Experiment: L-Aspartic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01316 and MPMX26_01317 are separated by 15 nucleotides MPMX26_01317 and MPMX26_01318 are separated by 175 nucleotides MPMX26_01318 and MPMX26_01319 are separated by 54 nucleotides
MPMX26_01316: MPMX26_01316 - Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase, at 1,390,704 to 1,391,213
_01316
MPMX26_01317: MPMX26_01317 - hypothetical protein, at 1,391,229 to 1,392,002
_01317
MPMX26_01318: MPMX26_01318 - hypothetical protein, at 1,392,178 to 1,392,537
_01318
MPMX26_01319: MPMX26_01319 - Transcription-repair-coupling factor, at 1,392,592 to 1,396,095
_01319
Position (kb)
1392
1393 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1391.264 kb on + strand at 1391.280 kb on + strand at 1391.282 kb on + strand at 1391.292 kb on + strand at 1391.292 kb on + strand at 1391.306 kb on + strand at 1391.348 kb on + strand, within MPMX26_01317 at 1391.348 kb on + strand, within MPMX26_01317 at 1391.414 kb on + strand, within MPMX26_01317 at 1391.522 kb on + strand, within MPMX26_01317 at 1391.558 kb on + strand, within MPMX26_01317 at 1391.582 kb on + strand, within MPMX26_01317 at 1391.625 kb on + strand, within MPMX26_01317 at 1391.648 kb on + strand, within MPMX26_01317 at 1391.648 kb on + strand, within MPMX26_01317 at 1391.648 kb on + strand, within MPMX26_01317 at 1391.648 kb on + strand, within MPMX26_01317 at 1391.648 kb on + strand, within MPMX26_01317 at 1391.648 kb on + strand, within MPMX26_01317 at 1391.648 kb on + strand, within MPMX26_01317 at 1391.648 kb on + strand, within MPMX26_01317 at 1391.669 kb on + strand, within MPMX26_01317 at 1391.669 kb on + strand, within MPMX26_01317 at 1391.669 kb on + strand, within MPMX26_01317 at 1391.669 kb on + strand, within MPMX26_01317 at 1391.669 kb on + strand, within MPMX26_01317 at 1391.672 kb on + strand, within MPMX26_01317 at 1391.672 kb on + strand, within MPMX26_01317 at 1391.750 kb on + strand, within MPMX26_01317 at 1391.834 kb on + strand, within MPMX26_01317 at 1391.949 kb on + strand at 1392.201 kb on + strand at 1392.214 kb on + strand, within MPMX26_01318 at 1392.214 kb on + strand, within MPMX26_01318 at 1392.237 kb on + strand, within MPMX26_01318 at 1392.312 kb on + strand, within MPMX26_01318 at 1392.793 kb on + strand at 1392.804 kb on + strand at 1392.822 kb on + strand at 1392.822 kb on + strand at 1392.942 kb on + strand at 1393.068 kb on + strand, within MPMX26_01319 at 1393.099 kb on + strand, within MPMX26_01319 at 1393.108 kb on + strand, within MPMX26_01319 at 1393.108 kb on + strand, within MPMX26_01319 at 1393.114 kb on + strand, within MPMX26_01319 at 1393.128 kb on + strand, within MPMX26_01319 at 1393.143 kb on + strand, within MPMX26_01319 at 1393.156 kb on + strand, within MPMX26_01319 at 1393.161 kb on + strand, within MPMX26_01319 at 1393.165 kb on + strand, within MPMX26_01319 at 1393.165 kb on + strand, within MPMX26_01319 at 1393.257 kb on + strand, within MPMX26_01319 at 1393.317 kb on + strand, within MPMX26_01319 at 1393.317 kb on + strand, within MPMX26_01319 at 1393.317 kb on + strand, within MPMX26_01319 at 1393.317 kb on + strand, within MPMX26_01319 at 1393.324 kb on + strand, within MPMX26_01319 at 1393.324 kb on + strand, within MPMX26_01319
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (N) remove 1,391,264 + +0.0 1,391,280 + +1.0 1,391,282 + -0.0 1,391,292 + -0.1 1,391,292 + -0.6 1,391,306 + -0.1 1,391,348 + MPMX26_01317 0.15 -0.4 1,391,348 + MPMX26_01317 0.15 -0.4 1,391,414 + MPMX26_01317 0.24 +0.9 1,391,522 + MPMX26_01317 0.38 +0.7 1,391,558 + MPMX26_01317 0.43 +0.3 1,391,582 + MPMX26_01317 0.46 -1.0 1,391,625 + MPMX26_01317 0.51 +0.3 1,391,648 + MPMX26_01317 0.54 -0.4 1,391,648 + MPMX26_01317 0.54 -0.2 1,391,648 + MPMX26_01317 0.54 +0.8 1,391,648 + MPMX26_01317 0.54 +0.4 1,391,648 + MPMX26_01317 0.54 -0.2 1,391,648 + MPMX26_01317 0.54 +0.6 1,391,648 + MPMX26_01317 0.54 +0.6 1,391,648 + MPMX26_01317 0.54 +1.2 1,391,669 + MPMX26_01317 0.57 +0.1 1,391,669 + MPMX26_01317 0.57 -1.3 1,391,669 + MPMX26_01317 0.57 +0.4 1,391,669 + MPMX26_01317 0.57 +1.2 1,391,669 + MPMX26_01317 0.57 -0.1 1,391,672 + MPMX26_01317 0.57 -0.4 1,391,672 + MPMX26_01317 0.57 -0.8 1,391,750 + MPMX26_01317 0.67 +1.7 1,391,834 + MPMX26_01317 0.78 -0.2 1,391,949 + +1.2 1,392,201 + -0.5 1,392,214 + MPMX26_01318 0.10 +0.0 1,392,214 + MPMX26_01318 0.10 +2.0 1,392,237 + MPMX26_01318 0.16 -0.1 1,392,312 + MPMX26_01318 0.37 +0.6 1,392,793 + -1.4 1,392,804 + -0.2 1,392,822 + -1.8 1,392,822 + +0.2 1,392,942 + -0.9 1,393,068 + MPMX26_01319 0.14 -1.0 1,393,099 + MPMX26_01319 0.14 +0.2 1,393,108 + MPMX26_01319 0.15 -2.2 1,393,108 + MPMX26_01319 0.15 -0.8 1,393,114 + MPMX26_01319 0.15 -0.0 1,393,128 + MPMX26_01319 0.15 -0.9 1,393,143 + MPMX26_01319 0.16 -1.0 1,393,156 + MPMX26_01319 0.16 -0.7 1,393,161 + MPMX26_01319 0.16 +0.3 1,393,165 + MPMX26_01319 0.16 -0.8 1,393,165 + MPMX26_01319 0.16 -2.7 1,393,257 + MPMX26_01319 0.19 -0.8 1,393,317 + MPMX26_01319 0.21 +0.1 1,393,317 + MPMX26_01319 0.21 +0.6 1,393,317 + MPMX26_01319 0.21 -0.3 1,393,317 + MPMX26_01319 0.21 -0.9 1,393,324 + MPMX26_01319 0.21 -0.8 1,393,324 + MPMX26_01319 0.21 -1.6
Or see this region's nucleotide sequence