Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2956 and GFF2957 are separated by 133 nucleotides GFF2957 and GFF2958 are separated by 0 nucleotides GFF2958 and GFF2959 are separated by 3 nucleotides
GFF2956 - Nitronate monooxygenase, at 329,952 to 331,016
GFF2956
GFF2957 - Molybdate-binding protein ModA, at 331,150 to 331,917
GFF2957
GFF2958 - Molybdenum transport system permease protein ModB, at 331,918 to 332,598
GFF2958
GFF2959 - Vitamin B12 import ATP-binding protein BtuD, at 332,602 to 333,681
GFF2959
Position (kb) 331
332
333 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 331.020 kb on + strand at 331.037 kb on + strand at 331.038 kb on - strand at 331.038 kb on - strand at 331.060 kb on + strand at 331.066 kb on + strand at 331.066 kb on + strand at 331.069 kb on - strand at 331.069 kb on - strand at 331.071 kb on - strand at 331.080 kb on + strand at 331.081 kb on - strand at 331.147 kb on + strand at 331.147 kb on + strand at 331.147 kb on + strand at 331.147 kb on + strand at 331.147 kb on + strand at 331.147 kb on + strand at 331.147 kb on + strand at 331.148 kb on - strand at 331.148 kb on - strand at 331.148 kb on - strand at 331.148 kb on - strand at 331.148 kb on - strand at 331.351 kb on + strand, within GFF2957 at 331.352 kb on - strand, within GFF2957 at 331.352 kb on - strand, within GFF2957 at 331.462 kb on + strand, within GFF2957 at 331.462 kb on + strand, within GFF2957 at 331.463 kb on - strand, within GFF2957 at 331.463 kb on - strand, within GFF2957 at 331.463 kb on - strand, within GFF2957 at 331.504 kb on + strand, within GFF2957 at 331.505 kb on - strand, within GFF2957 at 331.505 kb on - strand, within GFF2957 at 331.505 kb on - strand, within GFF2957 at 331.508 kb on + strand, within GFF2957 at 331.508 kb on + strand, within GFF2957 at 331.509 kb on - strand, within GFF2957 at 331.509 kb on - strand, within GFF2957 at 331.509 kb on - strand, within GFF2957 at 331.509 kb on - strand, within GFF2957 at 331.509 kb on - strand, within GFF2957 at 331.544 kb on - strand, within GFF2957 at 331.544 kb on - strand, within GFF2957 at 331.675 kb on + strand, within GFF2957 at 331.861 kb on + strand at 331.861 kb on + strand at 331.861 kb on + strand at 331.906 kb on + strand at 331.906 kb on + strand at 331.915 kb on + strand at 331.915 kb on + strand at 331.916 kb on - strand at 331.916 kb on - strand at 331.916 kb on - strand at 332.110 kb on + strand, within GFF2958 at 332.110 kb on + strand, within GFF2958 at 332.110 kb on + strand, within GFF2958 at 332.110 kb on + strand, within GFF2958 at 332.110 kb on + strand, within GFF2958 at 332.111 kb on - strand, within GFF2958 at 332.111 kb on - strand, within GFF2958 at 332.111 kb on - strand, within GFF2958 at 332.221 kb on + strand, within GFF2958 at 332.221 kb on + strand, within GFF2958 at 332.221 kb on + strand, within GFF2958 at 332.221 kb on + strand, within GFF2958 at 332.221 kb on + strand, within GFF2958 at 332.221 kb on + strand, within GFF2958 at 332.222 kb on - strand, within GFF2958 at 332.222 kb on - strand, within GFF2958 at 332.222 kb on - strand, within GFF2958 at 332.222 kb on - strand, within GFF2958 at 332.222 kb on - strand, within GFF2958 at 332.474 kb on - strand, within GFF2958 at 332.497 kb on + strand, within GFF2958 at 332.498 kb on - strand, within GFF2958 at 332.563 kb on + strand at 332.563 kb on + strand at 332.564 kb on - strand at 332.612 kb on + strand at 332.612 kb on + strand at 332.612 kb on + strand at 332.613 kb on - strand at 332.613 kb on - strand at 332.629 kb on + strand at 332.630 kb on - strand at 332.630 kb on - strand at 332.630 kb on - strand at 332.630 kb on - strand at 332.824 kb on - strand, within GFF2959 at 332.839 kb on + strand, within GFF2959 at 332.839 kb on + strand, within GFF2959 at 332.839 kb on + strand, within GFF2959 at 332.840 kb on - strand, within GFF2959 at 332.840 kb on - strand, within GFF2959 at 332.840 kb on - strand, within GFF2959 at 333.121 kb on + strand, within GFF2959 at 333.121 kb on + strand, within GFF2959 at 333.150 kb on + strand, within GFF2959 at 333.163 kb on + strand, within GFF2959 at 333.163 kb on + strand, within GFF2959 at 333.163 kb on + strand, within GFF2959 at 333.164 kb on - strand, within GFF2959 at 333.164 kb on - strand, within GFF2959 at 333.164 kb on - strand, within GFF2959 at 333.212 kb on + strand, within GFF2959 at 333.213 kb on - strand, within GFF2959 at 333.308 kb on + strand, within GFF2959 at 333.308 kb on + strand, within GFF2959 at 333.346 kb on + strand, within GFF2959
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 331,020 + -0.1 331,037 + -0.0 331,038 - -0.5 331,038 - -0.2 331,060 + -0.6 331,066 + -1.0 331,066 + +0.2 331,069 - +0.3 331,069 - -0.1 331,071 - -0.0 331,080 + +0.1 331,081 - -0.6 331,147 + +0.4 331,147 + -1.3 331,147 + -0.3 331,147 + -0.1 331,147 + +0.2 331,147 + -1.7 331,147 + -2.0 331,148 - -1.5 331,148 - -0.0 331,148 - -0.5 331,148 - -0.3 331,148 - -0.2 331,351 + GFF2957 0.26 -1.2 331,352 - GFF2957 0.26 -0.8 331,352 - GFF2957 0.26 -0.6 331,462 + GFF2957 0.41 -1.5 331,462 + GFF2957 0.41 -0.7 331,463 - GFF2957 0.41 -2.8 331,463 - GFF2957 0.41 -1.4 331,463 - GFF2957 0.41 -1.1 331,504 + GFF2957 0.46 -0.6 331,505 - GFF2957 0.46 -0.7 331,505 - GFF2957 0.46 -1.4 331,505 - GFF2957 0.46 -0.9 331,508 + GFF2957 0.47 -0.8 331,508 + GFF2957 0.47 +1.3 331,509 - GFF2957 0.47 -1.1 331,509 - GFF2957 0.47 -0.8 331,509 - GFF2957 0.47 -1.4 331,509 - GFF2957 0.47 -1.1 331,509 - GFF2957 0.47 -1.0 331,544 - GFF2957 0.51 +0.1 331,544 - GFF2957 0.51 -1.0 331,675 + GFF2957 0.68 -2.3 331,861 + +0.5 331,861 + -0.7 331,861 + +0.1 331,906 + +0.4 331,906 + -0.7 331,915 + -1.2 331,915 + +0.5 331,916 - -0.2 331,916 - -0.6 331,916 - -0.2 332,110 + GFF2958 0.28 -1.1 332,110 + GFF2958 0.28 +0.1 332,110 + GFF2958 0.28 -2.8 332,110 + GFF2958 0.28 -0.5 332,110 + GFF2958 0.28 -1.0 332,111 - GFF2958 0.28 +0.3 332,111 - GFF2958 0.28 -2.0 332,111 - GFF2958 0.28 -1.5 332,221 + GFF2958 0.44 -1.3 332,221 + GFF2958 0.44 -0.6 332,221 + GFF2958 0.44 +0.3 332,221 + GFF2958 0.44 -0.3 332,221 + GFF2958 0.44 -1.8 332,221 + GFF2958 0.44 +0.8 332,222 - GFF2958 0.45 -1.2 332,222 - GFF2958 0.45 -1.3 332,222 - GFF2958 0.45 -0.6 332,222 - GFF2958 0.45 -1.2 332,222 - GFF2958 0.45 -0.6 332,474 - GFF2958 0.82 -0.8 332,497 + GFF2958 0.85 +1.3 332,498 - GFF2958 0.85 -2.0 332,563 + -1.7 332,563 + -0.2 332,564 - -0.2 332,612 + +0.2 332,612 + -0.7 332,612 + -1.7 332,613 - -0.1 332,613 - +0.8 332,629 + -0.1 332,630 - -0.2 332,630 - +0.9 332,630 - -1.5 332,630 - -1.0 332,824 - GFF2959 0.21 -0.0 332,839 + GFF2959 0.22 -0.3 332,839 + GFF2959 0.22 -0.6 332,839 + GFF2959 0.22 -1.3 332,840 - GFF2959 0.22 -0.6 332,840 - GFF2959 0.22 +0.8 332,840 - GFF2959 0.22 -1.2 333,121 + GFF2959 0.48 -0.5 333,121 + GFF2959 0.48 +0.1 333,150 + GFF2959 0.51 -0.1 333,163 + GFF2959 0.52 +0.5 333,163 + GFF2959 0.52 +0.5 333,163 + GFF2959 0.52 -0.1 333,164 - GFF2959 0.52 +0.7 333,164 - GFF2959 0.52 +0.6 333,164 - GFF2959 0.52 -0.6 333,212 + GFF2959 0.56 +1.8 333,213 - GFF2959 0.57 -1.4 333,308 + GFF2959 0.65 +0.2 333,308 + GFF2959 0.65 +0.9 333,346 + GFF2959 0.69 -0.3
Or see this region's nucleotide sequence