Experiment: L-Aspartic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00575 and MPMX26_00576 overlap by 11 nucleotides MPMX26_00576 and MPMX26_00577 are separated by 9 nucleotides MPMX26_00577 and MPMX26_00578 are separated by 103 nucleotides
MPMX26_00575: MPMX26_00575 - hypothetical protein, at 608,519 to 611,368
_00575
MPMX26_00576: MPMX26_00576 - Small-conductance mechanosensitive channel, at 611,358 to 612,281
_00576
MPMX26_00577: MPMX26_00577 - hypothetical protein, at 612,291 to 613,112
_00577
MPMX26_00578: MPMX26_00578 - Type II secretion system protein E, at 613,216 to 614,703
_00578
Position (kb) 612
613
614 Strain fitness (log2 ratio) -1
0
1
2
3 at 611.573 kb on - strand, within MPMX26_00576 at 611.646 kb on - strand, within MPMX26_00576 at 611.885 kb on - strand, within MPMX26_00576 at 611.915 kb on - strand, within MPMX26_00576 at 611.925 kb on - strand, within MPMX26_00576 at 612.101 kb on - strand, within MPMX26_00576 at 612.359 kb on - strand at 612.406 kb on + strand, within MPMX26_00577 at 612.414 kb on - strand, within MPMX26_00577 at 612.596 kb on - strand, within MPMX26_00577 at 612.596 kb on - strand, within MPMX26_00577 at 612.611 kb on - strand, within MPMX26_00577 at 612.627 kb on - strand, within MPMX26_00577 at 612.767 kb on - strand, within MPMX26_00577 at 612.806 kb on - strand, within MPMX26_00577 at 613.296 kb on + strand at 613.364 kb on + strand at 613.380 kb on + strand, within MPMX26_00578 at 613.380 kb on + strand, within MPMX26_00578 at 613.380 kb on + strand, within MPMX26_00578 at 613.390 kb on + strand, within MPMX26_00578 at 613.419 kb on + strand, within MPMX26_00578 at 613.575 kb on + strand, within MPMX26_00578 at 613.752 kb on + strand, within MPMX26_00578
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (N) remove 611,573 - MPMX26_00576 0.23 +1.0 611,646 - MPMX26_00576 0.31 +1.4 611,885 - MPMX26_00576 0.57 +1.5 611,915 - MPMX26_00576 0.60 -0.9 611,925 - MPMX26_00576 0.61 -0.9 612,101 - MPMX26_00576 0.80 +1.1 612,359 - -0.7 612,406 + MPMX26_00577 0.14 +3.2 612,414 - MPMX26_00577 0.15 +0.7 612,596 - MPMX26_00577 0.37 +1.3 612,596 - MPMX26_00577 0.37 +1.7 612,611 - MPMX26_00577 0.39 -1.1 612,627 - MPMX26_00577 0.41 -0.0 612,767 - MPMX26_00577 0.58 +0.1 612,806 - MPMX26_00577 0.63 +1.2 613,296 + +2.0 613,364 + -0.4 613,380 + MPMX26_00578 0.11 +1.3 613,380 + MPMX26_00578 0.11 -0.4 613,380 + MPMX26_00578 0.11 +0.6 613,390 + MPMX26_00578 0.12 -1.0 613,419 + MPMX26_00578 0.14 +0.4 613,575 + MPMX26_00578 0.24 +1.5 613,752 + MPMX26_00578 0.36 +0.3
Or see this region's nucleotide sequence