Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00190

Experiment: L-Lysine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00188 and MPMX26_00189 are separated by 5 nucleotidesMPMX26_00189 and MPMX26_00190 overlap by 4 nucleotidesMPMX26_00190 and MPMX26_00191 are separated by 9 nucleotides MPMX26_00188: MPMX26_00188 - Porphobilinogen deaminase, at 203,334 to 204,257 _00188 MPMX26_00189: MPMX26_00189 - hypothetical protein, at 204,263 to 205,045 _00189 MPMX26_00190: MPMX26_00190 - hypothetical protein, at 205,042 to 205,890 _00190 MPMX26_00191: MPMX26_00191 - hypothetical protein, at 205,900 to 207,093 _00191 Position (kb) 205 206Strain fitness (log2 ratio) -1 0 1 2at 204.236 kb on + strandat 204.236 kb on + strandat 204.236 kb on + strandat 204.236 kb on + strandat 204.258 kb on + strandat 205.010 kb on + strandat 205.010 kb on + strandat 205.010 kb on + strandat 205.010 kb on + strandat 205.015 kb on + strandat 205.034 kb on + strandat 205.110 kb on + strandat 205.110 kb on + strandat 205.157 kb on + strand, within MPMX26_00190at 205.157 kb on + strand, within MPMX26_00190at 205.162 kb on + strand, within MPMX26_00190at 205.167 kb on + strand, within MPMX26_00190at 205.167 kb on + strand, within MPMX26_00190at 205.172 kb on + strand, within MPMX26_00190at 205.172 kb on + strand, within MPMX26_00190at 205.191 kb on + strand, within MPMX26_00190at 205.191 kb on + strand, within MPMX26_00190at 205.191 kb on + strand, within MPMX26_00190at 205.234 kb on + strand, within MPMX26_00190at 205.248 kb on + strand, within MPMX26_00190at 205.258 kb on + strand, within MPMX26_00190at 205.306 kb on + strand, within MPMX26_00190at 205.322 kb on + strand, within MPMX26_00190at 205.343 kb on + strand, within MPMX26_00190at 205.363 kb on + strand, within MPMX26_00190at 205.387 kb on + strand, within MPMX26_00190at 205.387 kb on + strand, within MPMX26_00190at 205.409 kb on + strand, within MPMX26_00190at 205.409 kb on + strand, within MPMX26_00190at 205.409 kb on + strand, within MPMX26_00190at 205.409 kb on + strand, within MPMX26_00190at 205.409 kb on + strand, within MPMX26_00190at 205.409 kb on + strand, within MPMX26_00190at 205.474 kb on + strand, within MPMX26_00190at 205.491 kb on + strand, within MPMX26_00190at 205.491 kb on + strand, within MPMX26_00190at 205.491 kb on + strand, within MPMX26_00190at 205.491 kb on + strand, within MPMX26_00190at 205.491 kb on + strand, within MPMX26_00190at 205.556 kb on + strand, within MPMX26_00190at 205.690 kb on + strand, within MPMX26_00190at 205.704 kb on + strand, within MPMX26_00190at 205.707 kb on + strand, within MPMX26_00190at 205.718 kb on + strand, within MPMX26_00190at 205.728 kb on + strand, within MPMX26_00190at 205.792 kb on + strand, within MPMX26_00190at 205.885 kb on + strandat 205.898 kb on + strandat 205.898 kb on + strandat 205.898 kb on + strandat 205.898 kb on + strandat 205.919 kb on + strandat 205.919 kb on + strandat 205.927 kb on + strandat 205.929 kb on + strandat 205.929 kb on + strandat 205.929 kb on + strandat 205.929 kb on + strandat 205.929 kb on + strandat 205.929 kb on + strandat 205.942 kb on + strandat 205.960 kb on + strandat 205.960 kb on + strandat 205.965 kb on + strandat 205.971 kb on + strandat 205.984 kb on + strandat 205.984 kb on + strandat 205.984 kb on + strandat 206.079 kb on + strand, within MPMX26_00191at 206.079 kb on + strand, within MPMX26_00191at 206.079 kb on + strand, within MPMX26_00191at 206.079 kb on + strand, within MPMX26_00191at 206.079 kb on + strand, within MPMX26_00191at 206.084 kb on + strand, within MPMX26_00191at 206.108 kb on + strand, within MPMX26_00191at 206.108 kb on + strand, within MPMX26_00191at 206.108 kb on + strand, within MPMX26_00191at 206.108 kb on + strand, within MPMX26_00191at 206.116 kb on - strand, within MPMX26_00191at 206.118 kb on + strand, within MPMX26_00191at 206.118 kb on + strand, within MPMX26_00191at 206.118 kb on + strand, within MPMX26_00191at 206.118 kb on + strand, within MPMX26_00191at 206.132 kb on + strand, within MPMX26_00191at 206.169 kb on + strand, within MPMX26_00191at 206.187 kb on + strand, within MPMX26_00191at 206.187 kb on + strand, within MPMX26_00191at 206.193 kb on + strand, within MPMX26_00191at 206.242 kb on + strand, within MPMX26_00191at 206.242 kb on + strand, within MPMX26_00191at 206.242 kb on + strand, within MPMX26_00191at 206.269 kb on + strand, within MPMX26_00191at 206.269 kb on + strand, within MPMX26_00191at 206.286 kb on + strand, within MPMX26_00191at 206.311 kb on + strand, within MPMX26_00191at 206.336 kb on + strand, within MPMX26_00191at 206.351 kb on + strand, within MPMX26_00191at 206.397 kb on + strand, within MPMX26_00191at 206.430 kb on + strand, within MPMX26_00191at 206.431 kb on + strand, within MPMX26_00191at 206.444 kb on + strand, within MPMX26_00191at 206.477 kb on + strand, within MPMX26_00191at 206.487 kb on + strand, within MPMX26_00191at 206.487 kb on + strand, within MPMX26_00191at 206.515 kb on + strand, within MPMX26_00191at 206.521 kb on + strand, within MPMX26_00191at 206.587 kb on + strand, within MPMX26_00191at 206.665 kb on + strand, within MPMX26_00191

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lysine (N)
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204,236 + +0.3
204,236 + -0.1
204,236 + -0.2
204,236 + +1.5
204,258 + +0.6
205,010 + -0.2
205,010 + +0.1
205,010 + -0.0
205,010 + +0.5
205,015 + +0.2
205,034 + +1.4
205,110 + +0.6
205,110 + +0.8
205,157 + MPMX26_00190 0.14 +1.0
205,157 + MPMX26_00190 0.14 +1.0
205,162 + MPMX26_00190 0.14 +1.2
205,167 + MPMX26_00190 0.15 +0.5
205,167 + MPMX26_00190 0.15 +0.0
205,172 + MPMX26_00190 0.15 -1.0
205,172 + MPMX26_00190 0.15 +1.6
205,191 + MPMX26_00190 0.18 +0.4
205,191 + MPMX26_00190 0.18 +1.9
205,191 + MPMX26_00190 0.18 +1.4
205,234 + MPMX26_00190 0.23 -0.3
205,248 + MPMX26_00190 0.24 +2.5
205,258 + MPMX26_00190 0.25 +0.2
205,306 + MPMX26_00190 0.31 +0.5
205,322 + MPMX26_00190 0.33 +0.3
205,343 + MPMX26_00190 0.35 +0.5
205,363 + MPMX26_00190 0.38 +0.8
205,387 + MPMX26_00190 0.41 -0.9
205,387 + MPMX26_00190 0.41 +2.1
205,409 + MPMX26_00190 0.43 +0.5
205,409 + MPMX26_00190 0.43 +0.5
205,409 + MPMX26_00190 0.43 -0.1
205,409 + MPMX26_00190 0.43 -0.9
205,409 + MPMX26_00190 0.43 +1.3
205,409 + MPMX26_00190 0.43 -0.6
205,474 + MPMX26_00190 0.51 -0.2
205,491 + MPMX26_00190 0.53 +0.3
205,491 + MPMX26_00190 0.53 -0.0
205,491 + MPMX26_00190 0.53 +0.3
205,491 + MPMX26_00190 0.53 -0.2
205,491 + MPMX26_00190 0.53 +0.1
205,556 + MPMX26_00190 0.61 +0.4
205,690 + MPMX26_00190 0.76 +0.2
205,704 + MPMX26_00190 0.78 +0.2
205,707 + MPMX26_00190 0.78 +1.1
205,718 + MPMX26_00190 0.80 +1.8
205,728 + MPMX26_00190 0.81 +0.1
205,792 + MPMX26_00190 0.88 +0.1
205,885 + -1.3
205,898 + +0.5
205,898 + -1.1
205,898 + +0.1
205,898 + -0.8
205,919 + -1.4
205,919 + -0.1
205,927 + -0.9
205,929 + +0.3
205,929 + +0.6
205,929 + -0.8
205,929 + -0.2
205,929 + -0.8
205,929 + +1.0
205,942 + -1.1
205,960 + -0.1
205,960 + +0.9
205,965 + +0.1
205,971 + +0.2
205,984 + -0.6
205,984 + +0.2
205,984 + +0.0
206,079 + MPMX26_00191 0.15 +0.2
206,079 + MPMX26_00191 0.15 -0.9
206,079 + MPMX26_00191 0.15 -0.6
206,079 + MPMX26_00191 0.15 +1.1
206,079 + MPMX26_00191 0.15 -0.0
206,084 + MPMX26_00191 0.15 -1.6
206,108 + MPMX26_00191 0.17 +0.9
206,108 + MPMX26_00191 0.17 +0.9
206,108 + MPMX26_00191 0.17 +0.3
206,108 + MPMX26_00191 0.17 -0.0
206,116 - MPMX26_00191 0.18 +0.5
206,118 + MPMX26_00191 0.18 -1.1
206,118 + MPMX26_00191 0.18 +0.1
206,118 + MPMX26_00191 0.18 -0.3
206,118 + MPMX26_00191 0.18 +0.3
206,132 + MPMX26_00191 0.19 +0.8
206,169 + MPMX26_00191 0.23 +0.9
206,187 + MPMX26_00191 0.24 +0.5
206,187 + MPMX26_00191 0.24 +0.5
206,193 + MPMX26_00191 0.25 +0.3
206,242 + MPMX26_00191 0.29 +0.2
206,242 + MPMX26_00191 0.29 -0.2
206,242 + MPMX26_00191 0.29 +0.5
206,269 + MPMX26_00191 0.31 +0.3
206,269 + MPMX26_00191 0.31 +0.6
206,286 + MPMX26_00191 0.32 +0.2
206,311 + MPMX26_00191 0.34 -0.4
206,336 + MPMX26_00191 0.37 -1.3
206,351 + MPMX26_00191 0.38 -0.0
206,397 + MPMX26_00191 0.42 -0.3
206,430 + MPMX26_00191 0.44 -1.3
206,431 + MPMX26_00191 0.44 +0.2
206,444 + MPMX26_00191 0.46 -1.4
206,477 + MPMX26_00191 0.48 +0.8
206,487 + MPMX26_00191 0.49 -0.3
206,487 + MPMX26_00191 0.49 +0.8
206,515 + MPMX26_00191 0.52 +0.2
206,521 + MPMX26_00191 0.52 +1.1
206,587 + MPMX26_00191 0.58 +0.3
206,665 + MPMX26_00191 0.64 +0.5

Or see this region's nucleotide sequence