Experiment: L-Aspartic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01225 and MPMX26_01226 are separated by 14 nucleotides MPMX26_01226 and MPMX26_01227 overlap by 11 nucleotides MPMX26_01227 and MPMX26_01228 overlap by 4 nucleotides MPMX26_01228 and MPMX26_01229 are separated by 22 nucleotides
MPMX26_01225: MPMX26_01225 - hypothetical protein, at 1,299,345 to 1,299,953
_01225
MPMX26_01226: MPMX26_01226 - hypothetical protein, at 1,299,968 to 1,300,531
_01226
MPMX26_01227: MPMX26_01227 - hypothetical protein, at 1,300,521 to 1,300,907
_01227
MPMX26_01228: MPMX26_01228 - Type II secretion system protein J, at 1,300,904 to 1,301,539
_01228
MPMX26_01229: MPMX26_01229 - Type II secretion system protein K, at 1,301,562 to 1,302,506
_01229
Position (kb)
1300
1301 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1299.545 kb on - strand, within MPMX26_01225 at 1299.607 kb on + strand, within MPMX26_01225 at 1299.612 kb on + strand, within MPMX26_01225 at 1299.612 kb on + strand, within MPMX26_01225 at 1299.713 kb on + strand, within MPMX26_01225 at 1299.779 kb on + strand, within MPMX26_01225 at 1299.779 kb on + strand, within MPMX26_01225 at 1299.780 kb on + strand, within MPMX26_01225 at 1299.781 kb on + strand, within MPMX26_01225 at 1299.789 kb on + strand, within MPMX26_01225 at 1299.789 kb on + strand, within MPMX26_01225 at 1299.789 kb on + strand, within MPMX26_01225 at 1299.817 kb on + strand, within MPMX26_01225 at 1299.863 kb on + strand, within MPMX26_01225 at 1299.868 kb on + strand, within MPMX26_01225 at 1299.886 kb on + strand, within MPMX26_01225 at 1299.886 kb on + strand, within MPMX26_01225 at 1299.896 kb on + strand at 1299.896 kb on + strand at 1299.896 kb on + strand at 1299.901 kb on + strand at 1299.911 kb on + strand at 1299.911 kb on + strand at 1299.911 kb on + strand at 1299.911 kb on + strand at 1299.911 kb on + strand at 1299.932 kb on + strand at 1299.932 kb on + strand at 1299.942 kb on + strand at 1299.965 kb on + strand at 1299.998 kb on + strand at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.077 kb on + strand, within MPMX26_01226 at 1300.082 kb on + strand, within MPMX26_01226 at 1300.087 kb on + strand, within MPMX26_01226 at 1300.087 kb on + strand, within MPMX26_01226 at 1300.087 kb on + strand, within MPMX26_01226 at 1300.087 kb on + strand, within MPMX26_01226 at 1300.087 kb on + strand, within MPMX26_01226 at 1300.087 kb on + strand, within MPMX26_01226 at 1300.087 kb on + strand, within MPMX26_01226 at 1300.087 kb on + strand, within MPMX26_01226 at 1300.087 kb on + strand, within MPMX26_01226 at 1300.087 kb on + strand, within MPMX26_01226 at 1300.087 kb on + strand, within MPMX26_01226 at 1300.087 kb on + strand, within MPMX26_01226 at 1300.087 kb on + strand, within MPMX26_01226 at 1300.092 kb on + strand, within MPMX26_01226 at 1300.102 kb on + strand, within MPMX26_01226 at 1300.102 kb on + strand, within MPMX26_01226 at 1300.159 kb on + strand, within MPMX26_01226 at 1300.163 kb on + strand, within MPMX26_01226 at 1300.163 kb on + strand, within MPMX26_01226 at 1300.175 kb on + strand, within MPMX26_01226 at 1300.180 kb on + strand, within MPMX26_01226 at 1300.186 kb on + strand, within MPMX26_01226 at 1300.390 kb on + strand, within MPMX26_01226 at 1300.417 kb on + strand, within MPMX26_01226 at 1300.438 kb on + strand, within MPMX26_01226 at 1300.700 kb on + strand, within MPMX26_01227 at 1300.709 kb on + strand, within MPMX26_01227 at 1300.743 kb on + strand, within MPMX26_01227 at 1300.823 kb on + strand, within MPMX26_01227 at 1300.823 kb on + strand, within MPMX26_01227 at 1300.831 kb on - strand, within MPMX26_01227 at 1300.833 kb on + strand, within MPMX26_01227 at 1300.930 kb on + strand at 1300.978 kb on + strand, within MPMX26_01228
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (N) remove 1,299,545 - MPMX26_01225 0.33 +1.0 1,299,607 + MPMX26_01225 0.43 -0.6 1,299,612 + MPMX26_01225 0.44 -0.1 1,299,612 + MPMX26_01225 0.44 -1.7 1,299,713 + MPMX26_01225 0.60 +0.3 1,299,779 + MPMX26_01225 0.71 -0.2 1,299,779 + MPMX26_01225 0.71 -1.4 1,299,780 + MPMX26_01225 0.71 -0.6 1,299,781 + MPMX26_01225 0.72 +0.2 1,299,789 + MPMX26_01225 0.73 +0.5 1,299,789 + MPMX26_01225 0.73 -0.2 1,299,789 + MPMX26_01225 0.73 +0.2 1,299,817 + MPMX26_01225 0.78 +1.7 1,299,863 + MPMX26_01225 0.85 -0.1 1,299,868 + MPMX26_01225 0.86 -1.0 1,299,886 + MPMX26_01225 0.89 -0.3 1,299,886 + MPMX26_01225 0.89 +0.2 1,299,896 + +0.7 1,299,896 + +0.2 1,299,896 + -1.9 1,299,901 + -0.5 1,299,911 + +0.0 1,299,911 + +0.1 1,299,911 + +0.1 1,299,911 + -0.8 1,299,911 + -0.4 1,299,932 + +1.2 1,299,932 + +0.7 1,299,942 + -0.3 1,299,965 + +0.3 1,299,998 + +0.7 1,300,077 + MPMX26_01226 0.19 -0.8 1,300,077 + MPMX26_01226 0.19 +0.6 1,300,077 + MPMX26_01226 0.19 +0.8 1,300,077 + MPMX26_01226 0.19 +0.2 1,300,077 + MPMX26_01226 0.19 -1.1 1,300,077 + MPMX26_01226 0.19 +1.1 1,300,077 + MPMX26_01226 0.19 -2.3 1,300,077 + MPMX26_01226 0.19 +3.0 1,300,077 + MPMX26_01226 0.19 -0.0 1,300,077 + MPMX26_01226 0.19 -1.0 1,300,077 + MPMX26_01226 0.19 +0.8 1,300,077 + MPMX26_01226 0.19 +1.4 1,300,077 + MPMX26_01226 0.19 -1.0 1,300,077 + MPMX26_01226 0.19 +0.5 1,300,077 + MPMX26_01226 0.19 +0.2 1,300,077 + MPMX26_01226 0.19 +0.0 1,300,077 + MPMX26_01226 0.19 +0.1 1,300,077 + MPMX26_01226 0.19 +0.4 1,300,077 + MPMX26_01226 0.19 -1.2 1,300,082 + MPMX26_01226 0.20 +0.1 1,300,087 + MPMX26_01226 0.21 -1.9 1,300,087 + MPMX26_01226 0.21 -2.3 1,300,087 + MPMX26_01226 0.21 -1.4 1,300,087 + MPMX26_01226 0.21 -0.5 1,300,087 + MPMX26_01226 0.21 -0.8 1,300,087 + MPMX26_01226 0.21 +0.2 1,300,087 + MPMX26_01226 0.21 -0.3 1,300,087 + MPMX26_01226 0.21 +1.1 1,300,087 + MPMX26_01226 0.21 +0.0 1,300,087 + MPMX26_01226 0.21 +1.0 1,300,087 + MPMX26_01226 0.21 +0.5 1,300,087 + MPMX26_01226 0.21 -0.1 1,300,087 + MPMX26_01226 0.21 -0.3 1,300,092 + MPMX26_01226 0.22 -0.3 1,300,102 + MPMX26_01226 0.24 +0.1 1,300,102 + MPMX26_01226 0.24 +1.4 1,300,159 + MPMX26_01226 0.34 -0.6 1,300,163 + MPMX26_01226 0.35 +0.1 1,300,163 + MPMX26_01226 0.35 -0.0 1,300,175 + MPMX26_01226 0.37 -0.3 1,300,180 + MPMX26_01226 0.38 +1.5 1,300,186 + MPMX26_01226 0.39 +0.3 1,300,390 + MPMX26_01226 0.75 -0.4 1,300,417 + MPMX26_01226 0.80 +0.5 1,300,438 + MPMX26_01226 0.83 +1.4 1,300,700 + MPMX26_01227 0.46 +2.3 1,300,709 + MPMX26_01227 0.49 +0.7 1,300,743 + MPMX26_01227 0.57 -1.0 1,300,823 + MPMX26_01227 0.78 +1.2 1,300,823 + MPMX26_01227 0.78 -0.0 1,300,831 - MPMX26_01227 0.80 +0.7 1,300,833 + MPMX26_01227 0.81 +1.0 1,300,930 + +1.4 1,300,978 + MPMX26_01228 0.12 +1.9
Or see this region's nucleotide sequence