at 317.214 kb on - strand at 317.238 kb on + strand at 317.239 kb on - strand at 317.290 kb on + strand at 317.290 kb on + strand at 317.290 kb on + strand at 317.290 kb on + strand at 317.290 kb on + strand at 317.290 kb on + strand at 317.290 kb on + strand at 317.290 kb on + strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.367 kb on - strand, within GFF4052 at 317.367 kb on - strand, within GFF4052 at 317.490 kb on + strand, within GFF4052 at 317.491 kb on - strand, within GFF4052 at 317.562 kb on + strand, within GFF4052 at 317.563 kb on - strand, within GFF4052 at 317.563 kb on - strand, within GFF4052 at 317.682 kb on + strand, within GFF4052 at 317.683 kb on - strand, within GFF4052 at 317.896 kb on - strand, within GFF4052 at 317.940 kb on + strand, within GFF4052 at 317.940 kb on + strand, within GFF4052 at 317.940 kb on + strand, within GFF4052 at 317.941 kb on - strand, within GFF4052 at 317.941 kb on - strand, within GFF4052 at 317.941 kb on - strand, within GFF4052 at 317.941 kb on - strand, within GFF4052 at 317.941 kb on - strand, within GFF4052 at 317.941 kb on - strand, within GFF4052 at 317.941 kb on - strand, within GFF4052 at 317.967 kb on + strand, within GFF4052 at 317.967 kb on + strand, within GFF4052 at 317.967 kb on + strand, within GFF4052 at 317.968 kb on - strand, within GFF4052 at 317.968 kb on - strand, within GFF4052 at 317.968 kb on - strand, within GFF4052 at 318.000 kb on + strand, within GFF4052 at 318.001 kb on - strand, within GFF4052 at 318.065 kb on + strand, within GFF4052 at 318.066 kb on - strand, within GFF4052 at 318.066 kb on - strand, within GFF4052 at 318.066 kb on - strand, within GFF4052 at 318.081 kb on + strand, within GFF4052 at 318.143 kb on + strand at 318.144 kb on - strand at 318.257 kb on + strand at 318.311 kb on + strand at 318.311 kb on + strand at 318.311 kb on + strand at 318.311 kb on + strand at 318.311 kb on + strand at 318.312 kb on - strand at 318.312 kb on - strand at 318.312 kb on - strand at 318.383 kb on + strand at 318.383 kb on + strand at 318.383 kb on + strand at 318.384 kb on - strand at 318.384 kb on - strand at 318.489 kb on + strand, within GFF4053 at 318.489 kb on + strand, within GFF4053 at 318.489 kb on + strand, within GFF4053 at 318.507 kb on + strand, within GFF4053 at 318.507 kb on + strand, within GFF4053 at 318.508 kb on - strand, within GFF4053 at 318.508 kb on - strand, within GFF4053 at 318.511 kb on + strand, within GFF4053 at 318.511 kb on + strand, within GFF4053 at 318.512 kb on - strand, within GFF4053 at 318.512 kb on - strand, within GFF4053 at 318.512 kb on - strand, within GFF4053 at 318.512 kb on - strand, within GFF4053 at 318.512 kb on - strand, within GFF4053 at 318.512 kb on - strand, within GFF4053 at 318.559 kb on + strand, within GFF4053 at 318.559 kb on + strand, within GFF4053 at 318.628 kb on + strand, within GFF4053 at 318.628 kb on + strand, within GFF4053 at 318.629 kb on - strand, within GFF4053 at 318.629 kb on - strand, within GFF4053 at 318.629 kb on - strand, within GFF4053 at 318.709 kb on - strand, within GFF4053 at 318.839 kb on + strand, within GFF4053 at 318.839 kb on + strand, within GFF4053 at 318.839 kb on + strand, within GFF4053 at 318.839 kb on + strand, within GFF4053 at 318.839 kb on + strand, within GFF4053 at 318.839 kb on + strand, within GFF4053 at 318.839 kb on + strand, within GFF4053 at 318.839 kb on + strand, within GFF4053 at 318.840 kb on - strand, within GFF4053 at 318.840 kb on - strand, within GFF4053 at 318.840 kb on - strand, within GFF4053 at 318.840 kb on - strand, within GFF4053 at 318.840 kb on - strand, within GFF4053 at 318.840 kb on - strand, within GFF4053 at 318.840 kb on - strand, within GFF4053 at 318.840 kb on - strand, within GFF4053 at 318.840 kb on - strand, within GFF4053 at 318.841 kb on + strand, within GFF4053 at 318.841 kb on + strand, within GFF4053 at 318.841 kb on + strand, within GFF4053 at 318.841 kb on + strand, within GFF4053 at 318.841 kb on + strand, within GFF4053 at 318.841 kb on + strand, within GFF4053 at 318.841 kb on + strand, within GFF4053 at 318.841 kb on + strand, within GFF4053 at 318.841 kb on + strand, within GFF4053 at 318.841 kb on + strand, within GFF4053 at 318.841 kb on + strand, within GFF4053 at 318.841 kb on + strand, within GFF4053 at 318.841 kb on + strand, within GFF4053 at 318.841 kb on + strand, within GFF4053 at 318.841 kb on + strand, within GFF4053 at 318.842 kb on - strand, within GFF4053 at 318.842 kb on - strand, within GFF4053 at 318.842 kb on - strand, within GFF4053 at 318.842 kb on - strand, within GFF4053 at 318.842 kb on - strand, within GFF4053 at 318.842 kb on - strand, within GFF4053 at 318.842 kb on - strand, within GFF4053 at 318.842 kb on - strand, within GFF4053 at 318.842 kb on - strand, within GFF4053 at 318.842 kb on - strand, within GFF4053 at 318.842 kb on - strand, within GFF4053 at 318.842 kb on - strand, within GFF4053 at 318.842 kb on - strand, within GFF4053 at 318.842 kb on - strand, within GFF4053 at 318.842 kb on - strand, within GFF4053 at 318.845 kb on + strand, within GFF4053 at 318.845 kb on + strand, within GFF4053 at 318.846 kb on - strand, within GFF4053 at 318.846 kb on - strand, within GFF4053 at 318.846 kb on - strand, within GFF4053 at 318.846 kb on - strand, within GFF4053 at 318.907 kb on + strand, within GFF4053 at 318.907 kb on + strand, within GFF4053 at 319.060 kb on + strand, within GFF4053 at 319.060 kb on + strand, within GFF4053 at 319.061 kb on - strand, within GFF4053 at 319.130 kb on + strand, within GFF4053 at 319.186 kb on + strand at 319.187 kb on - strand at 319.187 kb on - strand at 319.187 kb on - strand at 319.210 kb on + strand at 319.211 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 316,316 + GFF4050 0.79 -1.1 316,316 + GFF4050 0.79 -1.3 316,356 + GFF4050 0.81 -2.0 316,432 - GFF4050 0.85 -0.9 316,455 + GFF4050 0.87 -1.8 316,455 + GFF4050 0.87 -2.6 316,497 + GFF4050 0.89 -0.6 316,498 - GFF4050 0.89 -0.6 316,655 + -2.2 316,656 - -1.1 316,656 - -2.6 316,679 + -2.2 316,680 - -1.6 316,680 - -2.3 316,680 - -0.9 316,683 + -2.8 316,684 - -2.2 316,684 - -1.6 316,684 - -1.9 316,684 - -1.1 316,699 + -3.1 316,699 + -2.5 316,700 - -1.8 316,700 - -1.1 316,700 - -1.5 316,769 + GFF4051 0.16 -3.1 316,769 + GFF4051 0.16 -2.1 316,769 + GFF4051 0.16 -1.1 316,769 + GFF4051 0.16 -0.3 316,769 + GFF4051 0.16 -2.6 316,769 + GFF4051 0.16 +0.7 316,770 - GFF4051 0.17 -0.6 317,005 + GFF4051 0.64 +0.5 317,005 + GFF4051 0.64 -1.1 317,009 + GFF4051 0.65 -1.3 317,009 + GFF4051 0.65 -2.4 317,009 + GFF4051 0.65 +0.4 317,009 + GFF4051 0.65 -0.8 317,009 + GFF4051 0.65 -1.5 317,009 + GFF4051 0.65 +0.8 317,010 - GFF4051 0.65 -2.2 317,010 - GFF4051 0.65 -1.3 317,010 - GFF4051 0.65 -1.6 317,010 - GFF4051 0.65 -1.5 317,010 - GFF4051 0.65 +0.5 317,045 + GFF4051 0.73 -0.1 317,045 + GFF4051 0.73 -1.2 317,045 + GFF4051 0.73 -2.4 317,045 + GFF4051 0.73 -0.9 317,045 + GFF4051 0.73 -2.0 317,045 + GFF4051 0.73 -2.0 317,045 + GFF4051 0.73 -1.9 317,045 + GFF4051 0.73 -3.4 317,046 - GFF4051 0.73 -1.5 317,046 - GFF4051 0.73 -2.1 317,046 - GFF4051 0.73 -0.1 317,046 - GFF4051 0.73 -1.1 317,046 - GFF4051 0.73 -2.0 317,047 + GFF4051 0.73 -2.9 317,047 + GFF4051 0.73 -1.3 317,048 - GFF4051 0.73 -2.4 317,048 - GFF4051 0.73 -1.6 317,048 - GFF4051 0.73 -1.1 317,166 + +0.4 317,167 - -0.3 317,187 + +0.5 317,187 + +0.6 317,187 + -2.0 317,188 - -3.4 317,211 + +0.2 317,211 + -0.3 317,212 - -2.4 317,212 - -2.6 317,213 + +0.4 317,213 + +0.7 317,213 + +0.5 317,214 - -2.1 317,214 - -2.6 317,214 - -4.1 317,214 - -2.2 317,238 + -2.5 317,239 - -0.6 317,290 + -3.0 317,290 + -3.1 317,290 + -3.1 317,290 + -2.1 317,290 + -2.2 317,290 + -2.3 317,290 + -3.4 317,290 + -2.8 317,291 - -3.7 317,291 - -0.3 317,291 - -0.3 317,291 - -2.9 317,291 - -3.5 317,291 - -1.9 317,291 - -3.4 317,291 - -1.8 317,291 - -2.6 317,291 - -2.7 317,367 - GFF4052 0.14 -2.9 317,367 - GFF4052 0.14 -1.3 317,490 + GFF4052 0.26 -0.3 317,491 - GFF4052 0.26 -2.8 317,562 + GFF4052 0.33 -2.6 317,563 - GFF4052 0.33 -1.1 317,563 - GFF4052 0.33 -4.4 317,682 + GFF4052 0.45 -1.9 317,683 - GFF4052 0.45 -2.2 317,896 - GFF4052 0.66 -3.6 317,940 + GFF4052 0.70 -2.9 317,940 + GFF4052 0.70 -1.6 317,940 + GFF4052 0.70 -3.1 317,941 - GFF4052 0.70 -3.0 317,941 - GFF4052 0.70 -2.2 317,941 - GFF4052 0.70 -1.5 317,941 - GFF4052 0.70 -3.8 317,941 - GFF4052 0.70 -3.8 317,941 - GFF4052 0.70 -1.6 317,941 - GFF4052 0.70 -2.2 317,967 + GFF4052 0.73 -3.2 317,967 + GFF4052 0.73 -2.9 317,967 + GFF4052 0.73 -0.6 317,968 - GFF4052 0.73 -1.1 317,968 - GFF4052 0.73 -1.6 317,968 - GFF4052 0.73 -3.2 318,000 + GFF4052 0.76 -2.5 318,001 - GFF4052 0.76 -3.1 318,065 + GFF4052 0.82 -1.6 318,066 - GFF4052 0.83 -3.7 318,066 - GFF4052 0.83 -2.4 318,066 - GFF4052 0.83 -1.8 318,081 + GFF4052 0.84 -1.5 318,143 + -3.1 318,144 - -4.1 318,257 + -0.9 318,311 + +0.2 318,311 + -0.6 318,311 + +0.5 318,311 + +0.2 318,311 + -0.3 318,312 - +0.8 318,312 - +0.4 318,312 - -0.2 318,383 + +0.4 318,383 + +0.4 318,383 + +0.2 318,384 - +1.1 318,384 - -1.5 318,489 + GFF4053 0.11 +1.0 318,489 + GFF4053 0.11 +0.3 318,489 + GFF4053 0.11 +0.1 318,507 + GFF4053 0.14 -0.5 318,507 + GFF4053 0.14 +0.1 318,508 - GFF4053 0.14 -0.3 318,508 - GFF4053 0.14 +2.5 318,511 + GFF4053 0.14 -2.0 318,511 + GFF4053 0.14 +1.7 318,512 - GFF4053 0.14 +1.7 318,512 - GFF4053 0.14 +0.0 318,512 - GFF4053 0.14 +0.3 318,512 - GFF4053 0.14 -0.3 318,512 - GFF4053 0.14 +1.3 318,512 - GFF4053 0.14 +0.0 318,559 + GFF4053 0.20 +0.1 318,559 + GFF4053 0.20 +2.0 318,628 + GFF4053 0.28 -0.7 318,628 + GFF4053 0.28 +1.1 318,629 - GFF4053 0.28 +0.2 318,629 - GFF4053 0.28 +0.4 318,629 - GFF4053 0.28 +1.3 318,709 - GFF4053 0.37 -1.5 318,839 + GFF4053 0.52 +0.3 318,839 + GFF4053 0.52 +0.4 318,839 + GFF4053 0.52 +0.2 318,839 + GFF4053 0.52 +0.1 318,839 + GFF4053 0.52 +1.1 318,839 + GFF4053 0.52 -0.6 318,839 + GFF4053 0.52 -0.2 318,839 + GFF4053 0.52 -0.6 318,840 - GFF4053 0.52 +1.7 318,840 - GFF4053 0.52 -0.5 318,840 - GFF4053 0.52 +1.1 318,840 - GFF4053 0.52 +1.2 318,840 - GFF4053 0.52 +0.2 318,840 - GFF4053 0.52 +0.4 318,840 - GFF4053 0.52 +1.3 318,840 - GFF4053 0.52 -0.2 318,840 - GFF4053 0.52 +0.3 318,841 + GFF4053 0.52 +0.6 318,841 + GFF4053 0.52 +1.5 318,841 + GFF4053 0.52 +0.4 318,841 + GFF4053 0.52 -1.5 318,841 + GFF4053 0.52 +1.7 318,841 + GFF4053 0.52 +0.8 318,841 + GFF4053 0.52 -0.6 318,841 + GFF4053 0.52 -0.1 318,841 + GFF4053 0.52 +0.7 318,841 + GFF4053 0.52 +1.0 318,841 + GFF4053 0.52 +0.7 318,841 + GFF4053 0.52 +0.3 318,841 + GFF4053 0.52 +0.0 318,841 + GFF4053 0.52 +0.4 318,841 + GFF4053 0.52 +0.7 318,842 - GFF4053 0.53 +0.5 318,842 - GFF4053 0.53 -0.8 318,842 - GFF4053 0.53 -1.1 318,842 - GFF4053 0.53 +0.1 318,842 - GFF4053 0.53 +1.0 318,842 - GFF4053 0.53 +1.1 318,842 - GFF4053 0.53 +0.7 318,842 - GFF4053 0.53 +0.5 318,842 - GFF4053 0.53 -0.6 318,842 - GFF4053 0.53 +0.1 318,842 - GFF4053 0.53 -0.3 318,842 - GFF4053 0.53 -0.5 318,842 - GFF4053 0.53 +1.0 318,842 - GFF4053 0.53 -0.2 318,842 - GFF4053 0.53 +0.1 318,845 + GFF4053 0.53 -1.3 318,845 + GFF4053 0.53 +0.3 318,846 - GFF4053 0.53 +1.9 318,846 - GFF4053 0.53 +1.4 318,846 - GFF4053 0.53 +0.5 318,846 - GFF4053 0.53 -0.6 318,907 + GFF4053 0.60 +0.1 318,907 + GFF4053 0.60 -0.8 319,060 + GFF4053 0.78 -0.5 319,060 + GFF4053 0.78 -1.5 319,061 - GFF4053 0.78 +0.4 319,130 + GFF4053 0.86 +0.5 319,186 + +0.5 319,187 - -0.1 319,187 - -0.1 319,187 - +1.3 319,210 + +0.4 319,211 - -0.3
Or see this region's nucleotide sequence