Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2567 and GFF2568 are separated by 210 nucleotides GFF2568 and GFF2569 are separated by 91 nucleotides
GFF2567 - Sensor histidine kinase RcsC, at 355,633 to 359,103
GFF2567
GFF2568 - hypothetical protein, at 359,314 to 359,856
GFF2568
GFF2569 - hypothetical protein, at 359,948 to 361,147
GFF2569
Position (kb) 359
360 Strain fitness (log2 ratio) -2
-1
0
1
2 at 358.380 kb on + strand, within GFF2567 at 358.381 kb on - strand, within GFF2567 at 358.381 kb on - strand, within GFF2567 at 358.397 kb on + strand, within GFF2567 at 358.398 kb on - strand, within GFF2567 at 358.398 kb on - strand, within GFF2567 at 358.398 kb on - strand, within GFF2567 at 358.463 kb on + strand, within GFF2567 at 358.464 kb on - strand, within GFF2567 at 358.464 kb on - strand, within GFF2567 at 358.710 kb on + strand, within GFF2567 at 358.711 kb on - strand, within GFF2567 at 358.711 kb on - strand, within GFF2567 at 358.712 kb on + strand, within GFF2567 at 358.712 kb on + strand, within GFF2567 at 358.713 kb on - strand, within GFF2567 at 358.713 kb on - strand, within GFF2567 at 358.713 kb on - strand, within GFF2567 at 358.713 kb on - strand, within GFF2567 at 358.886 kb on + strand at 358.887 kb on - strand at 358.959 kb on - strand at 358.979 kb on + strand at 358.979 kb on + strand at 358.979 kb on + strand at 358.980 kb on - strand at 358.980 kb on - strand at 359.031 kb on - strand at 359.060 kb on + strand at 359.060 kb on + strand at 359.060 kb on + strand at 359.060 kb on + strand at 359.060 kb on + strand at 359.061 kb on - strand at 359.061 kb on - strand at 359.061 kb on - strand at 359.173 kb on + strand at 359.504 kb on + strand, within GFF2568 at 359.515 kb on - strand, within GFF2568 at 359.576 kb on + strand, within GFF2568 at 359.577 kb on - strand, within GFF2568 at 359.700 kb on - strand, within GFF2568 at 359.836 kb on + strand at 359.837 kb on - strand at 359.847 kb on + strand at 359.847 kb on + strand at 359.847 kb on + strand at 359.847 kb on + strand at 359.848 kb on - strand at 359.848 kb on - strand at 359.848 kb on - strand at 359.848 kb on - strand at 359.850 kb on + strand at 359.851 kb on - strand at 359.851 kb on - strand at 359.851 kb on - strand at 359.966 kb on - strand at 359.966 kb on - strand at 359.966 kb on - strand at 360.012 kb on + strand at 360.012 kb on + strand at 360.012 kb on + strand at 360.053 kb on + strand at 360.053 kb on + strand at 360.053 kb on + strand at 360.054 kb on - strand at 360.054 kb on - strand at 360.054 kb on - strand at 360.054 kb on - strand at 360.062 kb on + strand at 360.062 kb on + strand at 360.063 kb on - strand at 360.063 kb on - strand at 360.097 kb on + strand, within GFF2569 at 360.097 kb on + strand, within GFF2569 at 360.098 kb on - strand, within GFF2569 at 360.115 kb on - strand, within GFF2569 at 360.116 kb on + strand, within GFF2569 at 360.116 kb on + strand, within GFF2569 at 360.116 kb on + strand, within GFF2569 at 360.117 kb on - strand, within GFF2569 at 360.117 kb on - strand, within GFF2569 at 360.232 kb on + strand, within GFF2569 at 360.232 kb on + strand, within GFF2569 at 360.232 kb on + strand, within GFF2569 at 360.233 kb on - strand, within GFF2569 at 360.233 kb on - strand, within GFF2569 at 360.233 kb on - strand, within GFF2569 at 360.233 kb on - strand, within GFF2569 at 360.236 kb on + strand, within GFF2569 at 360.438 kb on + strand, within GFF2569 at 360.449 kb on + strand, within GFF2569 at 360.450 kb on - strand, within GFF2569 at 360.450 kb on - strand, within GFF2569 at 360.457 kb on - strand, within GFF2569 at 360.488 kb on + strand, within GFF2569 at 360.488 kb on + strand, within GFF2569 at 360.488 kb on + strand, within GFF2569 at 360.488 kb on + strand, within GFF2569 at 360.488 kb on + strand, within GFF2569 at 360.488 kb on + strand, within GFF2569 at 360.489 kb on - strand, within GFF2569 at 360.489 kb on - strand, within GFF2569 at 360.489 kb on - strand, within GFF2569 at 360.515 kb on - strand, within GFF2569 at 360.515 kb on - strand, within GFF2569 at 360.635 kb on + strand, within GFF2569 at 360.636 kb on - strand, within GFF2569 at 360.636 kb on - strand, within GFF2569 at 360.679 kb on + strand, within GFF2569 at 360.679 kb on + strand, within GFF2569 at 360.679 kb on + strand, within GFF2569 at 360.679 kb on + strand, within GFF2569 at 360.811 kb on - strand, within GFF2569 at 360.811 kb on - strand, within GFF2569 at 360.811 kb on - strand, within GFF2569
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 358,380 + GFF2567 0.79 +0.9 358,381 - GFF2567 0.79 -0.2 358,381 - GFF2567 0.79 +0.7 358,397 + GFF2567 0.80 -0.4 358,398 - GFF2567 0.80 -1.9 358,398 - GFF2567 0.80 -0.1 358,398 - GFF2567 0.80 +0.2 358,463 + GFF2567 0.82 -0.5 358,464 - GFF2567 0.82 -0.6 358,464 - GFF2567 0.82 +0.1 358,710 + GFF2567 0.89 +0.7 358,711 - GFF2567 0.89 -0.8 358,711 - GFF2567 0.89 -0.5 358,712 + GFF2567 0.89 -0.1 358,712 + GFF2567 0.89 +1.5 358,713 - GFF2567 0.89 -1.5 358,713 - GFF2567 0.89 +0.2 358,713 - GFF2567 0.89 -0.4 358,713 - GFF2567 0.89 -0.3 358,886 + -0.5 358,887 - +0.4 358,959 - +0.1 358,979 + -1.1 358,979 + +0.1 358,979 + -0.9 358,980 - +0.3 358,980 - -0.5 359,031 - -0.9 359,060 + -0.5 359,060 + -0.7 359,060 + -0.5 359,060 + -0.2 359,060 + -0.8 359,061 - +0.1 359,061 - +0.1 359,061 - +0.2 359,173 + -0.4 359,504 + GFF2568 0.35 -0.7 359,515 - GFF2568 0.37 -0.5 359,576 + GFF2568 0.48 -1.3 359,577 - GFF2568 0.48 -1.1 359,700 - GFF2568 0.71 -1.8 359,836 + -0.7 359,837 - +0.4 359,847 + -0.5 359,847 + +0.4 359,847 + -0.1 359,847 + -0.5 359,848 - +0.9 359,848 - +1.8 359,848 - +0.2 359,848 - -0.5 359,850 + -0.7 359,851 - +0.3 359,851 - -0.3 359,851 - -0.9 359,966 - +1.7 359,966 - +0.5 359,966 - +0.6 360,012 + +0.9 360,012 + -0.3 360,012 + -0.1 360,053 + +0.0 360,053 + -1.0 360,053 + -1.7 360,054 - +1.2 360,054 - -0.1 360,054 - +0.1 360,054 - +0.1 360,062 + +0.3 360,062 + -0.5 360,063 - +1.1 360,063 - -0.8 360,097 + GFF2569 0.12 +0.7 360,097 + GFF2569 0.12 +0.4 360,098 - GFF2569 0.12 -0.7 360,115 - GFF2569 0.14 -0.6 360,116 + GFF2569 0.14 +0.8 360,116 + GFF2569 0.14 -1.8 360,116 + GFF2569 0.14 +0.4 360,117 - GFF2569 0.14 -0.2 360,117 - GFF2569 0.14 +0.8 360,232 + GFF2569 0.24 +0.5 360,232 + GFF2569 0.24 -0.2 360,232 + GFF2569 0.24 -0.5 360,233 - GFF2569 0.24 +1.1 360,233 - GFF2569 0.24 -0.8 360,233 - GFF2569 0.24 +1.7 360,233 - GFF2569 0.24 -0.1 360,236 + GFF2569 0.24 -0.0 360,438 + GFF2569 0.41 +0.9 360,449 + GFF2569 0.42 -0.4 360,450 - GFF2569 0.42 +0.5 360,450 - GFF2569 0.42 -0.2 360,457 - GFF2569 0.42 +0.3 360,488 + GFF2569 0.45 -0.8 360,488 + GFF2569 0.45 -0.3 360,488 + GFF2569 0.45 -1.2 360,488 + GFF2569 0.45 +0.6 360,488 + GFF2569 0.45 +0.2 360,488 + GFF2569 0.45 -0.3 360,489 - GFF2569 0.45 +0.1 360,489 - GFF2569 0.45 -0.1 360,489 - GFF2569 0.45 -0.1 360,515 - GFF2569 0.47 -0.7 360,515 - GFF2569 0.47 +0.3 360,635 + GFF2569 0.57 -0.3 360,636 - GFF2569 0.57 -0.2 360,636 - GFF2569 0.57 +0.2 360,679 + GFF2569 0.61 +0.2 360,679 + GFF2569 0.61 -1.7 360,679 + GFF2569 0.61 -0.1 360,679 + GFF2569 0.61 +0.5 360,811 - GFF2569 0.72 +0.7 360,811 - GFF2569 0.72 -0.2 360,811 - GFF2569 0.72 +1.5
Or see this region's nucleotide sequence