Experiment: L-Aspartic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01178 and MPMX26_01179 are separated by 247 nucleotides MPMX26_01179 and MPMX26_01180 are separated by 86 nucleotides MPMX26_01180 and MPMX26_01181 are separated by 313 nucleotides
MPMX26_01178: MPMX26_01178 - Acyl-CoA dehydrogenase, at 1,245,442 to 1,246,578
_01178
MPMX26_01179: MPMX26_01179 - Acetyl-coenzyme A synthetase, at 1,246,826 to 1,248,478
_01179
MPMX26_01180: MPMX26_01180 - hypothetical protein, at 1,248,565 to 1,249,065
_01180
MPMX26_01181: MPMX26_01181 - Molybdopterin-synthase adenylyltransferase, at 1,249,379 to 1,250,161
_01181
Position (kb) 1246
1247
1248
1249 Strain fitness (log2 ratio) -1
0
1
2 at 1246.224 kb on - strand, within MPMX26_01178 at 1246.607 kb on + strand at 1248.586 kb on - strand at 1248.588 kb on - strand at 1248.588 kb on - strand at 1248.598 kb on - strand at 1248.598 kb on - strand at 1248.598 kb on - strand at 1248.598 kb on - strand at 1248.613 kb on - strand at 1248.614 kb on - strand at 1248.651 kb on - strand, within MPMX26_01180 at 1248.658 kb on - strand, within MPMX26_01180 at 1248.676 kb on - strand, within MPMX26_01180 at 1248.676 kb on - strand, within MPMX26_01180 at 1248.793 kb on - strand, within MPMX26_01180 at 1248.814 kb on - strand, within MPMX26_01180 at 1248.816 kb on - strand, within MPMX26_01180 at 1249.003 kb on - strand, within MPMX26_01180 at 1249.424 kb on + strand at 1249.424 kb on + strand at 1249.474 kb on + strand, within MPMX26_01181
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (N) remove 1,246,224 - MPMX26_01178 0.69 +1.4 1,246,607 + +2.1 1,248,586 - -0.1 1,248,588 - +0.0 1,248,588 - +1.5 1,248,598 - +0.4 1,248,598 - +1.2 1,248,598 - -0.1 1,248,598 - +0.3 1,248,613 - -0.4 1,248,614 - +1.1 1,248,651 - MPMX26_01180 0.17 -1.0 1,248,658 - MPMX26_01180 0.19 +0.6 1,248,676 - MPMX26_01180 0.22 -1.1 1,248,676 - MPMX26_01180 0.22 -0.5 1,248,793 - MPMX26_01180 0.46 -0.1 1,248,814 - MPMX26_01180 0.50 +0.6 1,248,816 - MPMX26_01180 0.50 +0.4 1,249,003 - MPMX26_01180 0.87 +1.1 1,249,424 + +0.3 1,249,424 + -0.6 1,249,474 + MPMX26_01181 0.12 +0.5
Or see this region's nucleotide sequence