Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01400

Experiment: L-Lysine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01398 and MPMX26_01399 are separated by 71 nucleotidesMPMX26_01399 and MPMX26_01400 are separated by 90 nucleotidesMPMX26_01400 and MPMX26_01401 are separated by 285 nucleotides MPMX26_01398: MPMX26_01398 - hypothetical protein, at 1,454,285 to 1,454,458 _01398 MPMX26_01399: MPMX26_01399 - Non-heme chloroperoxidase, at 1,454,530 to 1,455,357 _01399 MPMX26_01400: MPMX26_01400 - hypothetical protein, at 1,455,448 to 1,455,894 _01400 MPMX26_01401: MPMX26_01401 - hypothetical protein, at 1,456,180 to 1,457,334 _01401 Position (kb) 1455 1456Strain fitness (log2 ratio) -2 -1 0 1at 1454.982 kb on + strand, within MPMX26_01399at 1455.044 kb on + strand, within MPMX26_01399at 1455.145 kb on + strand, within MPMX26_01399at 1455.491 kb on + strandat 1455.513 kb on + strand, within MPMX26_01400at 1455.558 kb on + strand, within MPMX26_01400at 1455.558 kb on + strand, within MPMX26_01400at 1455.573 kb on + strand, within MPMX26_01400at 1455.573 kb on + strand, within MPMX26_01400at 1455.573 kb on + strand, within MPMX26_01400at 1455.573 kb on + strand, within MPMX26_01400at 1455.602 kb on + strand, within MPMX26_01400at 1455.602 kb on + strand, within MPMX26_01400at 1455.602 kb on + strand, within MPMX26_01400at 1455.602 kb on + strand, within MPMX26_01400at 1455.604 kb on + strand, within MPMX26_01400at 1455.631 kb on + strand, within MPMX26_01400at 1455.708 kb on + strand, within MPMX26_01400at 1455.896 kb on + strandat 1455.896 kb on + strandat 1455.896 kb on + strandat 1455.896 kb on + strandat 1455.896 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lysine (N)
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1,454,982 + MPMX26_01399 0.55 +0.1
1,455,044 + MPMX26_01399 0.62 -0.2
1,455,145 + MPMX26_01399 0.74 -0.5
1,455,491 + +0.4
1,455,513 + MPMX26_01400 0.15 +0.4
1,455,558 + MPMX26_01400 0.25 +0.6
1,455,558 + MPMX26_01400 0.25 +0.6
1,455,573 + MPMX26_01400 0.28 -0.2
1,455,573 + MPMX26_01400 0.28 -0.2
1,455,573 + MPMX26_01400 0.28 -0.2
1,455,573 + MPMX26_01400 0.28 -0.2
1,455,602 + MPMX26_01400 0.34 -1.2
1,455,602 + MPMX26_01400 0.34 -1.3
1,455,602 + MPMX26_01400 0.34 -1.8
1,455,602 + MPMX26_01400 0.34 +1.2
1,455,604 + MPMX26_01400 0.35 -0.9
1,455,631 + MPMX26_01400 0.41 +0.9
1,455,708 + MPMX26_01400 0.58 -0.4
1,455,896 + +0.5
1,455,896 + +0.7
1,455,896 + +0.4
1,455,896 + +0.1
1,455,896 + -0.5

Or see this region's nucleotide sequence