Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3020 and GFF3021 overlap by 13 nucleotides GFF3021 and GFF3022 overlap by 44 nucleotides GFF3022 and GFF3023 are separated by 455 nucleotides
GFF3020 - hypothetical protein, at 408,177 to 409,808
GFF3020
GFF3021 - hypothetical protein, at 409,796 to 409,987
GFF3021
GFF3022 - hypothetical protein, at 409,944 to 410,363
GFF3022
GFF3023 - hypothetical protein, at 410,819 to 410,992
GFF3023
Position (kb) 409
410 Strain fitness (log2 ratio) -2
-1
0
1 at 408.951 kb on + strand, within GFF3020 at 409.683 kb on + strand at 409.684 kb on - strand at 409.736 kb on + strand at 409.736 kb on + strand at 409.736 kb on + strand at 409.806 kb on + strand at 409.806 kb on + strand at 409.806 kb on + strand at 409.807 kb on - strand at 409.807 kb on - strand at 409.887 kb on + strand, within GFF3021 at 409.903 kb on + strand, within GFF3021 at 409.924 kb on + strand, within GFF3021 at 409.968 kb on + strand at 409.968 kb on + strand at 409.969 kb on - strand at 410.051 kb on + strand, within GFF3022 at 410.051 kb on + strand, within GFF3022 at 410.052 kb on - strand, within GFF3022 at 410.153 kb on + strand, within GFF3022 at 410.218 kb on + strand, within GFF3022 at 410.218 kb on + strand, within GFF3022 at 410.219 kb on - strand, within GFF3022 at 410.219 kb on - strand, within GFF3022 at 410.306 kb on + strand, within GFF3022 at 410.307 kb on - strand, within GFF3022 at 410.307 kb on - strand, within GFF3022 at 410.413 kb on - strand at 410.533 kb on - strand at 410.550 kb on - strand at 410.598 kb on + strand at 410.619 kb on - strand at 410.619 kb on - strand at 410.619 kb on - strand at 410.720 kb on + strand at 410.720 kb on + strand at 410.720 kb on + strand at 410.720 kb on + strand at 410.720 kb on + strand at 410.721 kb on - strand at 410.721 kb on - strand at 410.764 kb on + strand at 410.776 kb on + strand at 410.776 kb on + strand at 410.776 kb on + strand at 410.776 kb on + strand at 410.777 kb on - strand at 410.780 kb on - strand at 410.780 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 408,951 + GFF3020 0.47 -0.1 409,683 + -0.0 409,684 - -1.1 409,736 + +0.1 409,736 + -0.1 409,736 + +0.4 409,806 + -1.5 409,806 + -0.4 409,806 + -0.2 409,807 - -0.7 409,807 - +0.3 409,887 + GFF3021 0.47 -0.5 409,903 + GFF3021 0.56 -1.5 409,924 + GFF3021 0.67 -0.7 409,968 + +0.3 409,968 + +0.7 409,969 - +0.4 410,051 + GFF3022 0.25 -0.6 410,051 + GFF3022 0.25 -1.3 410,052 - GFF3022 0.26 +0.8 410,153 + GFF3022 0.50 -0.7 410,218 + GFF3022 0.65 -0.6 410,218 + GFF3022 0.65 -0.5 410,219 - GFF3022 0.65 +0.1 410,219 - GFF3022 0.65 +0.3 410,306 + GFF3022 0.86 +0.1 410,307 - GFF3022 0.86 -0.5 410,307 - GFF3022 0.86 -0.1 410,413 - -0.3 410,533 - +0.3 410,550 - -0.7 410,598 + +0.5 410,619 - -0.7 410,619 - +0.6 410,619 - +0.4 410,720 + -0.2 410,720 + -0.3 410,720 + -0.3 410,720 + +0.2 410,720 + +0.4 410,721 - -1.9 410,721 - -0.4 410,764 + +0.8 410,776 + +0.3 410,776 + +0.3 410,776 + -2.0 410,776 + -0.2 410,777 - -1.0 410,780 - -0.9 410,780 - -0.1
Or see this region's nucleotide sequence