Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1274 and GFF1275 are separated by 144 nucleotides GFF1275 and GFF1276 are separated by 106 nucleotides GFF1276 and GFF1277 are separated by 97 nucleotides GFF1277 and GFF1278 are separated by 10 nucleotides
GFF1274 - DNA topoisomerase 1, at 23,746 to 26,379
GFF1274
GFF1275 - hypothetical protein, at 26,524 to 27,048
GFF1275
GFF1276 - hypothetical protein, at 27,155 to 27,388
GFF1276
GFF1277 - Cell division inhibitor SulA, at 27,486 to 27,959
GFF1277
GFF1278 - LexA repressor, at 27,970 to 28,578
GFF1278
Position (kb) 27
28 Strain fitness (log2 ratio) -2
-1
0
1
2 at 26.188 kb on + strand at 26.188 kb on + strand at 26.272 kb on + strand at 26.273 kb on - strand at 26.318 kb on - strand at 26.320 kb on + strand at 26.321 kb on - strand at 26.377 kb on + strand at 26.378 kb on - strand at 26.378 kb on - strand at 26.384 kb on + strand at 26.539 kb on + strand at 26.540 kb on - strand at 26.563 kb on + strand at 26.564 kb on - strand at 26.669 kb on + strand, within GFF1275 at 26.669 kb on + strand, within GFF1275 at 26.669 kb on + strand, within GFF1275 at 26.669 kb on + strand, within GFF1275 at 26.669 kb on + strand, within GFF1275 at 26.669 kb on + strand, within GFF1275 at 26.669 kb on + strand, within GFF1275 at 26.669 kb on + strand, within GFF1275 at 26.669 kb on + strand, within GFF1275 at 26.670 kb on - strand, within GFF1275 at 26.670 kb on - strand, within GFF1275 at 26.670 kb on - strand, within GFF1275 at 26.670 kb on - strand, within GFF1275 at 26.670 kb on - strand, within GFF1275 at 26.671 kb on + strand, within GFF1275 at 26.672 kb on - strand, within GFF1275 at 26.714 kb on - strand, within GFF1275 at 26.935 kb on - strand, within GFF1275 at 26.935 kb on - strand, within GFF1275 at 27.051 kb on + strand at 27.052 kb on - strand at 27.052 kb on - strand at 27.052 kb on - strand at 27.119 kb on + strand at 27.119 kb on + strand at 27.120 kb on - strand at 27.120 kb on - strand at 27.120 kb on - strand at 27.120 kb on - strand at 27.121 kb on + strand at 27.121 kb on + strand at 27.121 kb on + strand at 27.122 kb on - strand at 27.122 kb on - strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.124 kb on - strand at 27.124 kb on - strand at 27.124 kb on - strand at 27.124 kb on - strand at 27.124 kb on - strand at 27.152 kb on + strand at 27.152 kb on + strand at 27.152 kb on + strand at 27.152 kb on + strand at 27.152 kb on + strand at 27.152 kb on + strand at 27.152 kb on + strand at 27.152 kb on + strand at 27.152 kb on + strand at 27.152 kb on + strand at 27.152 kb on + strand at 27.152 kb on + strand at 27.153 kb on - strand at 27.153 kb on - strand at 27.153 kb on - strand at 27.153 kb on - strand at 27.153 kb on - strand at 27.153 kb on - strand at 27.153 kb on - strand at 27.154 kb on + strand at 27.154 kb on + strand at 27.154 kb on + strand at 27.154 kb on + strand at 27.154 kb on + strand at 27.155 kb on - strand at 27.155 kb on - strand at 27.155 kb on - strand at 27.155 kb on - strand at 27.337 kb on + strand, within GFF1276 at 27.337 kb on + strand, within GFF1276 at 27.337 kb on + strand, within GFF1276 at 27.337 kb on + strand, within GFF1276 at 27.338 kb on - strand, within GFF1276 at 27.338 kb on - strand, within GFF1276 at 27.358 kb on + strand, within GFF1276 at 27.358 kb on + strand, within GFF1276 at 27.359 kb on - strand, within GFF1276 at 27.476 kb on + strand at 27.477 kb on - strand at 27.477 kb on - strand at 27.477 kb on - strand at 27.573 kb on + strand, within GFF1277 at 27.573 kb on + strand, within GFF1277 at 27.574 kb on - strand, within GFF1277 at 27.825 kb on + strand, within GFF1277 at 27.825 kb on + strand, within GFF1277 at 27.825 kb on + strand, within GFF1277 at 27.825 kb on + strand, within GFF1277 at 27.825 kb on + strand, within GFF1277 at 27.826 kb on - strand, within GFF1277 at 27.826 kb on - strand, within GFF1277 at 27.826 kb on - strand, within GFF1277 at 28.162 kb on - strand, within GFF1278 at 28.194 kb on + strand, within GFF1278 at 28.235 kb on + strand, within GFF1278 at 28.236 kb on - strand, within GFF1278 at 28.377 kb on + strand, within GFF1278 at 28.378 kb on - strand, within GFF1278 at 28.378 kb on - strand, within GFF1278
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 26,188 + +0.1 26,188 + -0.1 26,272 + -0.6 26,273 - -1.1 26,318 - -1.1 26,320 + +0.4 26,321 - -0.6 26,377 + -0.0 26,378 - +0.2 26,378 - -0.3 26,384 + +2.0 26,539 + +1.2 26,540 - -1.6 26,563 + -1.7 26,564 - -0.6 26,669 + GFF1275 0.28 -1.0 26,669 + GFF1275 0.28 -0.8 26,669 + GFF1275 0.28 -1.0 26,669 + GFF1275 0.28 -0.9 26,669 + GFF1275 0.28 -1.8 26,669 + GFF1275 0.28 -0.6 26,669 + GFF1275 0.28 -0.6 26,669 + GFF1275 0.28 -1.1 26,669 + GFF1275 0.28 -0.9 26,670 - GFF1275 0.28 -1.3 26,670 - GFF1275 0.28 -0.6 26,670 - GFF1275 0.28 -2.7 26,670 - GFF1275 0.28 -1.6 26,670 - GFF1275 0.28 -2.0 26,671 + GFF1275 0.28 -1.4 26,672 - GFF1275 0.28 -1.4 26,714 - GFF1275 0.36 -1.6 26,935 - GFF1275 0.78 -1.1 26,935 - GFF1275 0.78 -1.6 27,051 + -0.5 27,052 - +0.6 27,052 - -2.2 27,052 - +0.5 27,119 + -0.4 27,119 + -0.3 27,120 - +0.4 27,120 - +0.4 27,120 - -0.6 27,120 - +0.2 27,121 + +0.1 27,121 + +0.1 27,121 + +0.4 27,122 - -0.6 27,122 - +0.7 27,123 + +1.0 27,123 + +0.0 27,123 + -0.5 27,123 + -0.7 27,123 + -0.6 27,123 + -0.7 27,123 + +0.2 27,123 + +0.4 27,123 + -0.3 27,123 + -0.3 27,124 - +0.1 27,124 - +0.3 27,124 - -0.3 27,124 - +0.2 27,124 - +1.1 27,152 + +1.1 27,152 + +0.2 27,152 + -0.4 27,152 + +0.7 27,152 + +1.1 27,152 + +0.3 27,152 + -0.3 27,152 + -0.1 27,152 + +0.3 27,152 + -0.3 27,152 + +0.3 27,152 + -1.0 27,153 - -0.6 27,153 - -0.7 27,153 - -0.1 27,153 - -1.8 27,153 - -1.2 27,153 - -0.8 27,153 - -2.1 27,154 + -0.9 27,154 + -1.6 27,154 + -0.9 27,154 + +1.0 27,154 + +0.4 27,155 - +0.4 27,155 - -1.0 27,155 - +1.7 27,155 - -0.5 27,337 + GFF1276 0.78 -0.8 27,337 + GFF1276 0.78 -1.1 27,337 + GFF1276 0.78 -0.1 27,337 + GFF1276 0.78 -1.1 27,338 - GFF1276 0.78 -1.6 27,338 - GFF1276 0.78 -0.6 27,358 + GFF1276 0.87 -0.7 27,358 + GFF1276 0.87 -0.1 27,359 - GFF1276 0.87 +0.7 27,476 + +1.2 27,477 - +0.1 27,477 - -0.4 27,477 - +1.4 27,573 + GFF1277 0.18 -0.2 27,573 + GFF1277 0.18 -0.1 27,574 - GFF1277 0.19 -1.9 27,825 + GFF1277 0.72 +0.1 27,825 + GFF1277 0.72 -0.1 27,825 + GFF1277 0.72 -0.8 27,825 + GFF1277 0.72 -1.2 27,825 + GFF1277 0.72 -0.5 27,826 - GFF1277 0.72 -0.7 27,826 - GFF1277 0.72 -0.1 27,826 - GFF1277 0.72 -1.3 28,162 - GFF1278 0.32 -0.0 28,194 + GFF1278 0.37 -1.7 28,235 + GFF1278 0.44 +1.3 28,236 - GFF1278 0.44 +1.6 28,377 + GFF1278 0.67 -0.9 28,378 - GFF1278 0.67 -0.6 28,378 - GFF1278 0.67 +1.1
Or see this region's nucleotide sequence