Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00220

Experiment: L-Lysine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00219 and MPMX26_00220 are separated by 219 nucleotidesMPMX26_00220 and MPMX26_00221 are separated by 306 nucleotides MPMX26_00219: MPMX26_00219 - hypothetical protein, at 235,996 to 237,186 _00219 MPMX26_00220: MPMX26_00220 - hypothetical protein, at 237,406 to 237,735 _00220 MPMX26_00221: MPMX26_00221 - hypothetical protein, at 238,042 to 238,473 _00221 Position (kb) 237 238Strain fitness (log2 ratio) -2 -1 0 1 2at 236.431 kb on - strand, within MPMX26_00219at 236.437 kb on - strand, within MPMX26_00219at 236.437 kb on - strand, within MPMX26_00219at 236.437 kb on - strand, within MPMX26_00219at 236.437 kb on - strand, within MPMX26_00219at 236.457 kb on - strand, within MPMX26_00219at 236.457 kb on - strand, within MPMX26_00219at 236.457 kb on - strand, within MPMX26_00219at 236.475 kb on - strand, within MPMX26_00219at 236.500 kb on - strand, within MPMX26_00219at 236.526 kb on - strand, within MPMX26_00219at 236.554 kb on - strand, within MPMX26_00219at 236.575 kb on - strand, within MPMX26_00219at 236.647 kb on - strand, within MPMX26_00219at 236.711 kb on - strand, within MPMX26_00219at 236.732 kb on - strand, within MPMX26_00219at 236.765 kb on - strand, within MPMX26_00219at 236.776 kb on + strand, within MPMX26_00219at 236.784 kb on - strand, within MPMX26_00219at 236.784 kb on - strand, within MPMX26_00219at 236.784 kb on - strand, within MPMX26_00219at 236.910 kb on - strand, within MPMX26_00219at 236.928 kb on - strand, within MPMX26_00219at 236.928 kb on - strand, within MPMX26_00219at 236.928 kb on - strand, within MPMX26_00219at 236.928 kb on - strand, within MPMX26_00219at 236.928 kb on - strand, within MPMX26_00219at 236.964 kb on - strand, within MPMX26_00219at 236.965 kb on - strand, within MPMX26_00219at 236.983 kb on - strand, within MPMX26_00219at 236.983 kb on - strand, within MPMX26_00219at 236.983 kb on - strand, within MPMX26_00219at 236.991 kb on - strand, within MPMX26_00219at 237.000 kb on - strand, within MPMX26_00219at 237.081 kb on - strandat 237.081 kb on - strandat 237.093 kb on - strandat 237.093 kb on - strandat 237.114 kb on - strandat 237.114 kb on - strandat 237.509 kb on - strand, within MPMX26_00220at 237.540 kb on - strand, within MPMX26_00220at 237.540 kb on - strand, within MPMX26_00220at 237.540 kb on - strand, within MPMX26_00220at 237.576 kb on - strand, within MPMX26_00220at 237.583 kb on - strand, within MPMX26_00220at 237.583 kb on - strand, within MPMX26_00220at 237.583 kb on - strand, within MPMX26_00220at 237.584 kb on - strand, within MPMX26_00220at 237.584 kb on - strand, within MPMX26_00220at 237.584 kb on - strand, within MPMX26_00220at 237.612 kb on - strand, within MPMX26_00220at 237.649 kb on - strand, within MPMX26_00220at 237.649 kb on - strand, within MPMX26_00220at 237.649 kb on - strand, within MPMX26_00220at 237.649 kb on - strand, within MPMX26_00220at 237.663 kb on - strand, within MPMX26_00220at 237.682 kb on - strand, within MPMX26_00220at 237.682 kb on - strand, within MPMX26_00220at 237.682 kb on - strand, within MPMX26_00220at 237.682 kb on - strand, within MPMX26_00220at 237.682 kb on - strand, within MPMX26_00220at 237.682 kb on - strand, within MPMX26_00220at 237.682 kb on - strand, within MPMX26_00220at 237.687 kb on - strand, within MPMX26_00220at 237.767 kb on + strandat 237.773 kb on - strandat 237.775 kb on - strandat 238.140 kb on - strand, within MPMX26_00221at 238.150 kb on - strand, within MPMX26_00221at 238.152 kb on - strand, within MPMX26_00221at 238.152 kb on - strand, within MPMX26_00221at 238.162 kb on - strand, within MPMX26_00221at 238.162 kb on - strand, within MPMX26_00221at 238.170 kb on - strand, within MPMX26_00221at 238.176 kb on - strand, within MPMX26_00221at 238.177 kb on - strand, within MPMX26_00221at 238.255 kb on - strand, within MPMX26_00221at 238.261 kb on - strand, within MPMX26_00221at 238.309 kb on - strand, within MPMX26_00221at 238.311 kb on - strand, within MPMX26_00221at 238.311 kb on - strand, within MPMX26_00221at 238.311 kb on - strand, within MPMX26_00221at 238.311 kb on - strand, within MPMX26_00221at 238.319 kb on - strand, within MPMX26_00221at 238.330 kb on - strand, within MPMX26_00221at 238.345 kb on - strand, within MPMX26_00221at 238.390 kb on - strand, within MPMX26_00221at 238.500 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lysine (N)
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236,431 - MPMX26_00219 0.37 -0.1
236,437 - MPMX26_00219 0.37 +0.1
236,437 - MPMX26_00219 0.37 -0.1
236,437 - MPMX26_00219 0.37 +0.1
236,437 - MPMX26_00219 0.37 -0.5
236,457 - MPMX26_00219 0.39 +0.3
236,457 - MPMX26_00219 0.39 +0.4
236,457 - MPMX26_00219 0.39 +0.6
236,475 - MPMX26_00219 0.40 -0.6
236,500 - MPMX26_00219 0.42 -0.5
236,526 - MPMX26_00219 0.45 +0.6
236,554 - MPMX26_00219 0.47 +0.1
236,575 - MPMX26_00219 0.49 +0.1
236,647 - MPMX26_00219 0.55 +0.9
236,711 - MPMX26_00219 0.60 +0.5
236,732 - MPMX26_00219 0.62 -0.5
236,765 - MPMX26_00219 0.65 +0.7
236,776 + MPMX26_00219 0.65 +0.4
236,784 - MPMX26_00219 0.66 +0.3
236,784 - MPMX26_00219 0.66 -0.4
236,784 - MPMX26_00219 0.66 +0.7
236,910 - MPMX26_00219 0.77 +0.2
236,928 - MPMX26_00219 0.78 -0.2
236,928 - MPMX26_00219 0.78 +1.4
236,928 - MPMX26_00219 0.78 +0.7
236,928 - MPMX26_00219 0.78 +0.5
236,928 - MPMX26_00219 0.78 -0.3
236,964 - MPMX26_00219 0.81 +0.7
236,965 - MPMX26_00219 0.81 -0.3
236,983 - MPMX26_00219 0.83 -0.8
236,983 - MPMX26_00219 0.83 -0.1
236,983 - MPMX26_00219 0.83 +0.2
236,991 - MPMX26_00219 0.84 +0.1
237,000 - MPMX26_00219 0.84 +0.3
237,081 - +0.2
237,081 - +0.1
237,093 - +0.5
237,093 - -0.1
237,114 - +0.3
237,114 - -2.0
237,509 - MPMX26_00220 0.31 -0.3
237,540 - MPMX26_00220 0.41 -0.5
237,540 - MPMX26_00220 0.41 -0.3
237,540 - MPMX26_00220 0.41 -0.1
237,576 - MPMX26_00220 0.52 +0.3
237,583 - MPMX26_00220 0.54 -0.0
237,583 - MPMX26_00220 0.54 +0.5
237,583 - MPMX26_00220 0.54 +0.4
237,584 - MPMX26_00220 0.54 +0.0
237,584 - MPMX26_00220 0.54 +0.2
237,584 - MPMX26_00220 0.54 -0.3
237,612 - MPMX26_00220 0.62 -0.4
237,649 - MPMX26_00220 0.74 -0.0
237,649 - MPMX26_00220 0.74 -1.3
237,649 - MPMX26_00220 0.74 -0.2
237,649 - MPMX26_00220 0.74 -0.4
237,663 - MPMX26_00220 0.78 +0.0
237,682 - MPMX26_00220 0.84 -0.2
237,682 - MPMX26_00220 0.84 -0.3
237,682 - MPMX26_00220 0.84 +0.9
237,682 - MPMX26_00220 0.84 -0.1
237,682 - MPMX26_00220 0.84 -0.5
237,682 - MPMX26_00220 0.84 -0.3
237,682 - MPMX26_00220 0.84 -0.7
237,687 - MPMX26_00220 0.85 +0.1
237,767 + -2.4
237,773 - +1.4
237,775 - -1.5
238,140 - MPMX26_00221 0.23 -0.8
238,150 - MPMX26_00221 0.25 +0.0
238,152 - MPMX26_00221 0.25 -0.5
238,152 - MPMX26_00221 0.25 +0.6
238,162 - MPMX26_00221 0.28 +0.3
238,162 - MPMX26_00221 0.28 +0.5
238,170 - MPMX26_00221 0.30 +0.7
238,176 - MPMX26_00221 0.31 +0.2
238,177 - MPMX26_00221 0.31 +0.4
238,255 - MPMX26_00221 0.49 -0.5
238,261 - MPMX26_00221 0.51 -0.6
238,309 - MPMX26_00221 0.62 -0.6
238,311 - MPMX26_00221 0.62 +0.5
238,311 - MPMX26_00221 0.62 -0.5
238,311 - MPMX26_00221 0.62 -0.7
238,311 - MPMX26_00221 0.62 +0.2
238,319 - MPMX26_00221 0.64 +1.1
238,330 - MPMX26_00221 0.67 -0.2
238,345 - MPMX26_00221 0.70 +0.2
238,390 - MPMX26_00221 0.81 +1.8
238,500 - -0.6

Or see this region's nucleotide sequence