Strain Fitness in Escherichia fergusonii Becca around EFB2_04047

Experiment: BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)
4,256,149	+		EFB2_04045	0.80	-0.6
4,256,149	+		EFB2_04045	0.80	+0.5
4,256,149	+		EFB2_04045	0.80	-0.9
4,256,149	+		EFB2_04045	0.80	+0.7
4,256,149	+		EFB2_04045	0.80	+0.5
4,256,149	+		EFB2_04045	0.80	-0.9
4,256,149	+		EFB2_04045	0.80	-1.6
4,256,149	+		EFB2_04045	0.80	+0.6
4,256,149	+		EFB2_04045	0.80	-1.8
4,256,150	-		EFB2_04045	0.80	-3.8
4,256,150	-		EFB2_04045	0.80	-0.3
4,256,150	-		EFB2_04045	0.80	+1.1
4,256,150	-		EFB2_04045	0.80	-0.2
4,256,150	-		EFB2_04045	0.80	-0.8
4,256,150	-		EFB2_04045	0.80	+1.0
4,256,150	-		EFB2_04045	0.80	+1.4
4,256,150	-		EFB2_04045	0.80	-0.0
4,256,151	+		EFB2_04045	0.80	+0.4
4,256,151	+		EFB2_04045	0.80	+0.0
4,256,151	+		EFB2_04045	0.80	+2.5
4,256,151	+		EFB2_04045	0.80	+0.7
4,256,151	+		EFB2_04045	0.80	+1.1
4,256,151	+		EFB2_04045	0.80	+1.7
4,256,151	+		EFB2_04045	0.80	-0.4
4,256,151	+		EFB2_04045	0.80	+0.5
4,256,151	+		EFB2_04045	0.80	+1.3
4,256,151	+		EFB2_04045	0.80	-0.6
4,256,151	+		EFB2_04045	0.80	-3.2
4,256,151	+		EFB2_04045	0.80	+1.1
4,256,151	+		EFB2_04045	0.80	+1.7
4,256,151	+		EFB2_04045	0.80	+0.0
4,256,151	+		EFB2_04045	0.80	-2.1
4,256,151	+		EFB2_04045	0.80	-1.8
4,256,151	+		EFB2_04045	0.80	-3.0
4,256,151	+		EFB2_04045	0.80	-2.3
4,256,151	+		EFB2_04045	0.80	-0.4
4,256,151	+		EFB2_04045	0.80	-2.0
4,256,151	+		EFB2_04045	0.80	-1.0
4,256,151	+		EFB2_04045	0.80	+0.9
4,256,151	+		EFB2_04045	0.80	-0.4
4,256,151	+		EFB2_04045	0.80	-1.4
4,256,151	+		EFB2_04045	0.80	+0.5
4,256,151	+		EFB2_04045	0.80	-1.3
4,256,152	-		EFB2_04045	0.80	-0.1
4,256,152	-		EFB2_04045	0.80	-1.2
4,256,152	-		EFB2_04045	0.80	+0.8
4,256,152	-		EFB2_04045	0.80	+0.7
4,256,152	-		EFB2_04045	0.80	-1.9
4,256,152	-		EFB2_04045	0.80	-0.7
4,256,152	-		EFB2_04045	0.80	-0.1
4,256,152	-		EFB2_04045	0.80	+0.1
4,256,152	-		EFB2_04045	0.80	-2.8
4,256,152	-		EFB2_04045	0.80	-2.2
4,256,152	-		EFB2_04045	0.80	+1.0
4,256,152	-		EFB2_04045	0.80	+1.0
4,256,152	-		EFB2_04045	0.80	-1.7
4,256,152	-		EFB2_04045	0.80	+2.4
4,256,152	-		EFB2_04045	0.80	+0.7
4,256,152	-		EFB2_04045	0.80	+1.5
4,256,152	-		EFB2_04045	0.80	+0.0
4,256,152	-		EFB2_04045	0.80	-0.1
4,256,152	-		EFB2_04045	0.80	-3.1
4,256,152	-		EFB2_04045	0.80	+0.1
4,256,152	-		EFB2_04045	0.80	+0.3
4,256,152	-		EFB2_04045	0.80	+0.2
4,256,152	-		EFB2_04045	0.80	-0.4
4,256,152	-		EFB2_04045	0.80	+0.3
4,256,152	-		EFB2_04045	0.80	+1.3
4,256,152	-		EFB2_04045	0.80	-1.0
4,256,152	-		EFB2_04045	0.80	+0.8
4,256,152	-		EFB2_04045	0.80	-0.5
4,256,152	-		EFB2_04045	0.80	-2.5
4,256,152	-		EFB2_04045	0.80	-0.8
4,256,152	-		EFB2_04045	0.80	+0.4
4,256,152	-		EFB2_04045	0.80	+0.7
4,256,152	-		EFB2_04045	0.80	+0.0
4,256,160	+		EFB2_04045	0.80	-2.7
4,256,160	+		EFB2_04045	0.80	+0.6
4,256,160	+		EFB2_04045	0.80	-1.3
4,256,161	-		EFB2_04045	0.81	+1.3
4,256,161	-		EFB2_04045	0.81	+0.6
4,256,161	-		EFB2_04045	0.81	-1.1
4,256,161	-		EFB2_04045	0.81	-0.2
4,256,179	+		EFB2_04045	0.82	-1.3
4,256,179	+		EFB2_04045	0.82	-0.3
4,256,180	-		EFB2_04045	0.82	+1.4
4,256,216	+		EFB2_04045	0.84	-0.1
4,256,216	+		EFB2_04045	0.84	-3.1
4,256,216	+		EFB2_04045	0.84	+0.9
4,256,216	+		EFB2_04045	0.84	+0.8
4,256,216	+		EFB2_04045	0.84	+0.4
4,256,216	+		EFB2_04045	0.84	+0.3
4,256,216	+		EFB2_04045	0.84	+0.8
4,256,216	+		EFB2_04045	0.84	-1.6
4,256,217	-		EFB2_04045	0.84	-0.8
4,256,217	-		EFB2_04045	0.84	-0.5
4,256,217	-		EFB2_04045	0.84	-1.9
4,256,217	-		EFB2_04045	0.84	+1.8
4,256,217	-		EFB2_04045	0.84	+0.2
4,256,217	-		EFB2_04045	0.84	+0.4
4,256,217	-		EFB2_04045	0.84	-0.2
4,256,217	-		EFB2_04045	0.84	+0.2
4,256,217	-		EFB2_04045	0.84	-1.4
4,256,217	-		EFB2_04045	0.84	+0.0
4,256,217	-		EFB2_04045	0.84	-0.8
4,256,224	+		EFB2_04045	0.85	+0.3
4,256,225	-		EFB2_04045	0.85	-2.3
4,256,347	+				-2.6
4,256,406	+				+0.8
4,256,432	-				-0.3
4,256,438	+				-0.2
4,256,438	+				+1.1
4,256,439	-				-0.6
4,256,439	-				+1.1
4,256,439	-				+0.2
4,256,439	-				+0.0
4,256,439	-				+0.9
4,256,439	-				+0.1
4,256,454	+				-2.5
4,256,454	+				+0.8
4,256,454	+				-0.0
4,256,454	+				-0.2
4,256,454	+				+1.1
4,256,455	-				+0.1
4,256,455	-				-0.4
4,256,455	-				+0.3
4,256,455	-				+1.4
4,256,455	-				+0.8
4,256,456	+				-1.9
4,256,456	+				+0.2
4,256,456	+				-0.9
4,256,457	-				+1.7
4,256,457	-				+2.0
4,256,457	-				+1.8
4,256,475	+				+1.1
4,256,475	+				-1.8
4,256,475	+				+0.7
4,256,476	-				+1.1
4,256,476	-				+0.8
4,256,476	-				-1.2
4,256,476	-				+1.5
4,256,476	-				-0.3
4,256,478	+				+1.5
4,256,478	+				+1.0
4,256,479	-				+2.0
4,256,479	-				+0.3
4,256,479	-				-0.1
4,256,529	+		EFB2_04046	0.13	+0.2
4,256,529	+		EFB2_04046	0.13	+0.3
4,256,529	+		EFB2_04046	0.13	-1.3
4,256,530	-		EFB2_04046	0.13	+0.7
4,256,530	-		EFB2_04046	0.13	-0.7
4,256,530	-		EFB2_04046	0.13	+0.7
4,256,555	+		EFB2_04046	0.17	+0.5
4,256,555	+		EFB2_04046	0.17	+0.4
4,256,555	+		EFB2_04046	0.17	-1.6
4,256,555	+		EFB2_04046	0.17	+0.9
4,256,555	+		EFB2_04046	0.17	-2.0
4,256,555	+		EFB2_04046	0.17	+0.5
4,256,555	+		EFB2_04046	0.17	+1.0
4,256,555	+		EFB2_04046	0.17	+0.0
4,256,556	-		EFB2_04046	0.17	+1.4
4,256,556	-		EFB2_04046	0.17	-0.1
4,256,556	-		EFB2_04046	0.17	-1.1
4,256,556	-		EFB2_04046	0.17	+0.6
4,256,556	-		EFB2_04046	0.17	-1.5
4,256,556	-		EFB2_04046	0.17	+0.2
4,256,630	-		EFB2_04046	0.28	-0.9
4,256,630	-		EFB2_04046	0.28	+0.8
4,256,644	+		EFB2_04046	0.30	-0.5
4,256,645	-		EFB2_04046	0.30	+0.6
4,256,645	-		EFB2_04046	0.30	-0.1
4,256,654	+		EFB2_04046	0.31	-0.5
4,256,654	+		EFB2_04046	0.31	-0.6
4,256,668	+		EFB2_04046	0.33	-0.8
4,256,668	+		EFB2_04046	0.33	+0.1
4,256,727	+		EFB2_04046	0.42	-1.7
4,256,727	+		EFB2_04046	0.42	+0.6
4,256,728	-		EFB2_04046	0.42	+0.0
4,256,773	+		EFB2_04046	0.49	+1.4
4,256,773	+		EFB2_04046	0.49	+0.2
4,256,774	-		EFB2_04046	0.49	+1.7
4,256,774	-		EFB2_04046	0.49	-0.8
4,256,774	-		EFB2_04046	0.49	-1.1
4,256,825	+		EFB2_04046	0.56	-1.4
4,256,825	+		EFB2_04046	0.56	-0.6
4,256,825	+		EFB2_04046	0.56	-0.0
4,256,825	+		EFB2_04046	0.56	-0.9
4,256,825	+		EFB2_04046	0.56	-0.0
4,256,826	-		EFB2_04046	0.56	+0.6
4,256,826	-		EFB2_04046	0.56	-2.2
4,256,826	-		EFB2_04046	0.56	-0.3
4,256,826	-		EFB2_04046	0.56	-2.6
4,256,826	-		EFB2_04046	0.56	-0.3
4,256,826	-		EFB2_04046	0.56	-0.8
4,256,893	+		EFB2_04046	0.66	-3.8
4,256,893	+		EFB2_04046	0.66	-1.0
4,256,893	+		EFB2_04046	0.66	+0.4
4,256,893	+		EFB2_04046	0.66	+0.5
4,256,893	+		EFB2_04046	0.66	-1.4
4,256,893	+		EFB2_04046	0.66	-3.4
4,256,894	-		EFB2_04046	0.66	+1.4
4,256,894	-		EFB2_04046	0.66	+1.9
4,256,894	-		EFB2_04046	0.66	+2.1
4,256,894	-		EFB2_04046	0.66	+0.4
4,256,894	-		EFB2_04046	0.66	+0.2
4,256,894	-		EFB2_04046	0.66	-2.8
4,256,894	-		EFB2_04046	0.66	+0.2
4,256,900	-		EFB2_04046	0.67	+0.7
4,256,921	-		EFB2_04046	0.70	-1.0
4,256,921	-		EFB2_04046	0.70	+0.0
4,256,921	-		EFB2_04046	0.70	-3.3
4,256,949	+		EFB2_04046	0.74	+1.5
4,256,949	+		EFB2_04046	0.74	-3.7
4,256,950	-		EFB2_04046	0.74	+1.0
4,257,065	+				-1.4
4,257,065	+				-0.0
4,257,065	+				+0.4
4,257,065	+				+0.1
4,257,065	+				-2.4
4,257,065	+				+1.2
4,257,065	+				+0.0
4,257,065	+				-1.0
4,257,066	-				-0.9
4,257,066	-				-0.2
4,257,066	-				-0.7
4,257,066	-				-2.8
4,257,066	-				-1.2
4,257,066	-				+0.9
4,257,066	-				-0.9
4,257,066	-				+0.8
4,257,066	-				+0.6
4,257,066	-				+0.4
4,257,066	-				-0.2
4,257,066	-				+0.4
4,257,104	-				+0.8
4,257,104	-				-3.6
4,257,126	+				-0.7
4,257,126	+				+0.5
4,257,126	+				+0.6
4,257,126	+				-1.4
4,257,126	+				-0.4
4,257,127	-				-0.0
4,257,127	-				+1.1
4,257,127	-				-0.4
4,257,127	-				+0.6
4,257,127	-				+0.2
4,257,140	+				+0.8
4,257,140	+				-1.6
4,257,141	-				+0.9
4,257,196	+		EFB2_04047	0.12	-0.2
4,257,196	+		EFB2_04047	0.12	-0.9
4,257,196	+		EFB2_04047	0.12	-0.7
4,257,196	+		EFB2_04047	0.12	-1.1
4,257,197	-		EFB2_04047	0.12	+1.2
4,257,197	-		EFB2_04047	0.12	+1.3
4,257,212	+		EFB2_04047	0.15	-2.2
4,257,212	+		EFB2_04047	0.15	+1.2
4,257,212	+		EFB2_04047	0.15	+0.5
4,257,212	+		EFB2_04047	0.15	+0.3
4,257,213	-		EFB2_04047	0.16	+0.8
4,257,213	-		EFB2_04047	0.16	+0.5
4,257,213	-		EFB2_04047	0.16	-3.0
4,257,213	-		EFB2_04047	0.16	+0.7
4,257,213	-		EFB2_04047	0.16	+0.9
4,257,240	+		EFB2_04047	0.21	+0.1
4,257,241	-		EFB2_04047	0.22	+0.1
4,257,248	+		EFB2_04047	0.23	+2.4
4,257,248	+		EFB2_04047	0.23	+0.3
4,257,249	-		EFB2_04047	0.23	-0.4
4,257,273	+		EFB2_04047	0.28	+0.1
4,257,273	+		EFB2_04047	0.28	+1.5
4,257,273	+		EFB2_04047	0.28	+0.7
4,257,273	+		EFB2_04047	0.28	-2.7
4,257,274	-		EFB2_04047	0.28	-0.5
4,257,274	-		EFB2_04047	0.28	+0.1
4,257,274	-		EFB2_04047	0.28	-0.3
4,257,274	-		EFB2_04047	0.28	+0.9
4,257,274	-		EFB2_04047	0.28	-2.2
4,257,274	-		EFB2_04047	0.28	+0.9
4,257,274	-		EFB2_04047	0.28	+0.7
4,257,301	+		EFB2_04047	0.34	-1.0
4,257,302	-		EFB2_04047	0.34	-1.9
4,257,302	-		EFB2_04047	0.34	+0.6
4,257,304	+		EFB2_04047	0.35	+0.6
4,257,304	+		EFB2_04047	0.35	-2.1
4,257,304	+		EFB2_04047	0.35	-0.8
4,257,304	+		EFB2_04047	0.35	+1.1
4,257,304	+		EFB2_04047	0.35	-0.4
4,257,304	+		EFB2_04047	0.35	-1.0
4,257,304	+		EFB2_04047	0.35	-0.3
4,257,305	-		EFB2_04047	0.35	-0.4
4,257,305	-		EFB2_04047	0.35	-2.9
4,257,305	-		EFB2_04047	0.35	-0.5
4,257,305	-		EFB2_04047	0.35	+0.3
4,257,305	-		EFB2_04047	0.35	+1.6
4,257,305	-		EFB2_04047	0.35	-0.1
4,257,305	-		EFB2_04047	0.35	-0.3
4,257,305	-		EFB2_04047	0.35	+1.5
4,257,331	-		EFB2_04047	0.41	-0.2
4,257,333	+		EFB2_04047	0.41	-0.7
4,257,333	+		EFB2_04047	0.41	+2.1
4,257,333	+		EFB2_04047	0.41	+0.3
4,257,390	+		EFB2_04047	0.53	+0.2
4,257,390	+		EFB2_04047	0.53	-0.1
4,257,390	+		EFB2_04047	0.53	+0.3
4,257,390	+		EFB2_04047	0.53	+0.3
4,257,390	+		EFB2_04047	0.53	+0.8
4,257,391	-		EFB2_04047	0.53	-1.8
4,257,391	-		EFB2_04047	0.53	+1.3
4,257,417	+		EFB2_04047	0.59	+0.0
4,257,417	+		EFB2_04047	0.59	+0.8
4,257,417	+		EFB2_04047	0.59	+0.2
4,257,418	-		EFB2_04047	0.59	-0.7
4,257,418	-		EFB2_04047	0.59	+0.2
4,257,418	-		EFB2_04047	0.59	+1.4
4,257,418	-		EFB2_04047	0.59	-1.1
4,257,418	-		EFB2_04047	0.59	+0.7
4,257,418	-		EFB2_04047	0.59	+0.9
4,257,418	-		EFB2_04047	0.59	+0.4
4,257,418	-		EFB2_04047	0.59	+0.6
4,257,420	+		EFB2_04047	0.59	+0.5
4,257,420	+		EFB2_04047	0.59	+2.5
4,257,420	+		EFB2_04047	0.59	-0.9
4,257,420	+		EFB2_04047	0.59	+0.9
4,257,420	+		EFB2_04047	0.59	+0.0
4,257,420	+		EFB2_04047	0.59	+0.7
4,257,421	-		EFB2_04047	0.59	+2.1
4,257,446	+		EFB2_04047	0.65	-1.6
4,257,446	+		EFB2_04047	0.65	+0.8
4,257,446	+		EFB2_04047	0.65	-0.7
4,257,447	-		EFB2_04047	0.65	+0.9
4,257,447	-		EFB2_04047	0.65	-0.0
4,257,447	-		EFB2_04047	0.65	+0.3
4,257,447	-		EFB2_04047	0.65	+0.9
4,257,519	+		EFB2_04047	0.80	-0.9
4,257,520	-		EFB2_04047	0.80	-0.6
4,257,520	-		EFB2_04047	0.80	-1.9
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