Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3747 and GFF3748 overlap by 11 nucleotides GFF3748 and GFF3749 are separated by 7 nucleotides
GFF3747 - Bifunctional ligase/repressor BirA, at 152 to 1,105
GFF3747
GFF3748 - Type III pantothenate kinase, at 1,095 to 1,847
GFF3748
GFF3749 - hypothetical protein, at 1,855 to 2,286
GFF3749
Position (kb) 0
1
2 Strain fitness (log2 ratio) -2
-1
0
1 at 0.095 kb on + strand at 0.096 kb on - strand at 0.118 kb on + strand at 0.119 kb on - strand at 0.119 kb on - strand at 0.119 kb on - strand at 0.119 kb on - strand at 0.121 kb on + strand at 0.121 kb on + strand at 0.121 kb on + strand at 0.145 kb on + strand at 0.145 kb on + strand at 0.171 kb on + strand at 0.240 kb on + strand at 0.240 kb on + strand at 0.240 kb on + strand at 0.240 kb on + strand at 0.252 kb on + strand, within GFF3747 at 0.253 kb on - strand, within GFF3747 at 0.351 kb on + strand, within GFF3747 at 1.852 kb on + strand at 1.852 kb on + strand at 1.852 kb on + strand at 1.852 kb on + strand at 1.852 kb on + strand at 1.852 kb on + strand at 1.852 kb on + strand at 1.852 kb on + strand at 1.852 kb on + strand at 1.852 kb on + strand at 1.852 kb on + strand at 1.852 kb on + strand at 1.852 kb on + strand at 1.852 kb on + strand at 1.852 kb on + strand at 1.852 kb on + strand at 1.853 kb on - strand at 1.853 kb on - strand at 1.853 kb on - strand at 1.853 kb on - strand at 1.853 kb on - strand at 1.853 kb on - strand at 1.853 kb on - strand at 1.854 kb on + strand at 1.854 kb on + strand at 1.854 kb on + strand at 1.854 kb on + strand at 1.854 kb on + strand at 1.854 kb on + strand at 1.854 kb on + strand at 1.854 kb on + strand at 1.855 kb on - strand at 1.855 kb on - strand at 1.855 kb on - strand at 1.855 kb on - strand at 1.855 kb on - strand at 1.877 kb on + strand at 1.878 kb on - strand at 1.900 kb on + strand, within GFF3749 at 1.900 kb on + strand, within GFF3749 at 1.900 kb on + strand, within GFF3749 at 1.900 kb on + strand, within GFF3749 at 1.900 kb on + strand, within GFF3749 at 1.900 kb on + strand, within GFF3749 at 1.901 kb on - strand, within GFF3749 at 1.901 kb on - strand, within GFF3749 at 1.901 kb on - strand, within GFF3749 at 1.901 kb on - strand, within GFF3749 at 1.943 kb on + strand, within GFF3749 at 1.944 kb on - strand, within GFF3749 at 1.944 kb on - strand, within GFF3749 at 1.944 kb on - strand, within GFF3749 at 1.954 kb on - strand, within GFF3749 at 1.961 kb on - strand, within GFF3749
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 95 + +0.5 96 - +1.1 118 + +0.9 119 - -1.9 119 - +0.4 119 - -0.9 119 - -0.2 121 + +0.1 121 + -0.9 121 + +1.6 145 + -0.2 145 + -0.5 171 + +0.3 240 + +0.7 240 + +1.4 240 + -1.3 240 + -0.5 252 + GFF3747 0.10 -1.7 253 - GFF3747 0.11 -1.3 351 + GFF3747 0.21 +1.0 1,852 + -0.2 1,852 + -0.3 1,852 + -0.1 1,852 + -1.4 1,852 + +0.7 1,852 + -0.5 1,852 + +1.0 1,852 + +0.9 1,852 + +0.0 1,852 + -0.2 1,852 + -0.2 1,852 + -0.3 1,852 + -0.1 1,852 + +0.2 1,852 + +0.2 1,852 + +0.3 1,853 - +1.0 1,853 - -0.2 1,853 - +0.0 1,853 - +0.6 1,853 - +0.6 1,853 - -0.5 1,853 - +1.0 1,854 + +1.7 1,854 + -0.2 1,854 + -0.3 1,854 + -0.7 1,854 + -1.6 1,854 + -1.0 1,854 + +0.6 1,854 + +1.5 1,855 - -0.2 1,855 - -1.5 1,855 - -0.9 1,855 - -0.5 1,855 - -1.6 1,877 + -0.2 1,878 - -1.8 1,900 + GFF3749 0.10 -0.0 1,900 + GFF3749 0.10 -0.0 1,900 + GFF3749 0.10 +0.3 1,900 + GFF3749 0.10 +0.5 1,900 + GFF3749 0.10 -0.2 1,900 + GFF3749 0.10 -0.1 1,901 - GFF3749 0.11 +0.1 1,901 - GFF3749 0.11 +0.1 1,901 - GFF3749 0.11 -1.0 1,901 - GFF3749 0.11 +0.2 1,943 + GFF3749 0.20 -0.0 1,944 - GFF3749 0.21 +0.0 1,944 - GFF3749 0.21 +0.2 1,944 - GFF3749 0.21 +0.4 1,954 - GFF3749 0.23 +0.2 1,961 - GFF3749 0.25 +0.7
Or see this region's nucleotide sequence