Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2561 and GFF2562 are separated by 146 nucleotides GFF2562 and GFF2563 are separated by 271 nucleotides GFF2563 and GFF2564 are separated by 911 nucleotides
GFF2561 - Putative outer membrane protein, at 350,008 to 351,279
GFF2561
GFF2562 - hypothetical protein, at 351,426 to 351,908
GFF2562
GFF2563 - hypothetical protein, at 352,180 to 352,404
GFF2563
GFF2564 - hypothetical protein, at 353,316 to 353,639
GFF2564
Position (kb) 352
353 Strain fitness (log2 ratio) -2
-1
0
1 at 351.250 kb on - strand at 351.280 kb on + strand at 351.280 kb on + strand at 351.281 kb on - strand at 351.281 kb on - strand at 351.281 kb on - strand at 351.283 kb on + strand at 351.284 kb on - strand at 351.284 kb on - strand at 351.284 kb on - strand at 351.284 kb on - strand at 351.284 kb on - strand at 351.284 kb on - strand at 351.315 kb on - strand at 351.339 kb on + strand at 351.339 kb on + strand at 351.339 kb on + strand at 351.339 kb on + strand at 351.339 kb on + strand at 351.340 kb on - strand at 351.346 kb on + strand at 351.346 kb on + strand at 351.346 kb on + strand at 351.346 kb on + strand at 351.347 kb on - strand at 351.347 kb on - strand at 351.347 kb on - strand at 351.347 kb on - strand at 351.347 kb on - strand at 351.423 kb on + strand at 351.472 kb on + strand at 351.472 kb on + strand at 351.472 kb on + strand at 351.472 kb on + strand at 351.472 kb on + strand at 351.472 kb on + strand at 351.472 kb on + strand at 351.472 kb on + strand at 351.472 kb on + strand at 351.472 kb on + strand at 351.473 kb on - strand at 351.473 kb on - strand at 351.473 kb on - strand at 351.522 kb on - strand, within GFF2562 at 351.522 kb on - strand, within GFF2562 at 351.576 kb on + strand, within GFF2562 at 351.576 kb on + strand, within GFF2562 at 351.577 kb on - strand, within GFF2562 at 351.577 kb on - strand, within GFF2562 at 351.706 kb on + strand, within GFF2562 at 351.706 kb on + strand, within GFF2562 at 351.706 kb on + strand, within GFF2562 at 351.706 kb on + strand, within GFF2562 at 351.706 kb on + strand, within GFF2562 at 351.877 kb on + strand at 351.877 kb on + strand at 351.877 kb on + strand at 351.902 kb on + strand at 351.909 kb on - strand at 352.079 kb on - strand at 352.094 kb on + strand at 352.095 kb on - strand at 352.095 kb on - strand at 352.095 kb on - strand at 352.119 kb on + strand at 352.129 kb on + strand at 352.241 kb on + strand, within GFF2563 at 352.242 kb on - strand, within GFF2563 at 352.242 kb on - strand, within GFF2563 at 352.242 kb on - strand, within GFF2563 at 352.242 kb on - strand, within GFF2563 at 352.398 kb on + strand at 352.399 kb on - strand at 352.404 kb on + strand at 352.404 kb on + strand at 352.404 kb on + strand at 352.404 kb on + strand at 352.404 kb on + strand at 352.404 kb on + strand at 352.404 kb on + strand at 352.404 kb on + strand at 352.404 kb on + strand at 352.404 kb on + strand at 352.404 kb on + strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.405 kb on - strand at 352.408 kb on + strand at 352.408 kb on + strand at 352.408 kb on + strand at 352.408 kb on + strand at 352.409 kb on - strand at 352.409 kb on - strand at 352.409 kb on - strand at 352.409 kb on - strand at 352.409 kb on - strand at 352.409 kb on - strand at 352.409 kb on - strand at 352.409 kb on - strand at 352.409 kb on - strand at 352.409 kb on - strand at 352.409 kb on - strand at 352.409 kb on - strand at 352.411 kb on + strand at 352.411 kb on + strand at 352.411 kb on + strand at 352.411 kb on + strand at 352.412 kb on - strand at 352.412 kb on - strand at 352.421 kb on + strand at 352.422 kb on - strand at 352.454 kb on - strand at 352.467 kb on - strand at 352.533 kb on + strand at 352.534 kb on - strand at 352.534 kb on - strand at 352.559 kb on + strand at 352.559 kb on + strand at 352.560 kb on - strand at 352.560 kb on - strand at 352.560 kb on - strand at 352.560 kb on - strand at 352.563 kb on + strand at 352.563 kb on + strand at 352.563 kb on + strand at 352.563 kb on + strand at 352.564 kb on - strand at 352.564 kb on - strand at 352.564 kb on - strand at 352.564 kb on - strand at 352.564 kb on - strand at 352.564 kb on - strand at 352.564 kb on - strand at 352.567 kb on + strand at 352.567 kb on + strand at 352.567 kb on + strand at 352.567 kb on + strand at 352.567 kb on + strand at 352.567 kb on + strand at 352.568 kb on - strand at 352.568 kb on - strand at 352.568 kb on - strand at 352.652 kb on + strand at 352.652 kb on + strand at 352.652 kb on + strand at 352.652 kb on + strand at 352.652 kb on + strand at 352.652 kb on + strand at 352.653 kb on - strand at 352.653 kb on - strand at 352.653 kb on - strand at 352.653 kb on - strand at 352.653 kb on - strand at 352.653 kb on - strand at 352.653 kb on - strand at 352.709 kb on + strand at 352.813 kb on + strand at 352.813 kb on + strand at 352.814 kb on - strand at 352.817 kb on - strand at 352.828 kb on + strand at 352.979 kb on + strand at 352.980 kb on + strand at 352.980 kb on + strand at 352.981 kb on - strand at 352.981 kb on - strand at 352.981 kb on - strand at 352.981 kb on - strand at 352.981 kb on - strand at 352.981 kb on - strand at 352.983 kb on - strand at 352.983 kb on - strand at 352.983 kb on - strand at 352.997 kb on + strand at 353.010 kb on + strand at 353.010 kb on + strand at 353.010 kb on + strand at 353.010 kb on + strand at 353.010 kb on + strand at 353.010 kb on + strand at 353.011 kb on - strand at 353.011 kb on - strand at 353.011 kb on - strand at 353.078 kb on + strand at 353.149 kb on + strand at 353.149 kb on + strand at 353.168 kb on + strand at 353.169 kb on - strand at 353.189 kb on + strand at 353.228 kb on - strand at 353.258 kb on + strand at 353.258 kb on + strand at 353.265 kb on - strand at 353.316 kb on - strand at 353.316 kb on - strand at 353.316 kb on - strand at 353.316 kb on - strand at 353.332 kb on + strand at 353.332 kb on + strand at 353.333 kb on - strand at 353.345 kb on + strand at 353.345 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 351,250 - -0.1 351,280 + +1.1 351,280 + -1.3 351,281 - -0.4 351,281 - +0.3 351,281 - +0.2 351,283 + -2.2 351,284 - -0.3 351,284 - +0.4 351,284 - +0.1 351,284 - +0.6 351,284 - +1.2 351,284 - +0.1 351,315 - -0.2 351,339 + +0.1 351,339 + +0.4 351,339 + +0.5 351,339 + +0.5 351,339 + -0.1 351,340 - +0.1 351,346 + -2.1 351,346 + +0.1 351,346 + +0.3 351,346 + +0.9 351,347 - -1.4 351,347 - +0.5 351,347 - +0.5 351,347 - -0.1 351,347 - -0.4 351,423 + -0.8 351,472 + +0.8 351,472 + -0.8 351,472 + +1.1 351,472 + -0.4 351,472 + -0.6 351,472 + -1.1 351,472 + -0.9 351,472 + +0.6 351,472 + -1.1 351,472 + +0.7 351,473 - +0.8 351,473 - -0.2 351,473 - +0.1 351,522 - GFF2562 0.20 -0.1 351,522 - GFF2562 0.20 +0.2 351,576 + GFF2562 0.31 -0.2 351,576 + GFF2562 0.31 -1.5 351,577 - GFF2562 0.31 -0.5 351,577 - GFF2562 0.31 +0.2 351,706 + GFF2562 0.58 -0.4 351,706 + GFF2562 0.58 -1.0 351,706 + GFF2562 0.58 -0.6 351,706 + GFF2562 0.58 +1.0 351,706 + GFF2562 0.58 -0.8 351,877 + +0.3 351,877 + -1.3 351,877 + -0.9 351,902 + -0.5 351,909 - +1.3 352,079 - -1.3 352,094 + -0.4 352,095 - +0.2 352,095 - +0.2 352,095 - +0.1 352,119 + -0.4 352,129 + -0.5 352,241 + GFF2563 0.27 -1.5 352,242 - GFF2563 0.28 -1.3 352,242 - GFF2563 0.28 -1.1 352,242 - GFF2563 0.28 -1.0 352,242 - GFF2563 0.28 -0.0 352,398 + -0.4 352,399 - -1.1 352,404 + +1.5 352,404 + -0.1 352,404 + +0.2 352,404 + -0.1 352,404 + -0.8 352,404 + +1.5 352,404 + +0.7 352,404 + +0.2 352,404 + +0.4 352,404 + -0.7 352,404 + -0.6 352,405 - +0.9 352,405 - -0.9 352,405 - +0.2 352,405 - -0.2 352,405 - -0.2 352,405 - -0.4 352,405 - -0.8 352,405 - +0.1 352,405 - +0.4 352,405 - +0.2 352,405 - -0.5 352,405 - +0.5 352,405 - -1.5 352,405 - +0.1 352,405 - -0.6 352,405 - +0.5 352,405 - -0.1 352,405 - +0.6 352,405 - +0.2 352,408 + +0.5 352,408 + -0.4 352,408 + -0.2 352,408 + -0.1 352,409 - -0.1 352,409 - -1.5 352,409 - -0.8 352,409 - -0.7 352,409 - +0.3 352,409 - +0.9 352,409 - +0.9 352,409 - -0.0 352,409 - +0.5 352,409 - +0.2 352,409 - +1.3 352,409 - -0.9 352,411 + +0.6 352,411 + +0.2 352,411 + +0.5 352,411 + -0.8 352,412 - -0.1 352,412 - -1.3 352,421 + -0.3 352,422 - +0.5 352,454 - -0.3 352,467 - -0.3 352,533 + +1.1 352,534 - -1.0 352,534 - -1.2 352,559 + -0.6 352,559 + -1.1 352,560 - -0.3 352,560 - -0.4 352,560 - -0.4 352,560 - -0.1 352,563 + +0.2 352,563 + -0.2 352,563 + +1.4 352,563 + -0.4 352,564 - +0.4 352,564 - -0.5 352,564 - +0.7 352,564 - +0.0 352,564 - -1.0 352,564 - -0.1 352,564 - +0.1 352,567 + -0.3 352,567 + -0.1 352,567 + +0.3 352,567 + -0.5 352,567 + +0.2 352,567 + +0.1 352,568 - +0.8 352,568 - +0.1 352,568 - -0.1 352,652 + -0.6 352,652 + +0.5 352,652 + -1.1 352,652 + -0.1 352,652 + -0.9 352,652 + -0.3 352,653 - -1.0 352,653 - -0.3 352,653 - +1.1 352,653 - +0.9 352,653 - -0.7 352,653 - -0.8 352,653 - -0.4 352,709 + -0.6 352,813 + -0.5 352,813 + -1.6 352,814 - -1.2 352,817 - -0.3 352,828 + +0.1 352,979 + +1.3 352,980 + -1.2 352,980 + -0.8 352,981 - +0.3 352,981 - -0.1 352,981 - -0.1 352,981 - +0.1 352,981 - +0.0 352,981 - +0.0 352,983 - -2.5 352,983 - -0.8 352,983 - -0.1 352,997 + +0.1 353,010 + -0.6 353,010 + -1.4 353,010 + -0.1 353,010 + +1.5 353,010 + +0.4 353,010 + -0.2 353,011 - -1.4 353,011 - -1.6 353,011 - -0.7 353,078 + +1.1 353,149 + -0.2 353,149 + +0.3 353,168 + +0.8 353,169 - -0.5 353,189 + +0.1 353,228 - -0.6 353,258 + -0.1 353,258 + +1.2 353,265 - +0.1 353,316 - +0.3 353,316 - +0.2 353,316 - -0.3 353,316 - +0.2 353,332 + -0.7 353,332 + -0.8 353,333 - +0.1 353,345 + -0.4 353,345 + -0.9
Or see this region's nucleotide sequence