Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1822 and GFF1823 are separated by 29 nucleotides GFF1823 and GFF1824 are separated by 34 nucleotides GFF1824 and GFF1825 are separated by 15 nucleotides GFF1825 and GFF1826 are separated by 2 nucleotides
GFF1822 - Superoxide dismutase [Mn/Fe], at 35,257 to 35,868
GFF1822
GFF1823 - Zinc transporter ZupT, at 35,898 to 36,791
GFF1823
GFF1824 - Phosphocarrier protein NPr, at 36,826 to 37,101
GFF1824
GFF1825 - RNase adapter protein RapZ, at 37,117 to 37,974
GFF1825
GFF1826 - Nitrogen regulatory protein, at 37,977 to 38,441
GFF1826
Position (kb) 36
37
38 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 35.897 kb on + strand at 35.897 kb on + strand at 36.282 kb on + strand, within GFF1823 at 36.282 kb on + strand, within GFF1823 at 36.282 kb on + strand, within GFF1823 at 36.282 kb on + strand, within GFF1823 at 36.282 kb on + strand, within GFF1823 at 36.283 kb on - strand, within GFF1823 at 36.283 kb on - strand, within GFF1823 at 36.587 kb on - strand, within GFF1823 at 36.598 kb on + strand, within GFF1823 at 36.828 kb on - strand at 37.071 kb on + strand, within GFF1824 at 37.072 kb on - strand, within GFF1824 at 37.072 kb on - strand, within GFF1824 at 37.118 kb on + strand at 37.118 kb on + strand at 37.119 kb on - strand at 37.119 kb on - strand at 37.194 kb on - strand at 37.194 kb on - strand at 37.286 kb on + strand, within GFF1825 at 37.286 kb on + strand, within GFF1825 at 37.287 kb on - strand, within GFF1825 at 37.292 kb on + strand, within GFF1825 at 37.292 kb on + strand, within GFF1825 at 37.292 kb on + strand, within GFF1825 at 37.292 kb on + strand, within GFF1825 at 37.292 kb on + strand, within GFF1825 at 37.292 kb on + strand, within GFF1825 at 37.292 kb on + strand, within GFF1825 at 37.292 kb on + strand, within GFF1825 at 37.292 kb on + strand, within GFF1825 at 37.293 kb on - strand, within GFF1825 at 37.293 kb on - strand, within GFF1825 at 37.293 kb on - strand, within GFF1825 at 37.293 kb on - strand, within GFF1825 at 37.293 kb on - strand, within GFF1825 at 37.293 kb on - strand, within GFF1825 at 37.293 kb on - strand, within GFF1825 at 37.293 kb on - strand, within GFF1825 at 37.338 kb on - strand, within GFF1825 at 37.521 kb on + strand, within GFF1825 at 37.535 kb on + strand, within GFF1825 at 37.709 kb on + strand, within GFF1825 at 37.710 kb on - strand, within GFF1825 at 37.710 kb on - strand, within GFF1825 at 37.895 kb on + strand at 37.896 kb on - strand at 37.896 kb on - strand at 37.896 kb on - strand at 37.899 kb on - strand at 37.899 kb on - strand at 37.929 kb on + strand at 37.978 kb on + strand at 37.978 kb on + strand at 37.978 kb on + strand at 37.979 kb on - strand at 37.979 kb on - strand at 37.979 kb on - strand at 37.979 kb on - strand at 38.002 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 35,897 + -0.6 35,897 + +0.3 36,282 + GFF1823 0.43 -0.5 36,282 + GFF1823 0.43 -0.2 36,282 + GFF1823 0.43 -0.3 36,282 + GFF1823 0.43 -0.1 36,282 + GFF1823 0.43 -0.6 36,283 - GFF1823 0.43 +0.0 36,283 - GFF1823 0.43 +1.6 36,587 - GFF1823 0.77 +0.4 36,598 + GFF1823 0.78 +0.1 36,828 - -0.0 37,071 + GFF1824 0.89 -1.8 37,072 - GFF1824 0.89 -1.7 37,072 - GFF1824 0.89 -4.0 37,118 + -0.6 37,118 + +1.3 37,119 - -0.4 37,119 - +0.1 37,194 - +0.1 37,194 - -1.5 37,286 + GFF1825 0.20 +2.1 37,286 + GFF1825 0.20 -0.2 37,287 - GFF1825 0.20 +0.8 37,292 + GFF1825 0.20 -0.1 37,292 + GFF1825 0.20 +0.3 37,292 + GFF1825 0.20 -1.1 37,292 + GFF1825 0.20 +0.2 37,292 + GFF1825 0.20 +0.9 37,292 + GFF1825 0.20 +0.0 37,292 + GFF1825 0.20 +0.7 37,292 + GFF1825 0.20 -1.0 37,292 + GFF1825 0.20 +0.7 37,293 - GFF1825 0.21 +0.0 37,293 - GFF1825 0.21 -0.2 37,293 - GFF1825 0.21 -1.0 37,293 - GFF1825 0.21 -0.4 37,293 - GFF1825 0.21 -1.7 37,293 - GFF1825 0.21 +0.1 37,293 - GFF1825 0.21 -0.7 37,293 - GFF1825 0.21 +0.5 37,338 - GFF1825 0.26 -0.6 37,521 + GFF1825 0.47 +0.9 37,535 + GFF1825 0.49 -0.2 37,709 + GFF1825 0.69 -3.1 37,710 - GFF1825 0.69 -0.9 37,710 - GFF1825 0.69 -0.0 37,895 + +0.9 37,896 - +0.4 37,896 - -1.6 37,896 - +1.3 37,899 - -2.1 37,899 - -1.6 37,929 + +1.9 37,978 + +0.3 37,978 + +1.1 37,978 + +1.4 37,979 - -0.7 37,979 - +0.8 37,979 - -0.9 37,979 - -1.2 38,002 - +1.5
Or see this region's nucleotide sequence