Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01398 and MPMX26_01399 are separated by 71 nucleotides MPMX26_01399 and MPMX26_01400 are separated by 90 nucleotides MPMX26_01400 and MPMX26_01401 are separated by 285 nucleotides
MPMX26_01398: MPMX26_01398 - hypothetical protein, at 1,454,285 to 1,454,458
_01398
MPMX26_01399: MPMX26_01399 - Non-heme chloroperoxidase, at 1,454,530 to 1,455,357
_01399
MPMX26_01400: MPMX26_01400 - hypothetical protein, at 1,455,448 to 1,455,894
_01400
MPMX26_01401: MPMX26_01401 - hypothetical protein, at 1,456,180 to 1,457,334
_01401
Position (kb)
1455
1456 Strain fitness (log2 ratio)
-2
-1
0
1 at 1454.982 kb on + strand, within MPMX26_01399 at 1455.044 kb on + strand, within MPMX26_01399 at 1455.145 kb on + strand, within MPMX26_01399 at 1455.491 kb on + strand at 1455.513 kb on + strand, within MPMX26_01400 at 1455.558 kb on + strand, within MPMX26_01400 at 1455.558 kb on + strand, within MPMX26_01400 at 1455.573 kb on + strand, within MPMX26_01400 at 1455.573 kb on + strand, within MPMX26_01400 at 1455.573 kb on + strand, within MPMX26_01400 at 1455.573 kb on + strand, within MPMX26_01400 at 1455.602 kb on + strand, within MPMX26_01400 at 1455.602 kb on + strand, within MPMX26_01400 at 1455.602 kb on + strand, within MPMX26_01400 at 1455.602 kb on + strand, within MPMX26_01400 at 1455.604 kb on + strand, within MPMX26_01400 at 1455.631 kb on + strand, within MPMX26_01400 at 1455.708 kb on + strand, within MPMX26_01400 at 1455.896 kb on + strand at 1455.896 kb on + strand at 1455.896 kb on + strand at 1455.896 kb on + strand at 1455.896 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 1,454,982 + MPMX26_01399 0.55 +0.1 1,455,044 + MPMX26_01399 0.62 -0.2 1,455,145 + MPMX26_01399 0.74 -0.5 1,455,491 + +0.4 1,455,513 + MPMX26_01400 0.15 +0.4 1,455,558 + MPMX26_01400 0.25 +0.6 1,455,558 + MPMX26_01400 0.25 +0.6 1,455,573 + MPMX26_01400 0.28 -0.2 1,455,573 + MPMX26_01400 0.28 -0.2 1,455,573 + MPMX26_01400 0.28 -0.2 1,455,573 + MPMX26_01400 0.28 -0.2 1,455,602 + MPMX26_01400 0.34 -1.2 1,455,602 + MPMX26_01400 0.34 -1.3 1,455,602 + MPMX26_01400 0.34 -1.8 1,455,602 + MPMX26_01400 0.34 +1.2 1,455,604 + MPMX26_01400 0.35 -0.9 1,455,631 + MPMX26_01400 0.41 +0.9 1,455,708 + MPMX26_01400 0.58 -0.4 1,455,896 + +0.5 1,455,896 + +0.7 1,455,896 + +0.4 1,455,896 + +0.1 1,455,896 + -0.5
Or see this region's nucleotide sequence