Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2044 and GFF2045 are separated by 89 nucleotides GFF2045 and GFF2046 overlap by 4 nucleotides
GFF2044 - tRNA threonylcarbamoyladenosine dehydratase, at 288,402 to 289,220
GFF2044
GFF2045 - Sulfur acceptor protein CsdE, at 289,310 to 289,714
GFF2045
GFF2046 - Cysteine desulfurase SufS, at 289,711 to 290,916
GFF2046
Position (kb) 289
290 Strain fitness (log2 ratio) -1
0
1
2 at 288.325 kb on + strand at 288.326 kb on - strand at 288.326 kb on - strand at 288.333 kb on + strand at 288.333 kb on + strand at 288.333 kb on + strand at 288.376 kb on + strand at 288.377 kb on - strand at 288.377 kb on - strand at 288.377 kb on - strand at 288.377 kb on - strand at 288.378 kb on + strand at 288.379 kb on - strand at 288.379 kb on - strand at 288.379 kb on - strand at 288.413 kb on + strand at 288.414 kb on - strand at 288.451 kb on - strand at 288.451 kb on - strand at 288.451 kb on - strand at 288.562 kb on + strand, within GFF2044 at 288.562 kb on + strand, within GFF2044 at 288.563 kb on - strand, within GFF2044 at 288.563 kb on - strand, within GFF2044 at 288.742 kb on - strand, within GFF2044 at 288.839 kb on + strand, within GFF2044 at 288.839 kb on + strand, within GFF2044 at 288.842 kb on + strand, within GFF2044 at 288.843 kb on - strand, within GFF2044 at 288.843 kb on - strand, within GFF2044 at 288.843 kb on - strand, within GFF2044 at 288.958 kb on - strand, within GFF2044 at 288.958 kb on - strand, within GFF2044 at 288.988 kb on - strand, within GFF2044 at 288.988 kb on - strand, within GFF2044 at 289.224 kb on + strand at 289.224 kb on + strand at 289.224 kb on + strand at 289.225 kb on - strand at 289.225 kb on - strand at 289.555 kb on + strand, within GFF2045 at 289.556 kb on - strand, within GFF2045 at 289.556 kb on - strand, within GFF2045 at 289.556 kb on - strand, within GFF2045 at 289.778 kb on + strand at 289.779 kb on - strand at 289.779 kb on - strand at 289.779 kb on - strand at 289.995 kb on - strand, within GFF2046 at 289.995 kb on - strand, within GFF2046 at 290.051 kb on + strand, within GFF2046 at 290.144 kb on + strand, within GFF2046 at 290.243 kb on + strand, within GFF2046 at 290.244 kb on - strand, within GFF2046 at 290.267 kb on + strand, within GFF2046 at 290.267 kb on + strand, within GFF2046 at 290.268 kb on - strand, within GFF2046 at 290.268 kb on - strand, within GFF2046 at 290.268 kb on - strand, within GFF2046 at 290.268 kb on - strand, within GFF2046 at 290.268 kb on - strand, within GFF2046 at 290.268 kb on - strand, within GFF2046 at 290.290 kb on + strand, within GFF2046 at 290.290 kb on + strand, within GFF2046 at 290.290 kb on + strand, within GFF2046 at 290.290 kb on + strand, within GFF2046 at 290.290 kb on + strand, within GFF2046 at 290.291 kb on - strand, within GFF2046 at 290.291 kb on - strand, within GFF2046 at 290.291 kb on - strand, within GFF2046 at 290.659 kb on + strand, within GFF2046
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 288,325 + -0.2 288,326 - +0.8 288,326 - +0.8 288,333 + -0.7 288,333 + -0.8 288,333 + +0.8 288,376 + +0.5 288,377 - +0.3 288,377 - -0.4 288,377 - -0.7 288,377 - +1.1 288,378 + +0.2 288,379 - -0.1 288,379 - -0.2 288,379 - -1.1 288,413 + +0.1 288,414 - -0.1 288,451 - +0.7 288,451 - +0.9 288,451 - -0.5 288,562 + GFF2044 0.20 +0.4 288,562 + GFF2044 0.20 +1.5 288,563 - GFF2044 0.20 +0.4 288,563 - GFF2044 0.20 -1.3 288,742 - GFF2044 0.42 +0.5 288,839 + GFF2044 0.53 +1.8 288,839 + GFF2044 0.53 +0.4 288,842 + GFF2044 0.54 -0.6 288,843 - GFF2044 0.54 -0.6 288,843 - GFF2044 0.54 +0.1 288,843 - GFF2044 0.54 -1.2 288,958 - GFF2044 0.68 -0.1 288,958 - GFF2044 0.68 +0.0 288,988 - GFF2044 0.72 -0.8 288,988 - GFF2044 0.72 +0.7 289,224 + +0.9 289,224 + +0.0 289,224 + -0.2 289,225 - -0.1 289,225 - +0.4 289,555 + GFF2045 0.60 -1.1 289,556 - GFF2045 0.61 -0.9 289,556 - GFF2045 0.61 -0.7 289,556 - GFF2045 0.61 -0.0 289,778 + -0.3 289,779 - +1.2 289,779 - -0.4 289,779 - -0.5 289,995 - GFF2046 0.24 +0.5 289,995 - GFF2046 0.24 -1.5 290,051 + GFF2046 0.28 +1.5 290,144 + GFF2046 0.36 +0.9 290,243 + GFF2046 0.44 +0.2 290,244 - GFF2046 0.44 -0.6 290,267 + GFF2046 0.46 +0.1 290,267 + GFF2046 0.46 +0.7 290,268 - GFF2046 0.46 -0.2 290,268 - GFF2046 0.46 -0.4 290,268 - GFF2046 0.46 -1.1 290,268 - GFF2046 0.46 +0.5 290,268 - GFF2046 0.46 -0.8 290,268 - GFF2046 0.46 +0.2 290,290 + GFF2046 0.48 +0.2 290,290 + GFF2046 0.48 +0.4 290,290 + GFF2046 0.48 +0.4 290,290 + GFF2046 0.48 -0.5 290,290 + GFF2046 0.48 -0.7 290,291 - GFF2046 0.48 +0.2 290,291 - GFF2046 0.48 -0.7 290,291 - GFF2046 0.48 -1.6 290,659 + GFF2046 0.79 -0.2
Or see this region's nucleotide sequence