Experiment: L-Aspartic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03149 and MPMX26_03150 are separated by 454 nucleotides MPMX26_03150 and MPMX26_03151 are separated by 50 nucleotides MPMX26_03151 and MPMX26_03152 are separated by 161 nucleotides
MPMX26_03149: MPMX26_03149 - hypothetical protein, at 5,974 to 6,504
_03149
MPMX26_03150: MPMX26_03150 - ATP-dependent RecD-like DNA helicase, at 6,959 to 9,877
_03150
MPMX26_03151: MPMX26_03151 - hypothetical protein, at 9,928 to 10,365
_03151
MPMX26_03152: MPMX26_03152 - IS6 family transposase IS1006, at 10,527 to 11,231
_03152
Position (kb)
6
7
8
9
10 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 5.992 kb on - strand at 6.125 kb on - strand, within MPMX26_03149 at 6.508 kb on - strand at 6.992 kb on + strand at 7.020 kb on + strand at 7.027 kb on + strand at 7.052 kb on + strand at 7.052 kb on + strand at 7.168 kb on + strand at 7.168 kb on + strand at 7.214 kb on + strand at 7.276 kb on + strand, within MPMX26_03150 at 7.362 kb on + strand, within MPMX26_03150 at 7.377 kb on + strand, within MPMX26_03150 at 7.379 kb on + strand, within MPMX26_03150 at 7.400 kb on + strand, within MPMX26_03150 at 7.430 kb on + strand, within MPMX26_03150 at 7.430 kb on + strand, within MPMX26_03150 at 7.430 kb on + strand, within MPMX26_03150 at 7.469 kb on + strand, within MPMX26_03150 at 7.520 kb on + strand, within MPMX26_03150 at 7.556 kb on + strand, within MPMX26_03150 at 7.556 kb on + strand, within MPMX26_03150 at 7.585 kb on + strand, within MPMX26_03150 at 7.690 kb on + strand, within MPMX26_03150 at 7.753 kb on + strand, within MPMX26_03150 at 7.753 kb on + strand, within MPMX26_03150 at 7.781 kb on + strand, within MPMX26_03150 at 7.844 kb on + strand, within MPMX26_03150 at 8.080 kb on + strand, within MPMX26_03150 at 8.261 kb on + strand, within MPMX26_03150 at 8.514 kb on - strand, within MPMX26_03150 at 8.986 kb on + strand, within MPMX26_03150 at 8.986 kb on + strand, within MPMX26_03150 at 9.133 kb on + strand, within MPMX26_03150 at 9.215 kb on + strand, within MPMX26_03150 at 9.463 kb on + strand, within MPMX26_03150 at 9.463 kb on + strand, within MPMX26_03150 at 9.463 kb on + strand, within MPMX26_03150 at 9.463 kb on + strand, within MPMX26_03150 at 9.506 kb on + strand, within MPMX26_03150 at 9.512 kb on + strand, within MPMX26_03150 at 9.512 kb on + strand, within MPMX26_03150 at 9.512 kb on + strand, within MPMX26_03150 at 9.520 kb on + strand, within MPMX26_03150 at 9.520 kb on + strand, within MPMX26_03150 at 9.520 kb on + strand, within MPMX26_03150 at 9.520 kb on + strand, within MPMX26_03150 at 9.525 kb on + strand, within MPMX26_03150 at 9.549 kb on + strand, within MPMX26_03150 at 9.556 kb on + strand, within MPMX26_03150 at 9.682 kb on + strand at 9.682 kb on + strand at 9.682 kb on + strand at 9.682 kb on + strand at 9.694 kb on + strand at 9.701 kb on + strand at 9.742 kb on + strand at 9.764 kb on - strand at 9.970 kb on + strand at 9.970 kb on + strand at 9.970 kb on + strand at 9.970 kb on + strand at 9.970 kb on + strand at 9.970 kb on + strand at 10.001 kb on + strand, within MPMX26_03151 at 10.053 kb on + strand, within MPMX26_03151 at 10.174 kb on + strand, within MPMX26_03151 at 10.194 kb on + strand, within MPMX26_03151 at 10.194 kb on + strand, within MPMX26_03151 at 10.194 kb on + strand, within MPMX26_03151 at 10.194 kb on + strand, within MPMX26_03151 at 10.194 kb on + strand, within MPMX26_03151 at 10.286 kb on + strand, within MPMX26_03151 at 10.286 kb on - strand, within MPMX26_03151 at 10.340 kb on + strand at 10.347 kb on + strand at 10.412 kb on - strand at 10.478 kb on - strand at 10.789 kb on + strand, within MPMX26_03152 at 10.789 kb on + strand, within MPMX26_03152 at 10.794 kb on + strand, within MPMX26_03152
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (N) remove 5,992 - +1.9 6,125 - MPMX26_03149 0.28 -0.6 6,508 - -2.1 6,992 + +0.6 7,020 + +2.2 7,027 + +0.1 7,052 + +1.1 7,052 + +1.0 7,168 + +1.2 7,168 + +0.9 7,214 + -1.0 7,276 + MPMX26_03150 0.11 -0.7 7,362 + MPMX26_03150 0.14 +0.9 7,377 + MPMX26_03150 0.14 -1.5 7,379 + MPMX26_03150 0.14 +3.0 7,400 + MPMX26_03150 0.15 -0.5 7,430 + MPMX26_03150 0.16 -0.2 7,430 + MPMX26_03150 0.16 +0.8 7,430 + MPMX26_03150 0.16 -0.0 7,469 + MPMX26_03150 0.17 -0.4 7,520 + MPMX26_03150 0.19 -0.8 7,556 + MPMX26_03150 0.20 -1.9 7,556 + MPMX26_03150 0.20 +1.3 7,585 + MPMX26_03150 0.21 +2.3 7,690 + MPMX26_03150 0.25 +0.7 7,753 + MPMX26_03150 0.27 -1.3 7,753 + MPMX26_03150 0.27 -2.0 7,781 + MPMX26_03150 0.28 +1.2 7,844 + MPMX26_03150 0.30 +1.0 8,080 + MPMX26_03150 0.38 +2.3 8,261 + MPMX26_03150 0.45 +2.3 8,514 - MPMX26_03150 0.53 +4.2 8,986 + MPMX26_03150 0.69 +0.4 8,986 + MPMX26_03150 0.69 +1.5 9,133 + MPMX26_03150 0.74 +0.7 9,215 + MPMX26_03150 0.77 +0.2 9,463 + MPMX26_03150 0.86 -0.2 9,463 + MPMX26_03150 0.86 -0.5 9,463 + MPMX26_03150 0.86 -0.4 9,463 + MPMX26_03150 0.86 +0.3 9,506 + MPMX26_03150 0.87 -0.4 9,512 + MPMX26_03150 0.87 +0.7 9,512 + MPMX26_03150 0.87 -0.3 9,512 + MPMX26_03150 0.87 -1.4 9,520 + MPMX26_03150 0.88 +2.7 9,520 + MPMX26_03150 0.88 -1.2 9,520 + MPMX26_03150 0.88 +2.7 9,520 + MPMX26_03150 0.88 +1.7 9,525 + MPMX26_03150 0.88 +1.4 9,549 + MPMX26_03150 0.89 +1.9 9,556 + MPMX26_03150 0.89 -0.1 9,682 + +0.3 9,682 + -1.7 9,682 + -0.1 9,682 + +0.6 9,694 + +0.0 9,701 + +0.2 9,742 + -1.0 9,764 - +4.7 9,970 + +3.3 9,970 + -0.4 9,970 + -1.0 9,970 + +2.7 9,970 + +1.4 9,970 + -0.4 10,001 + MPMX26_03151 0.17 +2.1 10,053 + MPMX26_03151 0.29 +0.5 10,174 + MPMX26_03151 0.56 -0.2 10,194 + MPMX26_03151 0.61 +0.9 10,194 + MPMX26_03151 0.61 -0.6 10,194 + MPMX26_03151 0.61 +0.3 10,194 + MPMX26_03151 0.61 +0.7 10,194 + MPMX26_03151 0.61 +1.3 10,286 + MPMX26_03151 0.82 +0.1 10,286 - MPMX26_03151 0.82 +1.8 10,340 + -0.5 10,347 + +0.1 10,412 - +2.7 10,478 - +1.3 10,789 + MPMX26_03152 0.37 -0.9 10,789 + MPMX26_03152 0.37 -0.3 10,794 + MPMX26_03152 0.38 +1.3
Or see this region's nucleotide sequence