Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1632 and GFF1633 are separated by 142 nucleotides GFF1633 and GFF1634 are separated by 66 nucleotides GFF1634 and GFF1635 are separated by 158 nucleotides
GFF1632 - HTH-type transcriptional regulator PuuR, at 418,693 to 419,241
GFF1632
GFF1633 - hypothetical protein, at 419,384 to 419,668
GFF1633
GFF1634 - hypothetical protein, at 419,735 to 420,166
GFF1634
GFF1635 - hypothetical protein, at 420,325 to 420,747
GFF1635
Position (kb) 419
420 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 418.581 kb on + strand at 418.582 kb on - strand at 418.582 kb on - strand at 418.582 kb on - strand at 418.582 kb on - strand at 418.582 kb on - strand at 418.668 kb on + strand at 418.679 kb on + strand at 418.679 kb on + strand at 418.683 kb on + strand at 418.683 kb on + strand at 418.683 kb on + strand at 418.683 kb on + strand at 418.684 kb on - strand at 418.684 kb on - strand at 418.684 kb on - strand at 418.684 kb on - strand at 418.684 kb on - strand at 418.684 kb on - strand at 418.684 kb on - strand at 418.718 kb on + strand at 418.718 kb on + strand at 418.719 kb on - strand at 418.909 kb on + strand, within GFF1632 at 418.909 kb on + strand, within GFF1632 at 418.910 kb on - strand, within GFF1632 at 419.017 kb on + strand, within GFF1632 at 419.018 kb on - strand, within GFF1632 at 419.149 kb on + strand, within GFF1632 at 419.152 kb on + strand, within GFF1632 at 419.153 kb on - strand, within GFF1632 at 419.153 kb on - strand, within GFF1632 at 419.153 kb on - strand, within GFF1632 at 419.153 kb on - strand, within GFF1632 at 419.211 kb on + strand at 419.211 kb on + strand at 419.355 kb on + strand at 419.355 kb on + strand at 419.355 kb on + strand at 419.356 kb on - strand at 419.356 kb on - strand at 419.356 kb on - strand at 419.356 kb on - strand at 419.356 kb on - strand at 419.445 kb on - strand, within GFF1633 at 419.569 kb on + strand, within GFF1633 at 419.569 kb on + strand, within GFF1633 at 419.659 kb on + strand at 419.713 kb on + strand at 419.713 kb on + strand at 419.714 kb on - strand at 419.737 kb on - strand at 419.737 kb on - strand at 419.741 kb on - strand at 419.811 kb on + strand, within GFF1634 at 419.812 kb on - strand, within GFF1634 at 419.812 kb on - strand, within GFF1634 at 419.928 kb on + strand, within GFF1634 at 420.280 kb on - strand at 420.403 kb on + strand, within GFF1635 at 420.404 kb on - strand, within GFF1635 at 420.404 kb on - strand, within GFF1635 at 420.583 kb on + strand, within GFF1635 at 420.584 kb on - strand, within GFF1635 at 420.584 kb on - strand, within GFF1635 at 420.663 kb on + strand, within GFF1635 at 420.664 kb on - strand, within GFF1635
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 418,581 + +0.0 418,582 - -2.2 418,582 - -1.0 418,582 - -0.9 418,582 - +0.4 418,582 - -0.1 418,668 + -0.4 418,679 + -0.4 418,679 + -0.1 418,683 + -0.1 418,683 + +0.0 418,683 + +0.2 418,683 + -0.5 418,684 - +0.4 418,684 - +1.4 418,684 - +0.0 418,684 - +0.1 418,684 - -0.9 418,684 - -0.1 418,684 - -0.1 418,718 + -0.1 418,718 + +0.3 418,719 - -0.0 418,909 + GFF1632 0.39 +0.4 418,909 + GFF1632 0.39 +0.4 418,910 - GFF1632 0.40 -3.3 419,017 + GFF1632 0.59 -0.0 419,018 - GFF1632 0.59 -0.6 419,149 + GFF1632 0.83 +0.4 419,152 + GFF1632 0.84 -1.4 419,153 - GFF1632 0.84 -0.4 419,153 - GFF1632 0.84 +0.1 419,153 - GFF1632 0.84 -0.6 419,153 - GFF1632 0.84 -0.6 419,211 + +0.1 419,211 + -0.8 419,355 + +0.4 419,355 + +0.4 419,355 + -0.0 419,356 - -0.1 419,356 - -3.0 419,356 - +1.6 419,356 - -1.2 419,356 - +0.5 419,445 - GFF1633 0.21 -1.6 419,569 + GFF1633 0.65 -0.4 419,569 + GFF1633 0.65 -1.7 419,659 + +0.6 419,713 + +0.2 419,713 + +0.4 419,714 - -0.0 419,737 - -0.4 419,737 - +1.0 419,741 - -0.1 419,811 + GFF1634 0.18 -0.3 419,812 - GFF1634 0.18 +0.7 419,812 - GFF1634 0.18 -0.2 419,928 + GFF1634 0.45 +1.6 420,280 - -1.8 420,403 + GFF1635 0.18 +0.3 420,404 - GFF1635 0.19 +0.6 420,404 - GFF1635 0.19 -1.1 420,583 + GFF1635 0.61 -0.7 420,584 - GFF1635 0.61 +0.8 420,584 - GFF1635 0.61 +0.1 420,663 + GFF1635 0.80 +0.4 420,664 - GFF1635 0.80 +0.2
Or see this region's nucleotide sequence