Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02165

Experiment: L-Lysine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02164 and MPMX26_02165 are separated by 3 nucleotidesMPMX26_02165 and MPMX26_02166 are separated by 168 nucleotides MPMX26_02164: MPMX26_02164 - Endolytic murein transglycosylase, at 2,219,753 to 2,220,796 _02164 MPMX26_02165: MPMX26_02165 - Aminodeoxychorismate lyase, at 2,220,800 to 2,221,612 _02165 MPMX26_02166: MPMX26_02166 - Sulfate-binding protein, at 2,221,781 to 2,222,794 _02166 Position (kb) 2220 2221 2222Strain fitness (log2 ratio) -1 0 1 2at 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.836 kb on - strandat 2219.975 kb on - strand, within MPMX26_02164at 2219.975 kb on - strand, within MPMX26_02164at 2219.975 kb on - strand, within MPMX26_02164at 2219.975 kb on - strand, within MPMX26_02164at 2219.975 kb on - strand, within MPMX26_02164at 2220.005 kb on - strand, within MPMX26_02164at 2220.005 kb on - strand, within MPMX26_02164at 2220.062 kb on - strand, within MPMX26_02164at 2220.097 kb on - strand, within MPMX26_02164at 2220.143 kb on - strand, within MPMX26_02164at 2220.143 kb on - strand, within MPMX26_02164at 2220.148 kb on - strand, within MPMX26_02164at 2220.175 kb on - strand, within MPMX26_02164at 2220.193 kb on - strand, within MPMX26_02164at 2220.203 kb on - strand, within MPMX26_02164at 2220.203 kb on - strand, within MPMX26_02164at 2220.208 kb on - strand, within MPMX26_02164at 2220.230 kb on - strand, within MPMX26_02164at 2220.230 kb on - strand, within MPMX26_02164at 2220.904 kb on - strand, within MPMX26_02165at 2220.904 kb on - strand, within MPMX26_02165at 2221.000 kb on - strand, within MPMX26_02165at 2221.034 kb on - strand, within MPMX26_02165at 2221.114 kb on - strand, within MPMX26_02165at 2221.124 kb on - strand, within MPMX26_02165at 2221.142 kb on - strand, within MPMX26_02165at 2221.142 kb on - strand, within MPMX26_02165at 2221.142 kb on - strand, within MPMX26_02165at 2221.142 kb on - strand, within MPMX26_02165at 2221.183 kb on - strand, within MPMX26_02165at 2221.225 kb on - strand, within MPMX26_02165at 2221.225 kb on - strand, within MPMX26_02165at 2221.295 kb on - strand, within MPMX26_02165at 2221.337 kb on - strand, within MPMX26_02165at 2221.337 kb on - strand, within MPMX26_02165at 2221.337 kb on - strand, within MPMX26_02165at 2221.345 kb on - strand, within MPMX26_02165at 2221.345 kb on - strand, within MPMX26_02165at 2221.550 kb on - strandat 2222.351 kb on + strand, within MPMX26_02166

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lysine (N)
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2,219,806 - -0.5
2,219,806 - +0.2
2,219,806 - +0.5
2,219,806 - -0.5
2,219,806 - +0.1
2,219,806 - +0.1
2,219,806 - -0.4
2,219,806 - +0.0
2,219,806 - -0.8
2,219,806 - +0.2
2,219,836 - -0.2
2,219,975 - MPMX26_02164 0.21 -1.2
2,219,975 - MPMX26_02164 0.21 -0.2
2,219,975 - MPMX26_02164 0.21 +0.2
2,219,975 - MPMX26_02164 0.21 -0.3
2,219,975 - MPMX26_02164 0.21 -0.1
2,220,005 - MPMX26_02164 0.24 +0.6
2,220,005 - MPMX26_02164 0.24 -1.1
2,220,062 - MPMX26_02164 0.30 +0.2
2,220,097 - MPMX26_02164 0.33 -1.1
2,220,143 - MPMX26_02164 0.37 +0.1
2,220,143 - MPMX26_02164 0.37 +0.2
2,220,148 - MPMX26_02164 0.38 +0.3
2,220,175 - MPMX26_02164 0.40 -1.1
2,220,193 - MPMX26_02164 0.42 +0.3
2,220,203 - MPMX26_02164 0.43 -0.1
2,220,203 - MPMX26_02164 0.43 -0.3
2,220,208 - MPMX26_02164 0.44 +0.1
2,220,230 - MPMX26_02164 0.46 +0.7
2,220,230 - MPMX26_02164 0.46 -0.2
2,220,904 - MPMX26_02165 0.13 -0.8
2,220,904 - MPMX26_02165 0.13 +0.1
2,221,000 - MPMX26_02165 0.25 -1.3
2,221,034 - MPMX26_02165 0.29 -0.1
2,221,114 - MPMX26_02165 0.39 -0.6
2,221,124 - MPMX26_02165 0.40 +0.1
2,221,142 - MPMX26_02165 0.42 +1.7
2,221,142 - MPMX26_02165 0.42 -1.2
2,221,142 - MPMX26_02165 0.42 -0.9
2,221,142 - MPMX26_02165 0.42 -0.4
2,221,183 - MPMX26_02165 0.47 -1.5
2,221,225 - MPMX26_02165 0.52 +0.7
2,221,225 - MPMX26_02165 0.52 +0.2
2,221,295 - MPMX26_02165 0.61 +1.9
2,221,337 - MPMX26_02165 0.66 -1.2
2,221,337 - MPMX26_02165 0.66 +1.6
2,221,337 - MPMX26_02165 0.66 +0.2
2,221,345 - MPMX26_02165 0.67 +0.2
2,221,345 - MPMX26_02165 0.67 -0.2
2,221,550 - -1.2
2,222,351 + MPMX26_02166 0.56 +0.9

Or see this region's nucleotide sequence