Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4048 and GFF4049 are separated by 22 nucleotides GFF4049 and GFF4050 are separated by 399 nucleotides GFF4050 and GFF4051 are separated by 2 nucleotides GFF4051 and GFF4052 are separated by 46 nucleotides
GFF4048 - hypothetical protein, at 313,787 to 314,122
GFF4048
GFF4049 - hypothetical protein, at 314,145 to 314,561
GFF4049
GFF4050 - Acetolactate synthase isozyme 3 large subunit, at 314,961 to 316,685
GFF4050
GFF4051 - Acetolactate synthase isozyme 3 small subunit, at 316,688 to 317,179
GFF4051
GFF4052 - Ketol-acid reductoisomerase (NADP(+)), at 317,226 to 318,242
GFF4052
Position (kb) 314
315
316
317 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 314.125 kb on + strand at 314.125 kb on + strand at 314.125 kb on + strand at 314.126 kb on - strand at 314.147 kb on - strand at 314.204 kb on + strand, within GFF4049 at 314.204 kb on + strand, within GFF4049 at 314.424 kb on + strand, within GFF4049 at 314.424 kb on + strand, within GFF4049 at 314.424 kb on + strand, within GFF4049 at 314.425 kb on - strand, within GFF4049 at 314.439 kb on + strand, within GFF4049 at 314.497 kb on + strand, within GFF4049 at 314.497 kb on + strand, within GFF4049 at 314.596 kb on - strand at 314.651 kb on + strand at 314.709 kb on + strand at 314.709 kb on + strand at 314.773 kb on + strand at 314.774 kb on - strand at 314.837 kb on + strand at 314.837 kb on + strand at 314.838 kb on - strand at 314.838 kb on - strand at 314.860 kb on + strand at 314.861 kb on - strand at 314.861 kb on - strand at 314.898 kb on + strand at 314.899 kb on - strand at 314.899 kb on - strand at 314.899 kb on - strand at 314.899 kb on - strand at 314.899 kb on - strand at 314.904 kb on + strand at 314.904 kb on + strand at 314.904 kb on + strand at 314.905 kb on - strand at 314.905 kb on - strand at 314.905 kb on - strand at 314.905 kb on - strand at 314.905 kb on - strand at 314.905 kb on - strand at 314.905 kb on - strand at 314.907 kb on + strand at 314.907 kb on + strand at 314.907 kb on + strand at 314.935 kb on - strand at 314.972 kb on - strand at 314.972 kb on - strand at 315.021 kb on + strand at 315.021 kb on + strand at 315.021 kb on + strand at 315.021 kb on + strand at 315.021 kb on + strand at 315.021 kb on + strand at 315.021 kb on + strand at 315.022 kb on - strand at 315.022 kb on - strand at 315.022 kb on - strand at 315.022 kb on - strand at 315.022 kb on - strand at 315.022 kb on - strand at 315.022 kb on - strand at 315.022 kb on - strand at 315.023 kb on + strand at 315.023 kb on + strand at 315.023 kb on + strand at 315.023 kb on + strand at 315.023 kb on + strand at 315.024 kb on - strand at 315.024 kb on - strand at 315.024 kb on - strand at 315.027 kb on + strand at 315.027 kb on + strand at 315.027 kb on + strand at 315.027 kb on + strand at 315.027 kb on + strand at 315.060 kb on + strand at 315.060 kb on + strand at 315.060 kb on + strand at 315.129 kb on - strand at 315.172 kb on + strand, within GFF4050 at 315.172 kb on + strand, within GFF4050 at 315.173 kb on - strand, within GFF4050 at 315.173 kb on - strand, within GFF4050 at 315.215 kb on + strand, within GFF4050 at 315.228 kb on + strand, within GFF4050 at 315.228 kb on + strand, within GFF4050 at 315.228 kb on + strand, within GFF4050 at 315.228 kb on + strand, within GFF4050 at 315.228 kb on + strand, within GFF4050 at 315.229 kb on - strand, within GFF4050 at 315.230 kb on + strand, within GFF4050 at 315.230 kb on + strand, within GFF4050 at 315.399 kb on + strand, within GFF4050 at 315.399 kb on + strand, within GFF4050 at 315.399 kb on + strand, within GFF4050 at 315.399 kb on + strand, within GFF4050 at 315.400 kb on - strand, within GFF4050 at 315.400 kb on - strand, within GFF4050 at 315.595 kb on - strand, within GFF4050 at 315.595 kb on - strand, within GFF4050 at 315.595 kb on - strand, within GFF4050 at 315.750 kb on + strand, within GFF4050 at 315.750 kb on + strand, within GFF4050 at 315.751 kb on - strand, within GFF4050 at 315.751 kb on - strand, within GFF4050 at 315.751 kb on - strand, within GFF4050 at 315.751 kb on - strand, within GFF4050 at 315.751 kb on - strand, within GFF4050 at 315.752 kb on + strand, within GFF4050 at 316.179 kb on + strand, within GFF4050 at 316.179 kb on + strand, within GFF4050 at 316.180 kb on - strand, within GFF4050 at 316.182 kb on + strand, within GFF4050 at 316.182 kb on + strand, within GFF4050 at 316.182 kb on + strand, within GFF4050 at 316.182 kb on + strand, within GFF4050 at 316.183 kb on - strand, within GFF4050 at 316.183 kb on - strand, within GFF4050 at 316.183 kb on - strand, within GFF4050 at 316.183 kb on - strand, within GFF4050 at 316.316 kb on + strand, within GFF4050 at 316.316 kb on + strand, within GFF4050 at 316.356 kb on + strand, within GFF4050 at 316.432 kb on - strand, within GFF4050 at 316.455 kb on + strand, within GFF4050 at 316.455 kb on + strand, within GFF4050 at 316.497 kb on + strand, within GFF4050 at 316.498 kb on - strand, within GFF4050 at 316.655 kb on + strand at 316.656 kb on - strand at 316.656 kb on - strand at 316.679 kb on + strand at 316.680 kb on - strand at 316.680 kb on - strand at 316.680 kb on - strand at 316.683 kb on + strand at 316.684 kb on - strand at 316.684 kb on - strand at 316.684 kb on - strand at 316.684 kb on - strand at 316.699 kb on + strand at 316.699 kb on + strand at 316.700 kb on - strand at 316.700 kb on - strand at 316.700 kb on - strand at 316.769 kb on + strand, within GFF4051 at 316.769 kb on + strand, within GFF4051 at 316.769 kb on + strand, within GFF4051 at 316.769 kb on + strand, within GFF4051 at 316.769 kb on + strand, within GFF4051 at 316.769 kb on + strand, within GFF4051 at 316.770 kb on - strand, within GFF4051 at 317.005 kb on + strand, within GFF4051 at 317.005 kb on + strand, within GFF4051 at 317.009 kb on + strand, within GFF4051 at 317.009 kb on + strand, within GFF4051 at 317.009 kb on + strand, within GFF4051 at 317.009 kb on + strand, within GFF4051 at 317.009 kb on + strand, within GFF4051 at 317.009 kb on + strand, within GFF4051 at 317.010 kb on - strand, within GFF4051 at 317.010 kb on - strand, within GFF4051 at 317.010 kb on - strand, within GFF4051 at 317.010 kb on - strand, within GFF4051 at 317.010 kb on - strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.045 kb on + strand, within GFF4051 at 317.046 kb on - strand, within GFF4051 at 317.046 kb on - strand, within GFF4051 at 317.046 kb on - strand, within GFF4051 at 317.046 kb on - strand, within GFF4051 at 317.046 kb on - strand, within GFF4051 at 317.047 kb on + strand, within GFF4051 at 317.047 kb on + strand, within GFF4051 at 317.048 kb on - strand, within GFF4051 at 317.048 kb on - strand, within GFF4051 at 317.048 kb on - strand, within GFF4051 at 317.166 kb on + strand at 317.167 kb on - strand at 317.187 kb on + strand at 317.187 kb on + strand at 317.187 kb on + strand at 317.188 kb on - strand at 317.211 kb on + strand at 317.211 kb on + strand at 317.212 kb on - strand at 317.212 kb on - strand at 317.213 kb on + strand at 317.213 kb on + strand at 317.213 kb on + strand at 317.214 kb on - strand at 317.214 kb on - strand at 317.214 kb on - strand at 317.214 kb on - strand at 317.238 kb on + strand at 317.239 kb on - strand at 317.290 kb on + strand at 317.290 kb on + strand at 317.290 kb on + strand at 317.290 kb on + strand at 317.290 kb on + strand at 317.290 kb on + strand at 317.290 kb on + strand at 317.290 kb on + strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.291 kb on - strand at 317.367 kb on - strand, within GFF4052 at 317.367 kb on - strand, within GFF4052 at 317.490 kb on + strand, within GFF4052 at 317.491 kb on - strand, within GFF4052 at 317.562 kb on + strand, within GFF4052 at 317.563 kb on - strand, within GFF4052 at 317.563 kb on - strand, within GFF4052 at 317.682 kb on + strand, within GFF4052 at 317.683 kb on - strand, within GFF4052
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 314,125 + -0.5 314,125 + -0.4 314,125 + -0.6 314,126 - +1.3 314,147 - -0.8 314,204 + GFF4049 0.14 +0.5 314,204 + GFF4049 0.14 +0.1 314,424 + GFF4049 0.67 +0.2 314,424 + GFF4049 0.67 +0.0 314,424 + GFF4049 0.67 +0.6 314,425 - GFF4049 0.67 +0.1 314,439 + GFF4049 0.71 +1.3 314,497 + GFF4049 0.84 +0.4 314,497 + GFF4049 0.84 -0.3 314,596 - -0.8 314,651 + -0.7 314,709 + -0.6 314,709 + -1.0 314,773 + -0.9 314,774 - -0.3 314,837 + -0.3 314,837 + +1.6 314,838 - -3.1 314,838 - -3.8 314,860 + -1.0 314,861 - -1.5 314,861 - -2.6 314,898 + +0.8 314,899 - -3.8 314,899 - -1.3 314,899 - -2.1 314,899 - -0.3 314,899 - -2.3 314,904 + +0.1 314,904 + -0.3 314,904 + +0.9 314,905 - -1.6 314,905 - -2.9 314,905 - -2.0 314,905 - -2.0 314,905 - -1.8 314,905 - -3.4 314,905 - -1.6 314,907 + +0.5 314,907 + +0.3 314,907 + -0.5 314,935 - -0.6 314,972 - -0.9 314,972 - -1.6 315,021 + -1.5 315,021 + -2.0 315,021 + +0.4 315,021 + -1.3 315,021 + -0.3 315,021 + -1.1 315,021 + -1.1 315,022 - -1.6 315,022 - -1.1 315,022 - -2.2 315,022 - -0.6 315,022 - -0.9 315,022 - -2.5 315,022 - -1.5 315,022 - -1.5 315,023 + -1.5 315,023 + -1.6 315,023 + -1.1 315,023 + -0.9 315,023 + -1.1 315,024 - -0.9 315,024 - -1.1 315,024 - -0.9 315,027 + -1.6 315,027 + -1.3 315,027 + -0.3 315,027 + -0.9 315,027 + -0.6 315,060 + -0.3 315,060 + -1.1 315,060 + -1.8 315,129 - -0.3 315,172 + GFF4050 0.12 -1.8 315,172 + GFF4050 0.12 -0.3 315,173 - GFF4050 0.12 -2.3 315,173 - GFF4050 0.12 -1.9 315,215 + GFF4050 0.15 -1.6 315,228 + GFF4050 0.15 -0.6 315,228 + GFF4050 0.15 -0.6 315,228 + GFF4050 0.15 -0.3 315,228 + GFF4050 0.15 -2.4 315,228 + GFF4050 0.15 -1.3 315,229 - GFF4050 0.16 -0.6 315,230 + GFF4050 0.16 -0.9 315,230 + GFF4050 0.16 -0.3 315,399 + GFF4050 0.25 -1.1 315,399 + GFF4050 0.25 -1.3 315,399 + GFF4050 0.25 -0.6 315,399 + GFF4050 0.25 -2.4 315,400 - GFF4050 0.25 -1.8 315,400 - GFF4050 0.25 -1.3 315,595 - GFF4050 0.37 -2.0 315,595 - GFF4050 0.37 -1.3 315,595 - GFF4050 0.37 -2.6 315,750 + GFF4050 0.46 -1.1 315,750 + GFF4050 0.46 -1.8 315,751 - GFF4050 0.46 -0.6 315,751 - GFF4050 0.46 -1.3 315,751 - GFF4050 0.46 -0.3 315,751 - GFF4050 0.46 -1.5 315,751 - GFF4050 0.46 -1.5 315,752 + GFF4050 0.46 -0.9 316,179 + GFF4050 0.71 -0.6 316,179 + GFF4050 0.71 -0.6 316,180 - GFF4050 0.71 -1.3 316,182 + GFF4050 0.71 -1.1 316,182 + GFF4050 0.71 -0.3 316,182 + GFF4050 0.71 -1.2 316,182 + GFF4050 0.71 -2.9 316,183 - GFF4050 0.71 -1.3 316,183 - GFF4050 0.71 -0.9 316,183 - GFF4050 0.71 -1.8 316,183 - GFF4050 0.71 -1.3 316,316 + GFF4050 0.79 -1.1 316,316 + GFF4050 0.79 -1.3 316,356 + GFF4050 0.81 -2.0 316,432 - GFF4050 0.85 -0.9 316,455 + GFF4050 0.87 -1.8 316,455 + GFF4050 0.87 -2.6 316,497 + GFF4050 0.89 -0.6 316,498 - GFF4050 0.89 -0.6 316,655 + -2.2 316,656 - -1.1 316,656 - -2.6 316,679 + -2.2 316,680 - -1.6 316,680 - -2.3 316,680 - -0.9 316,683 + -2.8 316,684 - -2.2 316,684 - -1.6 316,684 - -1.9 316,684 - -1.1 316,699 + -3.1 316,699 + -2.5 316,700 - -1.8 316,700 - -1.1 316,700 - -1.5 316,769 + GFF4051 0.16 -3.1 316,769 + GFF4051 0.16 -2.1 316,769 + GFF4051 0.16 -1.1 316,769 + GFF4051 0.16 -0.3 316,769 + GFF4051 0.16 -2.6 316,769 + GFF4051 0.16 +0.7 316,770 - GFF4051 0.17 -0.6 317,005 + GFF4051 0.64 +0.5 317,005 + GFF4051 0.64 -1.1 317,009 + GFF4051 0.65 -1.3 317,009 + GFF4051 0.65 -2.4 317,009 + GFF4051 0.65 +0.4 317,009 + GFF4051 0.65 -0.8 317,009 + GFF4051 0.65 -1.5 317,009 + GFF4051 0.65 +0.8 317,010 - GFF4051 0.65 -2.2 317,010 - GFF4051 0.65 -1.3 317,010 - GFF4051 0.65 -1.6 317,010 - GFF4051 0.65 -1.5 317,010 - GFF4051 0.65 +0.5 317,045 + GFF4051 0.73 -0.1 317,045 + GFF4051 0.73 -1.2 317,045 + GFF4051 0.73 -2.4 317,045 + GFF4051 0.73 -0.9 317,045 + GFF4051 0.73 -2.0 317,045 + GFF4051 0.73 -2.0 317,045 + GFF4051 0.73 -1.9 317,045 + GFF4051 0.73 -3.4 317,046 - GFF4051 0.73 -1.5 317,046 - GFF4051 0.73 -2.1 317,046 - GFF4051 0.73 -0.1 317,046 - GFF4051 0.73 -1.1 317,046 - GFF4051 0.73 -2.0 317,047 + GFF4051 0.73 -2.9 317,047 + GFF4051 0.73 -1.3 317,048 - GFF4051 0.73 -2.4 317,048 - GFF4051 0.73 -1.6 317,048 - GFF4051 0.73 -1.1 317,166 + +0.4 317,167 - -0.3 317,187 + +0.5 317,187 + +0.6 317,187 + -2.0 317,188 - -3.4 317,211 + +0.2 317,211 + -0.3 317,212 - -2.4 317,212 - -2.6 317,213 + +0.4 317,213 + +0.7 317,213 + +0.5 317,214 - -2.1 317,214 - -2.6 317,214 - -4.1 317,214 - -2.2 317,238 + -2.5 317,239 - -0.6 317,290 + -3.0 317,290 + -3.1 317,290 + -3.1 317,290 + -2.1 317,290 + -2.2 317,290 + -2.3 317,290 + -3.4 317,290 + -2.8 317,291 - -3.7 317,291 - -0.3 317,291 - -0.3 317,291 - -2.9 317,291 - -3.5 317,291 - -1.9 317,291 - -3.4 317,291 - -1.8 317,291 - -2.6 317,291 - -2.7 317,367 - GFF4052 0.14 -2.9 317,367 - GFF4052 0.14 -1.3 317,490 + GFF4052 0.26 -0.3 317,491 - GFF4052 0.26 -2.8 317,562 + GFF4052 0.33 -2.6 317,563 - GFF4052 0.33 -1.1 317,563 - GFF4052 0.33 -4.4 317,682 + GFF4052 0.45 -1.9 317,683 - GFF4052 0.45 -2.2
Or see this region's nucleotide sequence