Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01092

Experiment: L-Lysine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01090 and MPMX26_01091 are separated by 144 nucleotidesMPMX26_01091 and MPMX26_01092 are separated by 317 nucleotidesMPMX26_01092 and MPMX26_01093 are separated by 51 nucleotides MPMX26_01090: MPMX26_01090 - Adenylosuccinate synthetase, at 1,159,560 to 1,160,879 _01090 MPMX26_01091: MPMX26_01091 - hypothetical protein, at 1,161,024 to 1,161,332 _01091 MPMX26_01092: MPMX26_01092 - Metalloprotease LoiP, at 1,161,650 to 1,162,429 _01092 MPMX26_01093: MPMX26_01093 - Protein tas, at 1,162,481 to 1,163,530 _01093 Position (kb) 1161 1162 1163Strain fitness (log2 ratio) -1 0 1 2at 1160.890 kb on + strandat 1161.048 kb on + strandat 1161.132 kb on + strand, within MPMX26_01091at 1161.288 kb on + strand, within MPMX26_01091at 1161.500 kb on - strandat 1161.696 kb on + strandat 1161.708 kb on + strandat 1161.853 kb on + strand, within MPMX26_01092at 1161.853 kb on + strand, within MPMX26_01092at 1161.853 kb on + strand, within MPMX26_01092at 1161.878 kb on + strand, within MPMX26_01092at 1161.882 kb on + strand, within MPMX26_01092at 1161.930 kb on + strand, within MPMX26_01092at 1161.940 kb on + strand, within MPMX26_01092at 1161.940 kb on + strand, within MPMX26_01092at 1161.951 kb on + strand, within MPMX26_01092at 1161.951 kb on + strand, within MPMX26_01092at 1161.951 kb on + strand, within MPMX26_01092at 1161.970 kb on + strand, within MPMX26_01092at 1161.971 kb on + strand, within MPMX26_01092at 1161.976 kb on + strand, within MPMX26_01092at 1161.976 kb on + strand, within MPMX26_01092at 1161.999 kb on + strand, within MPMX26_01092at 1161.999 kb on + strand, within MPMX26_01092at 1161.999 kb on + strand, within MPMX26_01092at 1161.999 kb on + strand, within MPMX26_01092at 1161.999 kb on + strand, within MPMX26_01092at 1161.999 kb on + strand, within MPMX26_01092at 1161.999 kb on + strand, within MPMX26_01092at 1161.999 kb on + strand, within MPMX26_01092at 1161.999 kb on + strand, within MPMX26_01092at 1161.999 kb on + strand, within MPMX26_01092at 1161.999 kb on + strand, within MPMX26_01092at 1161.999 kb on + strand, within MPMX26_01092at 1161.999 kb on + strand, within MPMX26_01092at 1162.031 kb on + strand, within MPMX26_01092at 1162.031 kb on + strand, within MPMX26_01092at 1162.049 kb on + strand, within MPMX26_01092at 1162.056 kb on + strand, within MPMX26_01092at 1162.056 kb on + strand, within MPMX26_01092at 1162.056 kb on + strand, within MPMX26_01092at 1162.056 kb on + strand, within MPMX26_01092at 1162.056 kb on + strand, within MPMX26_01092at 1162.093 kb on + strand, within MPMX26_01092at 1162.093 kb on + strand, within MPMX26_01092at 1162.093 kb on + strand, within MPMX26_01092at 1162.093 kb on + strand, within MPMX26_01092at 1162.093 kb on + strand, within MPMX26_01092at 1162.093 kb on + strand, within MPMX26_01092at 1162.093 kb on + strand, within MPMX26_01092at 1162.093 kb on + strand, within MPMX26_01092at 1162.093 kb on + strand, within MPMX26_01092at 1162.093 kb on + strand, within MPMX26_01092at 1162.093 kb on + strand, within MPMX26_01092at 1162.121 kb on + strand, within MPMX26_01092at 1162.121 kb on + strand, within MPMX26_01092at 1162.126 kb on + strand, within MPMX26_01092at 1162.126 kb on + strand, within MPMX26_01092at 1162.126 kb on + strand, within MPMX26_01092at 1162.126 kb on + strand, within MPMX26_01092at 1162.126 kb on + strand, within MPMX26_01092at 1162.126 kb on + strand, within MPMX26_01092at 1162.126 kb on + strand, within MPMX26_01092at 1162.126 kb on + strand, within MPMX26_01092at 1162.126 kb on + strand, within MPMX26_01092at 1162.145 kb on + strand, within MPMX26_01092at 1162.145 kb on + strand, within MPMX26_01092at 1162.158 kb on + strand, within MPMX26_01092at 1162.158 kb on + strand, within MPMX26_01092at 1162.158 kb on + strand, within MPMX26_01092at 1162.190 kb on + strand, within MPMX26_01092at 1162.191 kb on + strand, within MPMX26_01092at 1162.196 kb on + strand, within MPMX26_01092at 1162.196 kb on + strand, within MPMX26_01092at 1162.196 kb on + strand, within MPMX26_01092at 1162.196 kb on + strand, within MPMX26_01092at 1162.196 kb on + strand, within MPMX26_01092at 1162.196 kb on + strand, within MPMX26_01092at 1162.196 kb on + strand, within MPMX26_01092at 1162.196 kb on + strand, within MPMX26_01092at 1162.196 kb on + strand, within MPMX26_01092at 1162.196 kb on + strand, within MPMX26_01092at 1162.196 kb on + strand, within MPMX26_01092at 1162.196 kb on + strand, within MPMX26_01092at 1162.215 kb on + strand, within MPMX26_01092at 1162.215 kb on + strand, within MPMX26_01092at 1162.217 kb on + strand, within MPMX26_01092at 1162.217 kb on + strand, within MPMX26_01092at 1162.224 kb on + strand, within MPMX26_01092at 1162.232 kb on + strand, within MPMX26_01092at 1162.241 kb on + strand, within MPMX26_01092at 1162.281 kb on + strand, within MPMX26_01092at 1162.320 kb on + strand, within MPMX26_01092at 1162.320 kb on + strand, within MPMX26_01092at 1162.354 kb on + strandat 1162.354 kb on + strandat 1162.371 kb on + strandat 1162.447 kb on + strandat 1162.499 kb on - strandat 1162.663 kb on - strand, within MPMX26_01093at 1162.829 kb on - strand, within MPMX26_01093at 1162.850 kb on - strand, within MPMX26_01093at 1163.055 kb on + strand, within MPMX26_01093

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lysine (N)
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1,160,890 + -0.3
1,161,048 + -0.4
1,161,132 + MPMX26_01091 0.35 +0.1
1,161,288 + MPMX26_01091 0.85 -0.8
1,161,500 - -0.3
1,161,696 + +0.2
1,161,708 + -0.0
1,161,853 + MPMX26_01092 0.26 +0.5
1,161,853 + MPMX26_01092 0.26 +0.0
1,161,853 + MPMX26_01092 0.26 +0.2
1,161,878 + MPMX26_01092 0.29 -0.1
1,161,882 + MPMX26_01092 0.30 +0.2
1,161,930 + MPMX26_01092 0.36 -0.6
1,161,940 + MPMX26_01092 0.37 -0.3
1,161,940 + MPMX26_01092 0.37 -0.2
1,161,951 + MPMX26_01092 0.39 -0.3
1,161,951 + MPMX26_01092 0.39 -0.1
1,161,951 + MPMX26_01092 0.39 +1.1
1,161,970 + MPMX26_01092 0.41 +0.1
1,161,971 + MPMX26_01092 0.41 -0.0
1,161,976 + MPMX26_01092 0.42 -0.0
1,161,976 + MPMX26_01092 0.42 -0.5
1,161,999 + MPMX26_01092 0.45 +0.2
1,161,999 + MPMX26_01092 0.45 +0.3
1,161,999 + MPMX26_01092 0.45 +0.2
1,161,999 + MPMX26_01092 0.45 +0.0
1,161,999 + MPMX26_01092 0.45 +0.0
1,161,999 + MPMX26_01092 0.45 +0.1
1,161,999 + MPMX26_01092 0.45 +0.2
1,161,999 + MPMX26_01092 0.45 -0.4
1,161,999 + MPMX26_01092 0.45 +0.3
1,161,999 + MPMX26_01092 0.45 +0.3
1,161,999 + MPMX26_01092 0.45 +0.1
1,161,999 + MPMX26_01092 0.45 -0.1
1,161,999 + MPMX26_01092 0.45 -0.0
1,162,031 + MPMX26_01092 0.49 +0.3
1,162,031 + MPMX26_01092 0.49 -0.2
1,162,049 + MPMX26_01092 0.51 +0.3
1,162,056 + MPMX26_01092 0.52 +0.2
1,162,056 + MPMX26_01092 0.52 +0.4
1,162,056 + MPMX26_01092 0.52 -0.6
1,162,056 + MPMX26_01092 0.52 +0.2
1,162,056 + MPMX26_01092 0.52 -0.1
1,162,093 + MPMX26_01092 0.57 +0.6
1,162,093 + MPMX26_01092 0.57 +0.0
1,162,093 + MPMX26_01092 0.57 -0.5
1,162,093 + MPMX26_01092 0.57 +0.4
1,162,093 + MPMX26_01092 0.57 +0.7
1,162,093 + MPMX26_01092 0.57 -0.8
1,162,093 + MPMX26_01092 0.57 +0.3
1,162,093 + MPMX26_01092 0.57 +0.7
1,162,093 + MPMX26_01092 0.57 +0.5
1,162,093 + MPMX26_01092 0.57 -0.1
1,162,093 + MPMX26_01092 0.57 +0.2
1,162,121 + MPMX26_01092 0.60 -0.1
1,162,121 + MPMX26_01092 0.60 +0.2
1,162,126 + MPMX26_01092 0.61 -0.1
1,162,126 + MPMX26_01092 0.61 +0.1
1,162,126 + MPMX26_01092 0.61 +0.1
1,162,126 + MPMX26_01092 0.61 +0.7
1,162,126 + MPMX26_01092 0.61 -0.8
1,162,126 + MPMX26_01092 0.61 +0.1
1,162,126 + MPMX26_01092 0.61 -0.7
1,162,126 + MPMX26_01092 0.61 -0.1
1,162,126 + MPMX26_01092 0.61 +0.5
1,162,145 + MPMX26_01092 0.63 -0.0
1,162,145 + MPMX26_01092 0.63 +0.2
1,162,158 + MPMX26_01092 0.65 +0.1
1,162,158 + MPMX26_01092 0.65 +1.0
1,162,158 + MPMX26_01092 0.65 -0.8
1,162,190 + MPMX26_01092 0.69 +0.2
1,162,191 + MPMX26_01092 0.69 -1.1
1,162,196 + MPMX26_01092 0.70 +1.0
1,162,196 + MPMX26_01092 0.70 +0.1
1,162,196 + MPMX26_01092 0.70 +0.4
1,162,196 + MPMX26_01092 0.70 +0.1
1,162,196 + MPMX26_01092 0.70 +1.2
1,162,196 + MPMX26_01092 0.70 +1.2
1,162,196 + MPMX26_01092 0.70 +0.4
1,162,196 + MPMX26_01092 0.70 +0.6
1,162,196 + MPMX26_01092 0.70 +2.7
1,162,196 + MPMX26_01092 0.70 -0.0
1,162,196 + MPMX26_01092 0.70 -0.2
1,162,196 + MPMX26_01092 0.70 +0.2
1,162,215 + MPMX26_01092 0.72 -0.5
1,162,215 + MPMX26_01092 0.72 -0.2
1,162,217 + MPMX26_01092 0.73 -0.7
1,162,217 + MPMX26_01092 0.73 -0.2
1,162,224 + MPMX26_01092 0.74 +0.8
1,162,232 + MPMX26_01092 0.75 +0.0
1,162,241 + MPMX26_01092 0.76 -0.1
1,162,281 + MPMX26_01092 0.81 -0.6
1,162,320 + MPMX26_01092 0.86 -0.6
1,162,320 + MPMX26_01092 0.86 +0.3
1,162,354 + +0.3
1,162,354 + +0.7
1,162,371 + +0.4
1,162,447 + +0.5
1,162,499 - -0.1
1,162,663 - MPMX26_01093 0.17 -0.9
1,162,829 - MPMX26_01093 0.33 -0.5
1,162,850 - MPMX26_01093 0.35 +0.3
1,163,055 + MPMX26_01093 0.55 -0.0

Or see this region's nucleotide sequence