Experiment: supernatant control, M9 with 0.1X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt COO64_RS14895 and COO64_RS14900 are separated by 314 nucleotides COO64_RS14900 and COO64_RS14905 are separated by 3 nucleotides COO64_RS14905 and COO64_RS14910 are separated by 116 nucleotides
COO64_RS14895: COO64_RS14895 - cystathionine beta-synthase, at 539,067 to 540,443
_RS14895
COO64_RS14900: COO64_RS14900 - SDR family oxidoreductase, at 540,758 to 541,801
_RS14900
COO64_RS14905: COO64_RS14905 - ester cyclase, at 541,805 to 542,224
_RS14905
COO64_RS14910: COO64_RS14910 - LysR family transcriptional regulator, at 542,341 to 543,246
_RS14910
Position (kb) 540
541
542 Strain fitness (log2 ratio) -2
-1
0
1
2 at 539.775 kb on - strand, within COO64_RS14895 at 539.798 kb on - strand, within COO64_RS14895 at 539.915 kb on + strand, within COO64_RS14895 at 539.915 kb on + strand, within COO64_RS14895 at 539.916 kb on - strand, within COO64_RS14895 at 539.916 kb on - strand, within COO64_RS14895 at 539.916 kb on - strand, within COO64_RS14895 at 540.058 kb on + strand, within COO64_RS14895 at 540.058 kb on + strand, within COO64_RS14895 at 540.058 kb on + strand, within COO64_RS14895 at 540.061 kb on + strand, within COO64_RS14895 at 540.062 kb on - strand, within COO64_RS14895 at 540.399 kb on - strand at 540.537 kb on + strand at 540.537 kb on + strand at 540.537 kb on + strand at 540.538 kb on - strand at 540.538 kb on - strand at 540.538 kb on - strand at 540.538 kb on - strand at 540.538 kb on - strand at 540.538 kb on - strand at 540.538 kb on - strand at 540.538 kb on - strand at 540.538 kb on - strand at 540.538 kb on - strand at 540.614 kb on + strand at 540.615 kb on - strand at 540.615 kb on - strand at 540.615 kb on - strand at 540.759 kb on + strand at 540.760 kb on - strand at 540.760 kb on - strand at 540.822 kb on - strand at 540.901 kb on + strand, within COO64_RS14900 at 540.923 kb on + strand, within COO64_RS14900 at 540.976 kb on - strand, within COO64_RS14900 at 541.002 kb on + strand, within COO64_RS14900 at 541.002 kb on + strand, within COO64_RS14900 at 541.002 kb on + strand, within COO64_RS14900 at 541.002 kb on + strand, within COO64_RS14900 at 541.004 kb on + strand, within COO64_RS14900 at 541.005 kb on - strand, within COO64_RS14900 at 541.005 kb on - strand, within COO64_RS14900 at 541.068 kb on - strand, within COO64_RS14900 at 541.107 kb on + strand, within COO64_RS14900 at 541.107 kb on + strand, within COO64_RS14900 at 541.107 kb on + strand, within COO64_RS14900 at 541.108 kb on - strand, within COO64_RS14900 at 541.142 kb on + strand, within COO64_RS14900 at 541.142 kb on + strand, within COO64_RS14900 at 541.142 kb on + strand, within COO64_RS14900 at 541.142 kb on + strand, within COO64_RS14900 at 541.142 kb on + strand, within COO64_RS14900 at 541.142 kb on + strand, within COO64_RS14900 at 541.142 kb on + strand, within COO64_RS14900 at 541.142 kb on + strand, within COO64_RS14900 at 541.143 kb on - strand, within COO64_RS14900 at 541.143 kb on - strand, within COO64_RS14900 at 541.143 kb on - strand, within COO64_RS14900 at 541.143 kb on - strand, within COO64_RS14900 at 541.144 kb on + strand, within COO64_RS14900 at 541.144 kb on + strand, within COO64_RS14900 at 541.144 kb on + strand, within COO64_RS14900 at 541.186 kb on + strand, within COO64_RS14900 at 541.256 kb on + strand, within COO64_RS14900 at 541.256 kb on + strand, within COO64_RS14900 at 541.256 kb on + strand, within COO64_RS14900 at 541.256 kb on + strand, within COO64_RS14900 at 541.257 kb on - strand, within COO64_RS14900 at 541.352 kb on + strand, within COO64_RS14900 at 541.365 kb on + strand, within COO64_RS14900 at 541.365 kb on + strand, within COO64_RS14900 at 541.368 kb on + strand, within COO64_RS14900 at 541.368 kb on + strand, within COO64_RS14900 at 541.368 kb on + strand, within COO64_RS14900 at 541.368 kb on + strand, within COO64_RS14900 at 541.368 kb on + strand, within COO64_RS14900 at 541.369 kb on - strand, within COO64_RS14900 at 541.369 kb on - strand, within COO64_RS14900 at 541.369 kb on - strand, within COO64_RS14900 at 541.369 kb on - strand, within COO64_RS14900 at 541.369 kb on - strand, within COO64_RS14900 at 541.453 kb on + strand, within COO64_RS14900 at 541.453 kb on + strand, within COO64_RS14900 at 541.453 kb on + strand, within COO64_RS14900 at 541.453 kb on + strand, within COO64_RS14900 at 541.453 kb on + strand, within COO64_RS14900 at 541.454 kb on - strand, within COO64_RS14900 at 541.454 kb on - strand, within COO64_RS14900 at 541.454 kb on - strand, within COO64_RS14900 at 541.454 kb on - strand, within COO64_RS14900 at 541.454 kb on - strand, within COO64_RS14900 at 541.454 kb on - strand, within COO64_RS14900 at 541.454 kb on - strand, within COO64_RS14900 at 541.454 kb on - strand, within COO64_RS14900 at 541.454 kb on - strand, within COO64_RS14900 at 541.469 kb on + strand, within COO64_RS14900 at 541.483 kb on - strand, within COO64_RS14900 at 541.483 kb on - strand, within COO64_RS14900 at 541.557 kb on + strand, within COO64_RS14900 at 541.557 kb on + strand, within COO64_RS14900 at 541.557 kb on + strand, within COO64_RS14900 at 541.557 kb on + strand, within COO64_RS14900 at 541.557 kb on + strand, within COO64_RS14900 at 541.557 kb on + strand, within COO64_RS14900 at 541.558 kb on - strand, within COO64_RS14900 at 541.558 kb on - strand, within COO64_RS14900 at 541.558 kb on - strand, within COO64_RS14900 at 541.558 kb on - strand, within COO64_RS14900 at 541.558 kb on - strand, within COO64_RS14900 at 541.558 kb on - strand, within COO64_RS14900 at 541.561 kb on + strand, within COO64_RS14900 at 541.561 kb on + strand, within COO64_RS14900 at 541.582 kb on + strand, within COO64_RS14900 at 541.582 kb on + strand, within COO64_RS14900 at 541.582 kb on + strand, within COO64_RS14900 at 541.583 kb on - strand, within COO64_RS14900 at 541.725 kb on + strand at 541.905 kb on + strand, within COO64_RS14905 at 541.955 kb on + strand, within COO64_RS14905 at 541.985 kb on + strand, within COO64_RS14905 at 541.986 kb on - strand, within COO64_RS14905 at 542.124 kb on + strand, within COO64_RS14905 at 542.162 kb on + strand, within COO64_RS14905 at 542.162 kb on + strand, within COO64_RS14905 at 542.162 kb on + strand, within COO64_RS14905 at 542.163 kb on - strand, within COO64_RS14905 at 542.163 kb on - strand, within COO64_RS14905 at 542.163 kb on - strand, within COO64_RS14905 at 542.218 kb on + strand at 542.219 kb on - strand at 542.259 kb on + strand at 542.259 kb on + strand at 542.259 kb on + strand at 542.259 kb on + strand at 542.259 kb on + strand at 542.259 kb on + strand at 542.260 kb on - strand at 542.260 kb on - strand at 542.260 kb on - strand at 542.261 kb on + strand at 542.261 kb on + strand at 542.261 kb on + strand at 542.261 kb on + strand at 542.262 kb on - strand at 542.262 kb on - strand at 542.262 kb on - strand at 542.262 kb on - strand at 542.262 kb on - strand at 542.262 kb on - strand at 542.300 kb on + strand at 542.340 kb on + strand at 542.341 kb on - strand at 542.378 kb on + strand at 542.442 kb on + strand, within COO64_RS14910 at 542.667 kb on + strand, within COO64_RS14910 at 542.774 kb on + strand, within COO64_RS14910
Per-strain Table
Position Strand Gene LocusTag Fraction supernatant control, M9 with 0.1X LB remove 539,775 - COO64_RS14895 0.51 +0.4 539,798 - COO64_RS14895 0.53 +0.2 539,915 + COO64_RS14895 0.62 +0.1 539,915 + COO64_RS14895 0.62 -0.8 539,916 - COO64_RS14895 0.62 +1.1 539,916 - COO64_RS14895 0.62 -0.6 539,916 - COO64_RS14895 0.62 +0.2 540,058 + COO64_RS14895 0.72 -1.0 540,058 + COO64_RS14895 0.72 -0.5 540,058 + COO64_RS14895 0.72 +0.7 540,061 + COO64_RS14895 0.72 -0.2 540,062 - COO64_RS14895 0.72 +0.1 540,399 - +0.0 540,537 + +1.5 540,537 + -0.6 540,537 + -0.2 540,538 - -0.5 540,538 - +1.5 540,538 - -0.9 540,538 - +0.5 540,538 - -0.0 540,538 - -0.3 540,538 - +0.3 540,538 - +0.3 540,538 - +1.5 540,538 - +0.1 540,614 + -0.0 540,615 - -0.7 540,615 - +0.4 540,615 - +0.5 540,759 + +0.9 540,760 - +0.6 540,760 - -0.6 540,822 - -0.8 540,901 + COO64_RS14900 0.14 -0.1 540,923 + COO64_RS14900 0.16 +0.5 540,976 - COO64_RS14900 0.21 +0.9 541,002 + COO64_RS14900 0.23 -0.2 541,002 + COO64_RS14900 0.23 +0.4 541,002 + COO64_RS14900 0.23 -0.1 541,002 + COO64_RS14900 0.23 -0.5 541,004 + COO64_RS14900 0.24 -0.4 541,005 - COO64_RS14900 0.24 +0.3 541,005 - COO64_RS14900 0.24 +0.1 541,068 - COO64_RS14900 0.30 -0.0 541,107 + COO64_RS14900 0.33 -0.9 541,107 + COO64_RS14900 0.33 +0.5 541,107 + COO64_RS14900 0.33 +0.3 541,108 - COO64_RS14900 0.34 -1.9 541,142 + COO64_RS14900 0.37 -0.4 541,142 + COO64_RS14900 0.37 -0.2 541,142 + COO64_RS14900 0.37 +0.1 541,142 + COO64_RS14900 0.37 -0.7 541,142 + COO64_RS14900 0.37 -0.6 541,142 + COO64_RS14900 0.37 -2.5 541,142 + COO64_RS14900 0.37 +0.6 541,142 + COO64_RS14900 0.37 -0.2 541,143 - COO64_RS14900 0.37 +0.6 541,143 - COO64_RS14900 0.37 +0.1 541,143 - COO64_RS14900 0.37 -0.1 541,143 - COO64_RS14900 0.37 -0.0 541,144 + COO64_RS14900 0.37 -0.0 541,144 + COO64_RS14900 0.37 +0.1 541,144 + COO64_RS14900 0.37 +0.1 541,186 + COO64_RS14900 0.41 +1.2 541,256 + COO64_RS14900 0.48 -0.8 541,256 + COO64_RS14900 0.48 +0.5 541,256 + COO64_RS14900 0.48 +1.1 541,256 + COO64_RS14900 0.48 -1.6 541,257 - COO64_RS14900 0.48 -0.1 541,352 + COO64_RS14900 0.57 -0.4 541,365 + COO64_RS14900 0.58 -1.7 541,365 + COO64_RS14900 0.58 +0.1 541,368 + COO64_RS14900 0.58 -1.4 541,368 + COO64_RS14900 0.58 -0.8 541,368 + COO64_RS14900 0.58 -1.1 541,368 + COO64_RS14900 0.58 -0.4 541,368 + COO64_RS14900 0.58 +0.0 541,369 - COO64_RS14900 0.59 +1.5 541,369 - COO64_RS14900 0.59 +0.3 541,369 - COO64_RS14900 0.59 +0.3 541,369 - COO64_RS14900 0.59 +0.5 541,369 - COO64_RS14900 0.59 +0.4 541,453 + COO64_RS14900 0.67 -1.4 541,453 + COO64_RS14900 0.67 -0.7 541,453 + COO64_RS14900 0.67 -0.6 541,453 + COO64_RS14900 0.67 -0.9 541,453 + COO64_RS14900 0.67 +0.8 541,454 - COO64_RS14900 0.67 -0.7 541,454 - COO64_RS14900 0.67 -0.3 541,454 - COO64_RS14900 0.67 -1.1 541,454 - COO64_RS14900 0.67 +0.5 541,454 - COO64_RS14900 0.67 -0.7 541,454 - COO64_RS14900 0.67 -0.3 541,454 - COO64_RS14900 0.67 -0.6 541,454 - COO64_RS14900 0.67 -0.0 541,454 - COO64_RS14900 0.67 +1.2 541,469 + COO64_RS14900 0.68 +0.3 541,483 - COO64_RS14900 0.69 +0.9 541,483 - COO64_RS14900 0.69 +1.0 541,557 + COO64_RS14900 0.77 +0.6 541,557 + COO64_RS14900 0.77 -0.4 541,557 + COO64_RS14900 0.77 +0.0 541,557 + COO64_RS14900 0.77 +0.5 541,557 + COO64_RS14900 0.77 +0.6 541,557 + COO64_RS14900 0.77 +0.1 541,558 - COO64_RS14900 0.77 +0.2 541,558 - COO64_RS14900 0.77 -1.9 541,558 - COO64_RS14900 0.77 -1.0 541,558 - COO64_RS14900 0.77 -0.2 541,558 - COO64_RS14900 0.77 -0.0 541,558 - COO64_RS14900 0.77 +0.1 541,561 + COO64_RS14900 0.77 -0.9 541,561 + COO64_RS14900 0.77 +0.9 541,582 + COO64_RS14900 0.79 +1.3 541,582 + COO64_RS14900 0.79 +0.7 541,582 + COO64_RS14900 0.79 -0.3 541,583 - COO64_RS14900 0.79 -0.2 541,725 + -0.6 541,905 + COO64_RS14905 0.24 -0.6 541,955 + COO64_RS14905 0.36 +1.9 541,985 + COO64_RS14905 0.43 +0.1 541,986 - COO64_RS14905 0.43 +0.4 542,124 + COO64_RS14905 0.76 +1.2 542,162 + COO64_RS14905 0.85 +0.9 542,162 + COO64_RS14905 0.85 -0.8 542,162 + COO64_RS14905 0.85 +0.3 542,163 - COO64_RS14905 0.85 +0.3 542,163 - COO64_RS14905 0.85 +1.1 542,163 - COO64_RS14905 0.85 +0.9 542,218 + -1.3 542,219 - +0.1 542,259 + +0.1 542,259 + +0.9 542,259 + +0.4 542,259 + -0.6 542,259 + +1.1 542,259 + -0.7 542,260 - +0.3 542,260 - -1.6 542,260 - -0.1 542,261 + +0.7 542,261 + +0.1 542,261 + -0.1 542,261 + -0.1 542,262 - -1.4 542,262 - -0.5 542,262 - +0.7 542,262 - -1.1 542,262 - +0.0 542,262 - +0.1 542,300 + +0.7 542,340 + +0.7 542,341 - +0.3 542,378 + +0.1 542,442 + COO64_RS14910 0.11 -0.3 542,667 + COO64_RS14910 0.36 -1.4 542,774 + COO64_RS14910 0.48 +1.1
Or see this region's nucleotide sequence