Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1442 and GFF1443 are separated by 50 nucleotides GFF1443 and GFF1444 are separated by 112 nucleotides
GFF1442 - Trigger factor, at 208,009 to 209,319
GFF1442
GFF1443 - ATP-dependent Clp protease proteolytic subunit, at 209,370 to 210,047
GFF1443
GFF1444 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 210,160 to 211,443
GFF1444
Position (kb) 209
210
211 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 208.535 kb on + strand, within GFF1442 at 208.535 kb on + strand, within GFF1442 at 208.535 kb on + strand, within GFF1442 at 208.535 kb on + strand, within GFF1442 at 208.536 kb on - strand, within GFF1442 at 208.536 kb on - strand, within GFF1442 at 208.536 kb on - strand, within GFF1442 at 208.571 kb on + strand, within GFF1442 at 208.571 kb on + strand, within GFF1442 at 208.572 kb on - strand, within GFF1442 at 208.623 kb on + strand, within GFF1442 at 208.669 kb on + strand, within GFF1442 at 208.670 kb on - strand, within GFF1442 at 208.737 kb on + strand, within GFF1442 at 208.738 kb on - strand, within GFF1442 at 208.738 kb on - strand, within GFF1442 at 208.878 kb on - strand, within GFF1442 at 209.138 kb on - strand, within GFF1442 at 209.167 kb on + strand, within GFF1442 at 209.167 kb on + strand, within GFF1442 at 209.167 kb on + strand, within GFF1442 at 209.170 kb on + strand, within GFF1442 at 209.170 kb on + strand, within GFF1442 at 209.171 kb on - strand, within GFF1442 at 209.171 kb on - strand, within GFF1442 at 209.171 kb on - strand, within GFF1442 at 209.250 kb on + strand at 209.250 kb on + strand at 209.251 kb on - strand at 209.275 kb on + strand at 209.297 kb on + strand at 209.333 kb on - strand at 209.347 kb on + strand at 209.347 kb on + strand at 209.347 kb on + strand at 209.347 kb on + strand at 209.347 kb on + strand at 209.348 kb on - strand at 209.348 kb on - strand at 209.369 kb on + strand at 209.370 kb on - strand at 209.370 kb on - strand at 209.376 kb on - strand at 209.376 kb on - strand at 209.386 kb on + strand at 209.386 kb on + strand at 209.386 kb on + strand at 209.386 kb on + strand at 209.386 kb on + strand at 209.386 kb on + strand at 209.386 kb on + strand at 209.386 kb on + strand at 209.386 kb on + strand at 209.387 kb on - strand at 209.387 kb on - strand at 209.387 kb on - strand at 209.390 kb on + strand at 209.390 kb on + strand at 209.390 kb on + strand at 209.390 kb on + strand at 209.390 kb on + strand at 209.390 kb on + strand at 209.390 kb on + strand at 209.391 kb on - strand at 209.427 kb on + strand at 209.428 kb on - strand at 209.429 kb on + strand at 209.429 kb on + strand at 209.430 kb on - strand at 209.512 kb on - strand, within GFF1443 at 209.520 kb on + strand, within GFF1443 at 209.521 kb on - strand, within GFF1443 at 209.521 kb on - strand, within GFF1443 at 209.521 kb on - strand, within GFF1443 at 209.574 kb on + strand, within GFF1443 at 209.574 kb on + strand, within GFF1443 at 209.575 kb on - strand, within GFF1443 at 209.575 kb on - strand, within GFF1443 at 209.575 kb on - strand, within GFF1443 at 209.575 kb on - strand, within GFF1443 at 209.575 kb on - strand, within GFF1443 at 209.575 kb on - strand, within GFF1443 at 209.575 kb on - strand, within GFF1443 at 209.646 kb on + strand, within GFF1443 at 209.646 kb on + strand, within GFF1443 at 209.647 kb on - strand, within GFF1443 at 209.647 kb on - strand, within GFF1443 at 209.722 kb on + strand, within GFF1443 at 209.723 kb on - strand, within GFF1443 at 209.939 kb on + strand, within GFF1443 at 210.045 kb on + strand at 210.045 kb on + strand at 210.046 kb on - strand at 210.048 kb on + strand at 210.048 kb on + strand at 210.048 kb on + strand at 210.048 kb on + strand at 210.048 kb on + strand at 210.048 kb on + strand at 210.048 kb on + strand at 210.049 kb on - strand at 210.049 kb on - strand at 210.049 kb on - strand at 210.050 kb on + strand at 210.050 kb on + strand at 210.050 kb on + strand at 210.050 kb on + strand at 210.050 kb on + strand at 210.050 kb on + strand at 210.050 kb on + strand at 210.051 kb on - strand at 210.051 kb on - strand at 210.051 kb on - strand at 210.051 kb on - strand at 210.051 kb on - strand at 210.051 kb on - strand at 210.051 kb on - strand at 210.051 kb on - strand at 210.051 kb on - strand at 210.051 kb on - strand at 210.051 kb on - strand at 210.051 kb on - strand at 210.114 kb on + strand at 210.114 kb on + strand at 210.115 kb on - strand at 210.203 kb on - strand at 210.203 kb on - strand at 210.203 kb on - strand at 210.349 kb on - strand, within GFF1444 at 210.349 kb on - strand, within GFF1444 at 210.391 kb on + strand, within GFF1444 at 210.439 kb on + strand, within GFF1444 at 210.440 kb on - strand, within GFF1444 at 210.448 kb on + strand, within GFF1444 at 210.623 kb on - strand, within GFF1444 at 210.623 kb on - strand, within GFF1444 at 210.623 kb on - strand, within GFF1444 at 210.709 kb on + strand, within GFF1444 at 210.710 kb on - strand, within GFF1444 at 210.710 kb on - strand, within GFF1444
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 208,535 + GFF1442 0.40 +0.0 208,535 + GFF1442 0.40 +0.3 208,535 + GFF1442 0.40 -1.7 208,535 + GFF1442 0.40 -1.0 208,536 - GFF1442 0.40 -0.2 208,536 - GFF1442 0.40 -0.7 208,536 - GFF1442 0.40 -0.7 208,571 + GFF1442 0.43 -0.2 208,571 + GFF1442 0.43 +2.8 208,572 - GFF1442 0.43 -1.5 208,623 + GFF1442 0.47 -0.1 208,669 + GFF1442 0.50 -1.6 208,670 - GFF1442 0.50 -0.2 208,737 + GFF1442 0.56 +0.7 208,738 - GFF1442 0.56 -0.4 208,738 - GFF1442 0.56 +0.1 208,878 - GFF1442 0.66 -0.4 209,138 - GFF1442 0.86 +0.2 209,167 + GFF1442 0.88 +0.0 209,167 + GFF1442 0.88 -0.6 209,167 + GFF1442 0.88 -0.3 209,170 + GFF1442 0.89 +0.7 209,170 + GFF1442 0.89 +1.0 209,171 - GFF1442 0.89 +0.8 209,171 - GFF1442 0.89 +0.3 209,171 - GFF1442 0.89 -0.6 209,250 + -0.1 209,250 + -0.3 209,251 - -0.6 209,275 + -1.0 209,297 + -0.7 209,333 - +0.2 209,347 + +0.6 209,347 + -1.4 209,347 + -0.5 209,347 + -0.2 209,347 + -0.3 209,348 - -0.9 209,348 - +0.8 209,369 + +0.6 209,370 - -1.4 209,370 - +1.0 209,376 - -2.0 209,376 - -0.6 209,386 + +0.1 209,386 + -0.3 209,386 + -0.1 209,386 + -0.2 209,386 + +0.2 209,386 + -0.3 209,386 + -1.1 209,386 + +0.6 209,386 + +0.3 209,387 - -1.6 209,387 - -0.9 209,387 - +0.4 209,390 + -0.0 209,390 + +0.1 209,390 + -1.0 209,390 + -0.2 209,390 + -2.5 209,390 + -0.8 209,390 + +0.4 209,391 - +0.0 209,427 + -0.6 209,428 - +0.4 209,429 + -0.6 209,429 + -1.1 209,430 - -0.4 209,512 - GFF1443 0.21 -0.1 209,520 + GFF1443 0.22 -0.6 209,521 - GFF1443 0.22 -0.1 209,521 - GFF1443 0.22 -1.1 209,521 - GFF1443 0.22 -1.7 209,574 + GFF1443 0.30 +0.1 209,574 + GFF1443 0.30 -0.1 209,575 - GFF1443 0.30 -1.1 209,575 - GFF1443 0.30 -0.4 209,575 - GFF1443 0.30 -0.6 209,575 - GFF1443 0.30 +0.7 209,575 - GFF1443 0.30 -0.1 209,575 - GFF1443 0.30 -0.3 209,575 - GFF1443 0.30 -0.3 209,646 + GFF1443 0.41 -2.0 209,646 + GFF1443 0.41 -1.1 209,647 - GFF1443 0.41 -0.9 209,647 - GFF1443 0.41 -0.6 209,722 + GFF1443 0.52 -1.1 209,723 - GFF1443 0.52 -0.6 209,939 + GFF1443 0.84 -0.6 210,045 + +0.3 210,045 + -0.9 210,046 - -0.4 210,048 + +0.1 210,048 + -2.2 210,048 + +0.3 210,048 + +1.0 210,048 + -0.0 210,048 + +1.1 210,048 + -0.1 210,049 - +0.9 210,049 - -1.4 210,049 - -1.1 210,050 + -0.9 210,050 + -1.1 210,050 + -0.7 210,050 + +1.6 210,050 + -0.0 210,050 + +2.4 210,050 + +0.4 210,051 - -0.5 210,051 - +0.1 210,051 - -0.1 210,051 - +0.0 210,051 - -0.1 210,051 - -0.5 210,051 - +0.3 210,051 - -1.4 210,051 - -0.6 210,051 - +0.1 210,051 - +0.7 210,051 - +0.8 210,114 + -0.3 210,114 + +0.6 210,115 - -0.1 210,203 - +1.0 210,203 - +0.0 210,203 - +0.2 210,349 - GFF1444 0.15 -0.6 210,349 - GFF1444 0.15 -0.6 210,391 + GFF1444 0.18 -0.6 210,439 + GFF1444 0.22 +0.4 210,440 - GFF1444 0.22 -1.4 210,448 + GFF1444 0.22 -1.1 210,623 - GFF1444 0.36 -0.6 210,623 - GFF1444 0.36 -0.9 210,623 - GFF1444 0.36 -1.6 210,709 + GFF1444 0.43 -0.9 210,710 - GFF1444 0.43 -2.1 210,710 - GFF1444 0.43 -0.6
Or see this region's nucleotide sequence