Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01025 and MPMX26_01026 are separated by 359 nucleotides MPMX26_01026 and MPMX26_01027 are separated by 150 nucleotides
MPMX26_01025: MPMX26_01025 - hypothetical protein, at 1,083,616 to 1,084,110
_01025
MPMX26_01026: MPMX26_01026 - Dual-specificity RNA pseudouridine synthase RluA, at 1,084,470 to 1,085,114
_01026
MPMX26_01027: MPMX26_01027 - RNA polymerase-associated protein RapA, at 1,085,265 to 1,088,093
_01027
Position (kb)
1084
1085
1086 Strain fitness (log2 ratio)
-2
-1
0
1 at 1083.831 kb on + strand, within MPMX26_01025 at 1083.897 kb on + strand, within MPMX26_01025 at 1083.951 kb on + strand, within MPMX26_01025 at 1084.460 kb on + strand at 1084.460 kb on + strand at 1084.460 kb on + strand at 1084.506 kb on + strand at 1084.539 kb on + strand, within MPMX26_01026 at 1084.539 kb on + strand, within MPMX26_01026 at 1084.539 kb on + strand, within MPMX26_01026 at 1084.539 kb on + strand, within MPMX26_01026 at 1084.539 kb on + strand, within MPMX26_01026 at 1084.551 kb on + strand, within MPMX26_01026 at 1084.569 kb on + strand, within MPMX26_01026 at 1084.593 kb on + strand, within MPMX26_01026 at 1084.593 kb on + strand, within MPMX26_01026 at 1084.598 kb on + strand, within MPMX26_01026 at 1084.603 kb on + strand, within MPMX26_01026 at 1084.632 kb on + strand, within MPMX26_01026 at 1084.637 kb on + strand, within MPMX26_01026 at 1084.640 kb on + strand, within MPMX26_01026 at 1084.642 kb on + strand, within MPMX26_01026 at 1084.642 kb on + strand, within MPMX26_01026 at 1084.742 kb on + strand, within MPMX26_01026 at 1084.758 kb on + strand, within MPMX26_01026 at 1084.771 kb on + strand, within MPMX26_01026 at 1084.774 kb on + strand, within MPMX26_01026 at 1084.774 kb on + strand, within MPMX26_01026 at 1084.774 kb on + strand, within MPMX26_01026 at 1084.812 kb on + strand, within MPMX26_01026 at 1084.812 kb on + strand, within MPMX26_01026 at 1084.833 kb on + strand, within MPMX26_01026 at 1084.891 kb on + strand, within MPMX26_01026 at 1084.898 kb on + strand, within MPMX26_01026 at 1084.906 kb on + strand, within MPMX26_01026 at 1084.938 kb on + strand, within MPMX26_01026 at 1084.963 kb on + strand, within MPMX26_01026 at 1084.963 kb on + strand, within MPMX26_01026 at 1084.963 kb on + strand, within MPMX26_01026 at 1084.972 kb on + strand, within MPMX26_01026 at 1085.001 kb on + strand, within MPMX26_01026 at 1085.001 kb on + strand, within MPMX26_01026 at 1085.018 kb on + strand, within MPMX26_01026 at 1085.029 kb on + strand, within MPMX26_01026 at 1085.029 kb on + strand, within MPMX26_01026 at 1085.029 kb on + strand, within MPMX26_01026 at 1085.029 kb on + strand, within MPMX26_01026 at 1085.029 kb on + strand, within MPMX26_01026 at 1085.029 kb on + strand, within MPMX26_01026 at 1085.029 kb on + strand, within MPMX26_01026 at 1085.066 kb on + strand at 1085.067 kb on + strand at 1085.145 kb on + strand at 1085.192 kb on + strand at 1085.297 kb on + strand at 1085.338 kb on + strand at 1085.412 kb on + strand at 1085.412 kb on + strand at 1085.412 kb on + strand at 1085.463 kb on + strand at 1085.498 kb on + strand at 1085.512 kb on + strand at 1085.530 kb on + strand at 1085.559 kb on + strand, within MPMX26_01027 at 1085.575 kb on + strand, within MPMX26_01027 at 1085.597 kb on + strand, within MPMX26_01027 at 1085.597 kb on + strand, within MPMX26_01027 at 1085.604 kb on + strand, within MPMX26_01027 at 1085.604 kb on + strand, within MPMX26_01027 at 1085.604 kb on + strand, within MPMX26_01027 at 1085.604 kb on + strand, within MPMX26_01027 at 1085.604 kb on + strand, within MPMX26_01027 at 1085.647 kb on + strand, within MPMX26_01027 at 1085.647 kb on + strand, within MPMX26_01027 at 1085.647 kb on + strand, within MPMX26_01027 at 1085.647 kb on + strand, within MPMX26_01027 at 1085.647 kb on + strand, within MPMX26_01027 at 1085.647 kb on + strand, within MPMX26_01027 at 1085.647 kb on + strand, within MPMX26_01027 at 1085.647 kb on + strand, within MPMX26_01027 at 1085.647 kb on + strand, within MPMX26_01027 at 1085.647 kb on + strand, within MPMX26_01027 at 1085.652 kb on + strand, within MPMX26_01027 at 1085.688 kb on + strand, within MPMX26_01027 at 1085.688 kb on + strand, within MPMX26_01027 at 1085.693 kb on + strand, within MPMX26_01027 at 1085.725 kb on + strand, within MPMX26_01027 at 1085.731 kb on + strand, within MPMX26_01027 at 1085.731 kb on + strand, within MPMX26_01027 at 1085.731 kb on + strand, within MPMX26_01027 at 1085.731 kb on + strand, within MPMX26_01027 at 1085.731 kb on + strand, within MPMX26_01027 at 1085.747 kb on + strand, within MPMX26_01027 at 1085.764 kb on + strand, within MPMX26_01027 at 1085.769 kb on + strand, within MPMX26_01027 at 1085.769 kb on + strand, within MPMX26_01027 at 1085.774 kb on + strand, within MPMX26_01027 at 1085.776 kb on + strand, within MPMX26_01027 at 1085.776 kb on + strand, within MPMX26_01027 at 1085.788 kb on + strand, within MPMX26_01027 at 1085.788 kb on + strand, within MPMX26_01027 at 1085.788 kb on + strand, within MPMX26_01027 at 1085.798 kb on + strand, within MPMX26_01027 at 1085.811 kb on + strand, within MPMX26_01027 at 1085.824 kb on - strand, within MPMX26_01027 at 1085.835 kb on + strand, within MPMX26_01027 at 1085.855 kb on + strand, within MPMX26_01027 at 1085.855 kb on + strand, within MPMX26_01027 at 1085.855 kb on + strand, within MPMX26_01027 at 1085.969 kb on + strand, within MPMX26_01027 at 1085.993 kb on + strand, within MPMX26_01027 at 1086.005 kb on + strand, within MPMX26_01027 at 1086.005 kb on + strand, within MPMX26_01027 at 1086.010 kb on + strand, within MPMX26_01027 at 1086.043 kb on + strand, within MPMX26_01027 at 1086.064 kb on + strand, within MPMX26_01027 at 1086.064 kb on + strand, within MPMX26_01027 at 1086.083 kb on + strand, within MPMX26_01027 at 1086.087 kb on + strand, within MPMX26_01027 at 1086.096 kb on + strand, within MPMX26_01027
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 1,083,831 + MPMX26_01025 0.43 -0.2 1,083,897 + MPMX26_01025 0.57 +0.0 1,083,951 + MPMX26_01025 0.68 +0.6 1,084,460 + +0.0 1,084,460 + -0.1 1,084,460 + -0.5 1,084,506 + +0.8 1,084,539 + MPMX26_01026 0.11 +0.3 1,084,539 + MPMX26_01026 0.11 +0.3 1,084,539 + MPMX26_01026 0.11 +0.6 1,084,539 + MPMX26_01026 0.11 +0.5 1,084,539 + MPMX26_01026 0.11 +0.1 1,084,551 + MPMX26_01026 0.13 +1.6 1,084,569 + MPMX26_01026 0.15 +0.4 1,084,593 + MPMX26_01026 0.19 -0.1 1,084,593 + MPMX26_01026 0.19 +0.2 1,084,598 + MPMX26_01026 0.20 +0.4 1,084,603 + MPMX26_01026 0.21 -0.2 1,084,632 + MPMX26_01026 0.25 +1.1 1,084,637 + MPMX26_01026 0.26 -0.2 1,084,640 + MPMX26_01026 0.26 +0.2 1,084,642 + MPMX26_01026 0.27 +0.2 1,084,642 + MPMX26_01026 0.27 -0.1 1,084,742 + MPMX26_01026 0.42 +0.5 1,084,758 + MPMX26_01026 0.45 -0.6 1,084,771 + MPMX26_01026 0.47 -0.2 1,084,774 + MPMX26_01026 0.47 +0.4 1,084,774 + MPMX26_01026 0.47 -0.0 1,084,774 + MPMX26_01026 0.47 -0.3 1,084,812 + MPMX26_01026 0.53 +0.4 1,084,812 + MPMX26_01026 0.53 +0.7 1,084,833 + MPMX26_01026 0.56 +0.4 1,084,891 + MPMX26_01026 0.65 +0.6 1,084,898 + MPMX26_01026 0.66 +0.0 1,084,906 + MPMX26_01026 0.68 +0.4 1,084,938 + MPMX26_01026 0.73 -0.1 1,084,963 + MPMX26_01026 0.76 +0.3 1,084,963 + MPMX26_01026 0.76 -0.0 1,084,963 + MPMX26_01026 0.76 +0.8 1,084,972 + MPMX26_01026 0.78 +0.3 1,085,001 + MPMX26_01026 0.82 +0.7 1,085,001 + MPMX26_01026 0.82 +0.7 1,085,018 + MPMX26_01026 0.85 -0.1 1,085,029 + MPMX26_01026 0.87 +0.9 1,085,029 + MPMX26_01026 0.87 -0.3 1,085,029 + MPMX26_01026 0.87 -0.8 1,085,029 + MPMX26_01026 0.87 +0.9 1,085,029 + MPMX26_01026 0.87 -0.1 1,085,029 + MPMX26_01026 0.87 +1.6 1,085,029 + MPMX26_01026 0.87 -0.1 1,085,066 + +0.3 1,085,067 + +0.3 1,085,145 + -1.9 1,085,192 + -1.6 1,085,297 + -0.5 1,085,338 + -0.4 1,085,412 + -0.1 1,085,412 + +0.3 1,085,412 + -0.5 1,085,463 + -0.6 1,085,498 + +0.5 1,085,512 + -0.8 1,085,530 + -0.6 1,085,559 + MPMX26_01027 0.10 -0.1 1,085,575 + MPMX26_01027 0.11 -0.7 1,085,597 + MPMX26_01027 0.12 -0.0 1,085,597 + MPMX26_01027 0.12 +0.5 1,085,604 + MPMX26_01027 0.12 -1.1 1,085,604 + MPMX26_01027 0.12 -0.4 1,085,604 + MPMX26_01027 0.12 -0.4 1,085,604 + MPMX26_01027 0.12 -0.4 1,085,604 + MPMX26_01027 0.12 -0.7 1,085,647 + MPMX26_01027 0.14 +0.1 1,085,647 + MPMX26_01027 0.14 +0.4 1,085,647 + MPMX26_01027 0.14 -0.5 1,085,647 + MPMX26_01027 0.14 -0.5 1,085,647 + MPMX26_01027 0.14 +0.3 1,085,647 + MPMX26_01027 0.14 -0.3 1,085,647 + MPMX26_01027 0.14 -0.3 1,085,647 + MPMX26_01027 0.14 -0.7 1,085,647 + MPMX26_01027 0.14 -0.5 1,085,647 + MPMX26_01027 0.14 -0.9 1,085,652 + MPMX26_01027 0.14 -1.0 1,085,688 + MPMX26_01027 0.15 -0.1 1,085,688 + MPMX26_01027 0.15 -1.5 1,085,693 + MPMX26_01027 0.15 -0.1 1,085,725 + MPMX26_01027 0.16 -0.5 1,085,731 + MPMX26_01027 0.16 -0.2 1,085,731 + MPMX26_01027 0.16 -0.7 1,085,731 + MPMX26_01027 0.16 -0.6 1,085,731 + MPMX26_01027 0.16 -0.2 1,085,731 + MPMX26_01027 0.16 -0.3 1,085,747 + MPMX26_01027 0.17 -0.4 1,085,764 + MPMX26_01027 0.18 -0.1 1,085,769 + MPMX26_01027 0.18 -0.5 1,085,769 + MPMX26_01027 0.18 +0.2 1,085,774 + MPMX26_01027 0.18 +0.4 1,085,776 + MPMX26_01027 0.18 -0.1 1,085,776 + MPMX26_01027 0.18 +0.2 1,085,788 + MPMX26_01027 0.18 +0.8 1,085,788 + MPMX26_01027 0.18 -0.4 1,085,788 + MPMX26_01027 0.18 -0.4 1,085,798 + MPMX26_01027 0.19 -0.7 1,085,811 + MPMX26_01027 0.19 +0.3 1,085,824 - MPMX26_01027 0.20 -0.4 1,085,835 + MPMX26_01027 0.20 -0.1 1,085,855 + MPMX26_01027 0.21 -0.7 1,085,855 + MPMX26_01027 0.21 -0.5 1,085,855 + MPMX26_01027 0.21 +0.8 1,085,969 + MPMX26_01027 0.25 -0.5 1,085,993 + MPMX26_01027 0.26 -0.6 1,086,005 + MPMX26_01027 0.26 -1.1 1,086,005 + MPMX26_01027 0.26 -0.1 1,086,010 + MPMX26_01027 0.26 -0.4 1,086,043 + MPMX26_01027 0.28 -0.3 1,086,064 + MPMX26_01027 0.28 -0.5 1,086,064 + MPMX26_01027 0.28 -0.1 1,086,083 + MPMX26_01027 0.29 +0.5 1,086,087 + MPMX26_01027 0.29 +0.0 1,086,096 + MPMX26_01027 0.29 +1.0
Or see this region's nucleotide sequence