Experiment: L-Aspartic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03164 and MPMX26_03165 overlap by 4 nucleotides MPMX26_03165 and MPMX26_03166 are separated by 18 nucleotides MPMX26_03166 and MPMX26_03167 are separated by 140 nucleotides
MPMX26_03164: MPMX26_03164 - Thiol:disulfide interchange protein DsbD, at 18,836 to 20,764
_03164
MPMX26_03165: MPMX26_03165 - Thiol-disulfide oxidoreductase ResA, at 20,761 to 21,606
_03165
MPMX26_03166: MPMX26_03166 - Thiol:disulfide interchange protein DsbG, at 21,625 to 22,374
_03166
MPMX26_03167: MPMX26_03167 - IS6 family transposase ISOur1, at 22,515 to 23,219
_03167
Position (kb)
21
22
23 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5 at 20.669 kb on + strand at 20.727 kb on - strand at 20.740 kb on + strand at 20.776 kb on + strand at 20.797 kb on + strand at 20.804 kb on + strand at 20.805 kb on - strand at 20.883 kb on + strand, within MPMX26_03165 at 20.883 kb on + strand, within MPMX26_03165 at 20.891 kb on - strand, within MPMX26_03165 at 20.946 kb on - strand, within MPMX26_03165 at 21.029 kb on + strand, within MPMX26_03165 at 21.039 kb on + strand, within MPMX26_03165 at 21.056 kb on + strand, within MPMX26_03165 at 21.102 kb on + strand, within MPMX26_03165 at 21.135 kb on + strand, within MPMX26_03165 at 21.266 kb on + strand, within MPMX26_03165 at 21.408 kb on - strand, within MPMX26_03165 at 21.427 kb on - strand, within MPMX26_03165 at 21.503 kb on - strand, within MPMX26_03165 at 21.515 kb on + strand, within MPMX26_03165 at 21.528 kb on - strand at 21.557 kb on + strand at 21.637 kb on + strand at 21.679 kb on + strand at 21.776 kb on + strand, within MPMX26_03166 at 21.776 kb on + strand, within MPMX26_03166 at 21.945 kb on + strand, within MPMX26_03166 at 21.945 kb on + strand, within MPMX26_03166 at 21.962 kb on - strand, within MPMX26_03166 at 21.988 kb on + strand, within MPMX26_03166 at 21.988 kb on + strand, within MPMX26_03166 at 21.996 kb on - strand, within MPMX26_03166 at 21.996 kb on - strand, within MPMX26_03166 at 22.089 kb on + strand, within MPMX26_03166 at 22.092 kb on - strand, within MPMX26_03166 at 22.092 kb on - strand, within MPMX26_03166 at 22.112 kb on + strand, within MPMX26_03166 at 22.123 kb on - strand, within MPMX26_03166 at 22.147 kb on - strand, within MPMX26_03166 at 22.319 kb on + strand at 22.330 kb on + strand at 22.338 kb on - strand at 23.267 kb on + strand at 23.267 kb on + strand at 23.267 kb on + strand at 23.301 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (N) remove 20,669 + +4.1 20,727 - +2.7 20,740 + +3.1 20,776 + +1.1 20,797 + +1.1 20,804 + +0.5 20,805 - +3.3 20,883 + MPMX26_03165 0.14 +2.1 20,883 + MPMX26_03165 0.14 +2.1 20,891 - MPMX26_03165 0.15 +4.8 20,946 - MPMX26_03165 0.22 +2.7 21,029 + MPMX26_03165 0.32 -0.8 21,039 + MPMX26_03165 0.33 +2.3 21,056 + MPMX26_03165 0.35 +1.3 21,102 + MPMX26_03165 0.40 +1.7 21,135 + MPMX26_03165 0.44 +2.3 21,266 + MPMX26_03165 0.60 +1.9 21,408 - MPMX26_03165 0.76 +0.5 21,427 - MPMX26_03165 0.79 +2.7 21,503 - MPMX26_03165 0.88 +0.1 21,515 + MPMX26_03165 0.89 -0.1 21,528 - +1.2 21,557 + +0.1 21,637 + +1.7 21,679 + +1.0 21,776 + MPMX26_03166 0.20 +1.7 21,776 + MPMX26_03166 0.20 +0.7 21,945 + MPMX26_03166 0.43 -1.0 21,945 + MPMX26_03166 0.43 +0.6 21,962 - MPMX26_03166 0.45 +1.9 21,988 + MPMX26_03166 0.48 +0.3 21,988 + MPMX26_03166 0.48 +0.0 21,996 - MPMX26_03166 0.49 -0.2 21,996 - MPMX26_03166 0.49 +0.6 22,089 + MPMX26_03166 0.62 +0.1 22,092 - MPMX26_03166 0.62 +2.7 22,092 - MPMX26_03166 0.62 +1.1 22,112 + MPMX26_03166 0.65 -0.6 22,123 - MPMX26_03166 0.66 +1.9 22,147 - MPMX26_03166 0.70 +2.3 22,319 + -1.5 22,330 + -0.1 22,338 - +1.7 23,267 + +0.7 23,267 + +0.1 23,267 + +2.3 23,301 - +2.7
Or see this region's nucleotide sequence