Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00076

Experiment: L-Aspartic Acid (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00075 and MPMX26_00076 are separated by 99 nucleotidesMPMX26_00076 and MPMX26_00077 are separated by 68 nucleotidesMPMX26_00077 and MPMX26_00078 are separated by 21 nucleotides MPMX26_00075: MPMX26_00075 - hypothetical protein, at 81,064 to 82,008 _00075 MPMX26_00076: MPMX26_00076 - hypothetical protein, at 82,108 to 82,761 _00076 MPMX26_00077: MPMX26_00077 - Cell division protein FtsN, at 82,830 to 83,453 _00077 MPMX26_00078: MPMX26_00078 - Arginine--tRNA ligase, at 83,475 to 85,265 _00078 Position (kb) 82 83Strain fitness (log2 ratio) -1 0 1 2 3at 81.160 kb on + strand, within MPMX26_00075at 81.205 kb on + strand, within MPMX26_00075at 81.364 kb on - strand, within MPMX26_00075at 81.379 kb on + strand, within MPMX26_00075at 81.444 kb on - strand, within MPMX26_00075at 81.465 kb on + strand, within MPMX26_00075at 81.565 kb on + strand, within MPMX26_00075at 81.939 kb on + strandat 81.939 kb on + strandat 81.955 kb on + strandat 82.114 kb on + strandat 82.129 kb on + strandat 82.254 kb on + strand, within MPMX26_00076at 82.261 kb on + strand, within MPMX26_00076at 82.283 kb on + strand, within MPMX26_00076at 82.299 kb on + strand, within MPMX26_00076at 82.299 kb on + strand, within MPMX26_00076at 82.299 kb on + strand, within MPMX26_00076at 82.375 kb on - strand, within MPMX26_00076at 82.581 kb on + strand, within MPMX26_00076at 82.587 kb on + strand, within MPMX26_00076at 82.641 kb on + strand, within MPMX26_00076at 82.654 kb on + strand, within MPMX26_00076at 82.725 kb on + strandat 82.733 kb on - strandat 82.749 kb on + strandat 82.749 kb on + strandat 82.835 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (N)
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81,160 + MPMX26_00075 0.10 +3.2
81,205 + MPMX26_00075 0.15 +0.1
81,364 - MPMX26_00075 0.32 +2.1
81,379 + MPMX26_00075 0.33 +1.2
81,444 - MPMX26_00075 0.40 +0.1
81,465 + MPMX26_00075 0.42 -0.6
81,565 + MPMX26_00075 0.53 +0.1
81,939 + +0.1
81,939 + -0.3
81,955 + +2.5
82,114 + -0.1
82,129 + +0.7
82,254 + MPMX26_00076 0.22 +1.7
82,261 + MPMX26_00076 0.23 -0.7
82,283 + MPMX26_00076 0.27 +0.4
82,299 + MPMX26_00076 0.29 +0.5
82,299 + MPMX26_00076 0.29 +1.1
82,299 + MPMX26_00076 0.29 +0.1
82,375 - MPMX26_00076 0.41 -0.3
82,581 + MPMX26_00076 0.72 +1.1
82,587 + MPMX26_00076 0.73 +1.9
82,641 + MPMX26_00076 0.81 -0.7
82,654 + MPMX26_00076 0.83 -1.0
82,725 + -0.8
82,733 - -1.3
82,749 + -1.1
82,749 + +0.4
82,835 - -0.8

Or see this region's nucleotide sequence