Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF19 and GFF20 are separated by 171 nucleotides GFF20 and GFF21 are separated by 70 nucleotides GFF21 and GFF22 overlap by 4 nucleotides
GFF19 - Esterase EstA, at 16,701 to 18,608
GFF19
GFF20 - Anthranilate synthase component 1, at 18,780 to 20,261
GFF20
GFF21 - Phosphoglycolate phosphatase, at 20,332 to 21,150
GFF21
GFF22 - Ribulose-phosphate 3-epimerase, at 21,147 to 21,821
GFF22
Position (kb) 18
19
20
21 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 17.886 kb on + strand, within GFF19 at 17.886 kb on + strand, within GFF19 at 17.886 kb on + strand, within GFF19 at 17.887 kb on - strand, within GFF19 at 17.985 kb on + strand, within GFF19 at 17.985 kb on + strand, within GFF19 at 17.986 kb on - strand, within GFF19 at 17.986 kb on - strand, within GFF19 at 17.986 kb on - strand, within GFF19 at 17.986 kb on - strand, within GFF19 at 17.986 kb on - strand, within GFF19 at 17.986 kb on - strand, within GFF19 at 17.986 kb on - strand, within GFF19 at 17.986 kb on - strand, within GFF19 at 18.163 kb on - strand, within GFF19 at 18.163 kb on - strand, within GFF19 at 18.220 kb on - strand, within GFF19 at 18.333 kb on + strand, within GFF19 at 18.333 kb on + strand, within GFF19 at 18.334 kb on - strand, within GFF19 at 18.334 kb on - strand, within GFF19 at 18.334 kb on - strand, within GFF19 at 18.334 kb on - strand, within GFF19 at 18.388 kb on - strand, within GFF19 at 18.541 kb on - strand at 18.542 kb on + strand at 18.542 kb on + strand at 18.542 kb on + strand at 18.542 kb on + strand at 18.542 kb on + strand at 18.542 kb on + strand at 18.542 kb on + strand at 18.542 kb on + strand at 18.543 kb on - strand at 18.543 kb on - strand at 18.543 kb on - strand at 18.543 kb on - strand at 18.543 kb on - strand at 18.543 kb on - strand at 18.543 kb on - strand at 18.664 kb on - strand at 18.678 kb on + strand at 18.678 kb on + strand at 18.678 kb on + strand at 18.678 kb on + strand at 18.679 kb on - strand at 19.067 kb on + strand, within GFF20 at 19.068 kb on - strand, within GFF20 at 19.068 kb on - strand, within GFF20 at 19.435 kb on + strand, within GFF20 at 19.435 kb on + strand, within GFF20 at 19.435 kb on + strand, within GFF20 at 19.435 kb on + strand, within GFF20 at 19.435 kb on + strand, within GFF20 at 19.436 kb on - strand, within GFF20 at 19.436 kb on - strand, within GFF20 at 19.436 kb on - strand, within GFF20 at 19.436 kb on - strand, within GFF20 at 19.436 kb on - strand, within GFF20 at 19.436 kb on - strand, within GFF20 at 19.436 kb on - strand, within GFF20 at 19.436 kb on - strand, within GFF20 at 19.436 kb on - strand, within GFF20 at 19.436 kb on - strand, within GFF20 at 19.436 kb on - strand, within GFF20 at 19.441 kb on + strand, within GFF20 at 19.441 kb on + strand, within GFF20 at 19.441 kb on + strand, within GFF20 at 19.441 kb on + strand, within GFF20 at 19.442 kb on - strand, within GFF20 at 19.442 kb on - strand, within GFF20 at 19.442 kb on - strand, within GFF20 at 19.555 kb on + strand, within GFF20 at 19.555 kb on + strand, within GFF20 at 19.555 kb on + strand, within GFF20 at 19.555 kb on + strand, within GFF20 at 19.555 kb on + strand, within GFF20 at 19.555 kb on + strand, within GFF20 at 19.555 kb on + strand, within GFF20 at 19.555 kb on + strand, within GFF20 at 19.555 kb on + strand, within GFF20 at 19.556 kb on - strand, within GFF20 at 19.556 kb on - strand, within GFF20 at 19.556 kb on - strand, within GFF20 at 19.556 kb on - strand, within GFF20 at 19.556 kb on - strand, within GFF20 at 19.873 kb on + strand, within GFF20 at 19.873 kb on + strand, within GFF20 at 19.888 kb on + strand, within GFF20 at 19.889 kb on - strand, within GFF20 at 19.897 kb on + strand, within GFF20 at 19.897 kb on + strand, within GFF20 at 20.131 kb on + strand at 20.131 kb on + strand at 20.132 kb on - strand at 20.132 kb on - strand at 20.132 kb on - strand at 20.161 kb on + strand at 20.162 kb on - strand at 20.222 kb on - strand at 20.222 kb on - strand at 20.261 kb on + strand at 20.261 kb on + strand at 20.262 kb on - strand at 20.297 kb on + strand at 20.297 kb on + strand at 20.298 kb on - strand at 20.476 kb on + strand, within GFF21 at 20.477 kb on - strand, within GFF21 at 20.540 kb on + strand, within GFF21 at 20.541 kb on - strand, within GFF21 at 20.546 kb on + strand, within GFF21 at 20.547 kb on - strand, within GFF21 at 20.547 kb on - strand, within GFF21 at 20.723 kb on + strand, within GFF21 at 20.723 kb on + strand, within GFF21 at 20.724 kb on - strand, within GFF21 at 20.724 kb on - strand, within GFF21 at 20.724 kb on - strand, within GFF21 at 20.844 kb on - strand, within GFF21
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 17,886 + GFF19 0.62 +0.2 17,886 + GFF19 0.62 -1.1 17,886 + GFF19 0.62 +0.3 17,887 - GFF19 0.62 +1.2 17,985 + GFF19 0.67 +0.2 17,985 + GFF19 0.67 -0.9 17,986 - GFF19 0.67 +0.0 17,986 - GFF19 0.67 -0.3 17,986 - GFF19 0.67 +0.2 17,986 - GFF19 0.67 -0.3 17,986 - GFF19 0.67 -0.2 17,986 - GFF19 0.67 -0.5 17,986 - GFF19 0.67 +0.4 17,986 - GFF19 0.67 -1.1 18,163 - GFF19 0.77 +0.5 18,163 - GFF19 0.77 +0.7 18,220 - GFF19 0.80 -0.4 18,333 + GFF19 0.86 +0.3 18,333 + GFF19 0.86 +0.4 18,334 - GFF19 0.86 -1.0 18,334 - GFF19 0.86 -1.4 18,334 - GFF19 0.86 -0.1 18,334 - GFF19 0.86 +0.1 18,388 - GFF19 0.88 -0.6 18,541 - +0.8 18,542 + +1.0 18,542 + -0.0 18,542 + -0.6 18,542 + +0.7 18,542 + -0.6 18,542 + +1.5 18,542 + +1.0 18,542 + +1.8 18,543 - +1.2 18,543 - +0.0 18,543 - +0.4 18,543 - -0.4 18,543 - -0.5 18,543 - +0.4 18,543 - -0.6 18,664 - +0.3 18,678 + +1.1 18,678 + -1.1 18,678 + +0.1 18,678 + -0.6 18,679 - -0.1 19,067 + GFF20 0.19 -3.8 19,068 - GFF20 0.19 -3.2 19,068 - GFF20 0.19 -2.6 19,435 + GFF20 0.44 -4.3 19,435 + GFF20 0.44 -3.6 19,435 + GFF20 0.44 -3.2 19,435 + GFF20 0.44 -1.8 19,435 + GFF20 0.44 -2.7 19,436 - GFF20 0.44 -1.3 19,436 - GFF20 0.44 -3.6 19,436 - GFF20 0.44 -3.1 19,436 - GFF20 0.44 -2.6 19,436 - GFF20 0.44 -2.8 19,436 - GFF20 0.44 -3.2 19,436 - GFF20 0.44 -1.8 19,436 - GFF20 0.44 -2.8 19,436 - GFF20 0.44 -1.7 19,436 - GFF20 0.44 -3.4 19,436 - GFF20 0.44 -2.8 19,441 + GFF20 0.45 -2.4 19,441 + GFF20 0.45 -2.6 19,441 + GFF20 0.45 -3.2 19,441 + GFF20 0.45 -2.3 19,442 - GFF20 0.45 -0.8 19,442 - GFF20 0.45 -0.6 19,442 - GFF20 0.45 -3.0 19,555 + GFF20 0.52 -1.8 19,555 + GFF20 0.52 -3.5 19,555 + GFF20 0.52 -1.8 19,555 + GFF20 0.52 -3.1 19,555 + GFF20 0.52 -2.0 19,555 + GFF20 0.52 +0.2 19,555 + GFF20 0.52 -4.3 19,555 + GFF20 0.52 -3.2 19,555 + GFF20 0.52 -1.8 19,556 - GFF20 0.52 -2.9 19,556 - GFF20 0.52 -3.0 19,556 - GFF20 0.52 -1.8 19,556 - GFF20 0.52 -1.3 19,556 - GFF20 0.52 -3.4 19,873 + GFF20 0.74 -2.9 19,873 + GFF20 0.74 -2.7 19,888 + GFF20 0.75 -2.5 19,889 - GFF20 0.75 -2.8 19,897 + GFF20 0.75 -2.4 19,897 + GFF20 0.75 -1.7 20,131 + -4.3 20,131 + -2.6 20,132 - -1.4 20,132 - -2.5 20,132 - -1.4 20,161 + -1.8 20,162 - -3.5 20,222 - -1.8 20,222 - -4.6 20,261 + -2.2 20,261 + -1.5 20,262 - -0.8 20,297 + -1.8 20,297 + -1.3 20,298 - +0.3 20,476 + GFF21 0.18 -0.6 20,477 - GFF21 0.18 -0.5 20,540 + GFF21 0.25 +1.3 20,541 - GFF21 0.26 +0.4 20,546 + GFF21 0.26 -0.3 20,547 - GFF21 0.26 +1.0 20,547 - GFF21 0.26 +0.4 20,723 + GFF21 0.48 -2.8 20,723 + GFF21 0.48 -0.3 20,724 - GFF21 0.48 +0.6 20,724 - GFF21 0.48 -0.3 20,724 - GFF21 0.48 -0.9 20,844 - GFF21 0.63 +0.3
Or see this region's nucleotide sequence