Experiment: BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EFB2_00941 and EFB2_00942 are separated by 160 nucleotides EFB2_00942 and EFB2_00943 overlap by 1 nucleotides EFB2_00943 and EFB2_00944 are separated by 183 nucleotides
EFB2_00941: EFB2_00941 - Adenine DNA glycosylase, at 968,946 to 969,998
_00941
EFB2_00942: EFB2_00942 - tRNA (guanine-N(7)-)-methyltransferase, at 970,159 to 970,878
_00942
EFB2_00943: EFB2_00943 - hypothetical protein, at 970,878 to 971,204
_00943
EFB2_00944: EFB2_00944 - hypothetical protein, at 971,388 to 972,107
_00944
Position (kb) 970
971 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 969.223 kb on + strand, within EFB2_00941 at 969.223 kb on + strand, within EFB2_00941 at 969.223 kb on + strand, within EFB2_00941 at 969.223 kb on + strand, within EFB2_00941 at 969.224 kb on - strand, within EFB2_00941 at 969.225 kb on + strand, within EFB2_00941 at 969.225 kb on + strand, within EFB2_00941 at 969.225 kb on + strand, within EFB2_00941 at 969.225 kb on + strand, within EFB2_00941 at 969.225 kb on + strand, within EFB2_00941 at 969.225 kb on + strand, within EFB2_00941 at 969.225 kb on + strand, within EFB2_00941 at 969.226 kb on - strand, within EFB2_00941 at 969.226 kb on - strand, within EFB2_00941 at 969.226 kb on - strand, within EFB2_00941 at 969.226 kb on - strand, within EFB2_00941 at 969.226 kb on - strand, within EFB2_00941 at 969.267 kb on + strand, within EFB2_00941 at 969.267 kb on + strand, within EFB2_00941 at 969.267 kb on + strand, within EFB2_00941 at 969.267 kb on + strand, within EFB2_00941 at 969.267 kb on + strand, within EFB2_00941 at 969.267 kb on + strand, within EFB2_00941 at 969.267 kb on + strand, within EFB2_00941 at 969.267 kb on + strand, within EFB2_00941 at 969.267 kb on + strand, within EFB2_00941 at 969.267 kb on + strand, within EFB2_00941 at 969.267 kb on + strand, within EFB2_00941 at 969.268 kb on - strand, within EFB2_00941 at 969.268 kb on - strand, within EFB2_00941 at 969.268 kb on - strand, within EFB2_00941 at 969.268 kb on - strand, within EFB2_00941 at 969.268 kb on - strand, within EFB2_00941 at 969.268 kb on - strand, within EFB2_00941 at 969.268 kb on - strand, within EFB2_00941 at 969.268 kb on - strand, within EFB2_00941 at 969.268 kb on - strand, within EFB2_00941 at 969.285 kb on + strand, within EFB2_00941 at 969.285 kb on + strand, within EFB2_00941 at 969.286 kb on - strand, within EFB2_00941 at 969.343 kb on + strand, within EFB2_00941 at 969.344 kb on - strand, within EFB2_00941 at 969.356 kb on + strand, within EFB2_00941 at 969.356 kb on + strand, within EFB2_00941 at 969.356 kb on + strand, within EFB2_00941 at 969.356 kb on + strand, within EFB2_00941 at 969.356 kb on + strand, within EFB2_00941 at 969.356 kb on + strand, within EFB2_00941 at 969.356 kb on + strand, within EFB2_00941 at 969.356 kb on + strand, within EFB2_00941 at 969.356 kb on + strand, within EFB2_00941 at 969.356 kb on + strand, within EFB2_00941 at 969.356 kb on + strand, within EFB2_00941 at 969.356 kb on + strand, within EFB2_00941 at 969.356 kb on + strand, within EFB2_00941 at 969.357 kb on - strand, within EFB2_00941 at 969.357 kb on - strand, within EFB2_00941 at 969.357 kb on - strand, within EFB2_00941 at 969.357 kb on - strand, within EFB2_00941 at 969.357 kb on - strand, within EFB2_00941 at 969.357 kb on - strand, within EFB2_00941 at 969.357 kb on - strand, within EFB2_00941 at 969.357 kb on - strand, within EFB2_00941 at 969.357 kb on - strand, within EFB2_00941 at 969.357 kb on - strand, within EFB2_00941 at 969.374 kb on + strand, within EFB2_00941 at 969.374 kb on + strand, within EFB2_00941 at 969.374 kb on + strand, within EFB2_00941 at 969.374 kb on + strand, within EFB2_00941 at 969.374 kb on + strand, within EFB2_00941 at 969.374 kb on + strand, within EFB2_00941 at 969.374 kb on + strand, within EFB2_00941 at 969.374 kb on + strand, within EFB2_00941 at 969.374 kb on + strand, within EFB2_00941 at 969.374 kb on + strand, within EFB2_00941 at 969.374 kb on + strand, within EFB2_00941 at 969.374 kb on + strand, within EFB2_00941 at 969.374 kb on + strand, within EFB2_00941 at 969.374 kb on + strand, within EFB2_00941 at 969.374 kb on + strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.375 kb on - strand, within EFB2_00941 at 969.413 kb on + strand, within EFB2_00941 at 969.413 kb on + strand, within EFB2_00941 at 969.413 kb on + strand, within EFB2_00941 at 969.413 kb on + strand, within EFB2_00941 at 969.414 kb on - strand, within EFB2_00941 at 969.414 kb on - strand, within EFB2_00941 at 969.422 kb on + strand, within EFB2_00941 at 969.459 kb on - strand, within EFB2_00941 at 969.459 kb on - strand, within EFB2_00941 at 969.507 kb on + strand, within EFB2_00941 at 969.507 kb on + strand, within EFB2_00941 at 969.507 kb on + strand, within EFB2_00941 at 969.507 kb on + strand, within EFB2_00941 at 969.508 kb on - strand, within EFB2_00941 at 969.508 kb on - strand, within EFB2_00941 at 969.508 kb on - strand, within EFB2_00941 at 969.508 kb on - strand, within EFB2_00941 at 969.508 kb on - strand, within EFB2_00941 at 969.508 kb on - strand, within EFB2_00941 at 969.508 kb on - strand, within EFB2_00941 at 969.508 kb on - strand, within EFB2_00941 at 969.508 kb on - strand, within EFB2_00941 at 969.508 kb on - strand, within EFB2_00941 at 969.508 kb on - strand, within EFB2_00941 at 969.512 kb on + strand, within EFB2_00941 at 969.512 kb on + strand, within EFB2_00941 at 969.513 kb on - strand, within EFB2_00941 at 969.546 kb on + strand, within EFB2_00941 at 969.546 kb on + strand, within EFB2_00941 at 969.546 kb on + strand, within EFB2_00941 at 969.547 kb on - strand, within EFB2_00941 at 969.547 kb on - strand, within EFB2_00941 at 969.547 kb on - strand, within EFB2_00941 at 969.547 kb on - strand, within EFB2_00941 at 969.553 kb on + strand, within EFB2_00941 at 969.553 kb on + strand, within EFB2_00941 at 969.553 kb on + strand, within EFB2_00941 at 969.553 kb on + strand, within EFB2_00941 at 969.553 kb on + strand, within EFB2_00941 at 969.553 kb on + strand, within EFB2_00941 at 969.553 kb on + strand, within EFB2_00941 at 969.554 kb on - strand, within EFB2_00941 at 969.554 kb on - strand, within EFB2_00941 at 969.554 kb on - strand, within EFB2_00941 at 969.554 kb on - strand, within EFB2_00941 at 969.554 kb on - strand, within EFB2_00941 at 969.554 kb on - strand, within EFB2_00941 at 969.554 kb on - strand, within EFB2_00941 at 969.554 kb on - strand, within EFB2_00941 at 969.692 kb on + strand, within EFB2_00941 at 969.702 kb on + strand, within EFB2_00941 at 969.702 kb on + strand, within EFB2_00941 at 969.703 kb on - strand, within EFB2_00941 at 969.703 kb on - strand, within EFB2_00941 at 969.703 kb on - strand, within EFB2_00941 at 969.703 kb on - strand, within EFB2_00941 at 969.703 kb on - strand, within EFB2_00941 at 969.728 kb on + strand, within EFB2_00941 at 969.728 kb on + strand, within EFB2_00941 at 969.729 kb on - strand, within EFB2_00941 at 969.729 kb on - strand, within EFB2_00941 at 969.732 kb on + strand, within EFB2_00941 at 969.732 kb on + strand, within EFB2_00941 at 969.732 kb on + strand, within EFB2_00941 at 969.732 kb on + strand, within EFB2_00941 at 969.732 kb on + strand, within EFB2_00941 at 969.732 kb on + strand, within EFB2_00941 at 969.732 kb on + strand, within EFB2_00941 at 969.732 kb on + strand, within EFB2_00941 at 969.733 kb on - strand, within EFB2_00941 at 969.733 kb on - strand, within EFB2_00941 at 969.733 kb on - strand, within EFB2_00941 at 969.733 kb on - strand, within EFB2_00941 at 969.733 kb on - strand, within EFB2_00941 at 969.733 kb on - strand, within EFB2_00941 at 969.733 kb on - strand, within EFB2_00941 at 969.733 kb on - strand, within EFB2_00941 at 969.733 kb on - strand, within EFB2_00941 at 969.733 kb on - strand, within EFB2_00941 at 969.733 kb on - strand, within EFB2_00941 at 969.733 kb on - strand, within EFB2_00941 at 969.733 kb on - strand, within EFB2_00941 at 969.733 kb on - strand, within EFB2_00941 at 969.733 kb on - strand, within EFB2_00941 at 969.751 kb on + strand, within EFB2_00941 at 969.752 kb on - strand, within EFB2_00941 at 969.752 kb on - strand, within EFB2_00941 at 969.752 kb on - strand, within EFB2_00941 at 969.752 kb on - strand, within EFB2_00941 at 969.752 kb on - strand, within EFB2_00941 at 969.754 kb on + strand, within EFB2_00941 at 969.755 kb on - strand, within EFB2_00941 at 969.834 kb on - strand, within EFB2_00941 at 969.847 kb on + strand, within EFB2_00941 at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.900 kb on + strand at 969.901 kb on - strand at 969.901 kb on - strand at 969.901 kb on - strand at 969.901 kb on - strand at 969.901 kb on - strand at 969.901 kb on - strand at 969.901 kb on - strand at 969.901 kb on - strand at 969.901 kb on - strand at 969.901 kb on - strand at 969.901 kb on - strand at 969.901 kb on - strand at 969.901 kb on - strand at 969.907 kb on + strand at 969.907 kb on + strand at 969.949 kb on + strand at 969.949 kb on + strand at 969.950 kb on - strand at 969.950 kb on - strand at 969.950 kb on - strand at 969.950 kb on - strand at 969.950 kb on - strand at 969.953 kb on + strand at 969.953 kb on + strand at 969.954 kb on - strand at 969.954 kb on - strand at 969.954 kb on - strand at 969.958 kb on + strand at 969.958 kb on + strand at 969.958 kb on + strand at 969.958 kb on + strand at 969.959 kb on - strand at 970.055 kb on + strand at 970.056 kb on - strand at 970.056 kb on - strand at 970.056 kb on - strand at 970.056 kb on - strand at 970.056 kb on - strand at 970.084 kb on + strand at 970.084 kb on + strand at 970.084 kb on + strand at 970.085 kb on - strand at 970.085 kb on - strand at 970.085 kb on - strand at 970.085 kb on - strand at 970.085 kb on - strand at 970.085 kb on - strand at 970.094 kb on - strand at 970.106 kb on + strand at 970.106 kb on + strand at 970.106 kb on + strand at 970.106 kb on + strand at 970.106 kb on + strand at 970.106 kb on + strand at 970.107 kb on - strand at 970.107 kb on - strand at 970.107 kb on - strand at 970.107 kb on - strand at 970.107 kb on - strand at 970.107 kb on - strand at 970.107 kb on - strand at 970.107 kb on - strand at 970.107 kb on - strand at 970.107 kb on - strand at 970.107 kb on - strand at 970.107 kb on - strand at 970.117 kb on - strand at 970.150 kb on + strand at 970.151 kb on - strand at 970.221 kb on + strand at 970.221 kb on + strand at 970.221 kb on + strand at 970.222 kb on - strand at 970.279 kb on + strand, within EFB2_00942 at 970.279 kb on + strand, within EFB2_00942 at 970.280 kb on - strand, within EFB2_00942 at 970.280 kb on - strand, within EFB2_00942 at 970.314 kb on + strand, within EFB2_00942 at 970.314 kb on + strand, within EFB2_00942 at 970.314 kb on + strand, within EFB2_00942 at 970.314 kb on + strand, within EFB2_00942 at 970.314 kb on + strand, within EFB2_00942 at 970.314 kb on + strand, within EFB2_00942 at 970.314 kb on + strand, within EFB2_00942 at 970.314 kb on + strand, within EFB2_00942 at 970.314 kb on + strand, within EFB2_00942 at 970.314 kb on + strand, within EFB2_00942 at 970.314 kb on + strand, within EFB2_00942 at 970.314 kb on + strand, within EFB2_00942 at 970.314 kb on + strand, within EFB2_00942 at 970.315 kb on - strand, within EFB2_00942 at 970.315 kb on - strand, within EFB2_00942 at 970.315 kb on - strand, within EFB2_00942 at 970.315 kb on - strand, within EFB2_00942 at 970.315 kb on - strand, within EFB2_00942 at 970.315 kb on - strand, within EFB2_00942 at 970.315 kb on - strand, within EFB2_00942 at 970.404 kb on + strand, within EFB2_00942 at 970.404 kb on + strand, within EFB2_00942 at 970.493 kb on + strand, within EFB2_00942 at 970.493 kb on + strand, within EFB2_00942 at 970.493 kb on + strand, within EFB2_00942 at 970.493 kb on + strand, within EFB2_00942 at 970.494 kb on - strand, within EFB2_00942 at 970.494 kb on - strand, within EFB2_00942 at 970.494 kb on - strand, within EFB2_00942 at 970.494 kb on - strand, within EFB2_00942 at 970.494 kb on - strand, within EFB2_00942 at 970.539 kb on + strand, within EFB2_00942 at 970.539 kb on + strand, within EFB2_00942 at 970.539 kb on + strand, within EFB2_00942 at 970.540 kb on - strand, within EFB2_00942 at 970.540 kb on - strand, within EFB2_00942 at 970.540 kb on - strand, within EFB2_00942 at 970.540 kb on - strand, within EFB2_00942 at 970.540 kb on - strand, within EFB2_00942 at 970.540 kb on - strand, within EFB2_00942 at 970.540 kb on - strand, within EFB2_00942 at 970.611 kb on + strand, within EFB2_00942 at 970.612 kb on - strand, within EFB2_00942 at 970.612 kb on - strand, within EFB2_00942 at 970.612 kb on - strand, within EFB2_00942 at 970.614 kb on + strand, within EFB2_00942 at 970.615 kb on - strand, within EFB2_00942 at 970.615 kb on - strand, within EFB2_00942 at 970.615 kb on - strand, within EFB2_00942 at 970.615 kb on - strand, within EFB2_00942 at 970.615 kb on - strand, within EFB2_00942 at 970.652 kb on + strand, within EFB2_00942 at 970.652 kb on + strand, within EFB2_00942 at 970.653 kb on - strand, within EFB2_00942 at 970.679 kb on + strand, within EFB2_00942 at 970.679 kb on + strand, within EFB2_00942 at 970.679 kb on + strand, within EFB2_00942 at 970.679 kb on + strand, within EFB2_00942 at 970.680 kb on - strand, within EFB2_00942 at 970.680 kb on - strand, within EFB2_00942 at 970.680 kb on - strand, within EFB2_00942 at 970.686 kb on + strand, within EFB2_00942 at 970.687 kb on - strand, within EFB2_00942 at 970.687 kb on - strand, within EFB2_00942 at 970.708 kb on + strand, within EFB2_00942 at 970.709 kb on - strand, within EFB2_00942 at 970.709 kb on - strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.719 kb on + strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.720 kb on - strand, within EFB2_00942 at 970.740 kb on + strand, within EFB2_00942 at 970.740 kb on + strand, within EFB2_00942 at 970.740 kb on + strand, within EFB2_00942 at 970.740 kb on + strand, within EFB2_00942 at 970.740 kb on + strand, within EFB2_00942 at 970.740 kb on + strand, within EFB2_00942 at 970.740 kb on + strand, within EFB2_00942 at 970.740 kb on + strand, within EFB2_00942 at 970.741 kb on - strand, within EFB2_00942 at 970.741 kb on - strand, within EFB2_00942 at 970.741 kb on - strand, within EFB2_00942 at 970.741 kb on - strand, within EFB2_00942 at 970.752 kb on + strand, within EFB2_00942 at 970.777 kb on + strand, within EFB2_00942 at 970.777 kb on + strand, within EFB2_00942 at 970.777 kb on + strand, within EFB2_00942 at 970.777 kb on + strand, within EFB2_00942 at 970.777 kb on + strand, within EFB2_00942 at 970.777 kb on + strand, within EFB2_00942 at 970.777 kb on + strand, within EFB2_00942 at 970.777 kb on + strand, within EFB2_00942 at 970.777 kb on + strand, within EFB2_00942 at 970.777 kb on + strand, within EFB2_00942 at 970.778 kb on - strand, within EFB2_00942 at 970.778 kb on - strand, within EFB2_00942 at 970.778 kb on - strand, within EFB2_00942 at 970.778 kb on - strand, within EFB2_00942 at 970.778 kb on - strand, within EFB2_00942 at 970.778 kb on - strand, within EFB2_00942 at 970.778 kb on - strand, within EFB2_00942 at 970.778 kb on - strand, within EFB2_00942 at 970.778 kb on - strand, within EFB2_00942 at 970.778 kb on - strand, within EFB2_00942 at 970.781 kb on + strand, within EFB2_00942 at 970.781 kb on + strand, within EFB2_00942 at 970.847 kb on + strand at 970.847 kb on + strand at 970.847 kb on + strand at 970.848 kb on - strand at 970.848 kb on - strand at 970.856 kb on + strand at 970.856 kb on + strand at 970.856 kb on + strand at 970.856 kb on + strand at 970.856 kb on + strand at 970.856 kb on + strand at 970.856 kb on + strand at 970.856 kb on + strand at 970.856 kb on + strand at 970.856 kb on + strand at 970.856 kb on + strand at 970.856 kb on + strand at 970.856 kb on + strand at 970.856 kb on + strand at 970.856 kb on + strand at 970.856 kb on + strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.857 kb on - strand at 970.876 kb on + strand at 970.877 kb on - strand at 970.877 kb on - strand at 970.973 kb on + strand, within EFB2_00943 at 970.973 kb on + strand, within EFB2_00943 at 970.973 kb on + strand, within EFB2_00943 at 970.973 kb on + strand, within EFB2_00943 at 970.973 kb on + strand, within EFB2_00943 at 970.973 kb on + strand, within EFB2_00943 at 970.973 kb on + strand, within EFB2_00943 at 970.974 kb on - strand, within EFB2_00943 at 970.974 kb on - strand, within EFB2_00943 at 970.974 kb on - strand, within EFB2_00943 at 970.974 kb on - strand, within EFB2_00943 at 970.974 kb on - strand, within EFB2_00943 at 970.974 kb on - strand, within EFB2_00943 at 970.974 kb on - strand, within EFB2_00943 at 970.974 kb on - strand, within EFB2_00943 at 970.974 kb on - strand, within EFB2_00943 at 970.974 kb on - strand, within EFB2_00943 at 970.974 kb on - strand, within EFB2_00943 at 970.974 kb on - strand, within EFB2_00943 at 970.974 kb on - strand, within EFB2_00943 at 970.974 kb on - strand, within EFB2_00943 at 970.994 kb on + strand, within EFB2_00943 at 970.994 kb on + strand, within EFB2_00943 at 970.994 kb on + strand, within EFB2_00943 at 970.994 kb on + strand, within EFB2_00943 at 970.994 kb on + strand, within EFB2_00943 at 970.995 kb on - strand, within EFB2_00943 at 970.995 kb on - strand, within EFB2_00943 at 970.995 kb on - strand, within EFB2_00943 at 971.012 kb on + strand, within EFB2_00943 at 971.012 kb on + strand, within EFB2_00943 at 971.012 kb on + strand, within EFB2_00943 at 971.012 kb on + strand, within EFB2_00943 at 971.012 kb on + strand, within EFB2_00943 at 971.012 kb on + strand, within EFB2_00943 at 971.012 kb on + strand, within EFB2_00943 at 971.015 kb on + strand, within EFB2_00943 at 971.061 kb on + strand, within EFB2_00943 at 971.061 kb on + strand, within EFB2_00943 at 971.135 kb on + strand, within EFB2_00943 at 971.135 kb on + strand, within EFB2_00943 at 971.135 kb on + strand, within EFB2_00943 at 971.135 kb on + strand, within EFB2_00943 at 971.135 kb on + strand, within EFB2_00943 at 971.135 kb on + strand, within EFB2_00943 at 971.135 kb on + strand, within EFB2_00943 at 971.135 kb on + strand, within EFB2_00943 at 971.135 kb on + strand, within EFB2_00943 at 971.135 kb on + strand, within EFB2_00943 at 971.135 kb on + strand, within EFB2_00943 at 971.136 kb on - strand, within EFB2_00943 at 971.136 kb on - strand, within EFB2_00943 at 971.136 kb on - strand, within EFB2_00943 at 971.167 kb on + strand, within EFB2_00943 at 971.167 kb on + strand, within EFB2_00943 at 971.167 kb on + strand, within EFB2_00943 at 971.167 kb on + strand, within EFB2_00943 at 971.167 kb on + strand, within EFB2_00943 at 971.167 kb on + strand, within EFB2_00943 at 971.167 kb on + strand, within EFB2_00943 at 971.168 kb on - strand, within EFB2_00943 at 971.168 kb on - strand, within EFB2_00943 at 971.168 kb on - strand, within EFB2_00943 at 971.168 kb on - strand, within EFB2_00943 at 971.168 kb on - strand, within EFB2_00943 at 971.203 kb on - strand at 971.203 kb on - strand at 971.203 kb on - strand at 971.203 kb on - strand at 971.203 kb on - strand at 971.203 kb on - strand at 971.203 kb on - strand at 971.212 kb on + strand at 971.213 kb on - strand at 971.213 kb on - strand at 971.248 kb on + strand at 971.248 kb on + strand at 971.249 kb on - strand at 971.249 kb on - strand at 971.249 kb on - strand at 971.249 kb on - strand at 971.249 kb on - strand at 971.254 kb on + strand at 971.254 kb on + strand at 971.255 kb on - strand at 971.263 kb on + strand at 971.263 kb on + strand at 971.283 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.387 kb on + strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.388 kb on - strand at 971.451 kb on + strand at 971.451 kb on + strand at 971.451 kb on + strand at 971.452 kb on - strand at 971.452 kb on - strand at 971.452 kb on - strand at 971.452 kb on - strand at 971.452 kb on - strand at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.559 kb on + strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.560 kb on - strand, within EFB2_00944 at 971.561 kb on + strand, within EFB2_00944 at 971.561 kb on + strand, within EFB2_00944 at 971.561 kb on + strand, within EFB2_00944 at 971.562 kb on - strand, within EFB2_00944 at 971.562 kb on - strand, within EFB2_00944 at 971.562 kb on - strand, within EFB2_00944 at 971.562 kb on - strand, within EFB2_00944 at 971.567 kb on + strand, within EFB2_00944 at 971.574 kb on + strand, within EFB2_00944 at 971.574 kb on + strand, within EFB2_00944 at 971.574 kb on + strand, within EFB2_00944 at 971.574 kb on + strand, within EFB2_00944 at 971.574 kb on + strand, within EFB2_00944 at 971.575 kb on - strand, within EFB2_00944 at 971.575 kb on - strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.626 kb on + strand, within EFB2_00944 at 971.627 kb on - strand, within EFB2_00944 at 971.627 kb on - strand, within EFB2_00944 at 971.627 kb on - strand, within EFB2_00944 at 971.627 kb on - strand, within EFB2_00944 at 971.627 kb on - strand, within EFB2_00944 at 971.627 kb on - strand, within EFB2_00944 at 971.627 kb on - strand, within EFB2_00944 at 971.627 kb on - strand, within EFB2_00944 at 971.627 kb on - strand, within EFB2_00944 at 971.627 kb on - strand, within EFB2_00944 at 971.627 kb on - strand, within EFB2_00944 at 971.627 kb on - strand, within EFB2_00944 at 971.627 kb on - strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.630 kb on + strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.631 kb on - strand, within EFB2_00944 at 971.702 kb on + strand, within EFB2_00944 at 971.702 kb on + strand, within EFB2_00944 at 971.703 kb on - strand, within EFB2_00944 at 971.823 kb on + strand, within EFB2_00944 at 971.823 kb on + strand, within EFB2_00944 at 971.823 kb on + strand, within EFB2_00944 at 971.823 kb on + strand, within EFB2_00944 at 971.823 kb on + strand, within EFB2_00944 at 971.823 kb on + strand, within EFB2_00944 at 971.824 kb on - strand, within EFB2_00944 at 971.824 kb on - strand, within EFB2_00944 at 971.825 kb on + strand, within EFB2_00944 at 971.825 kb on + strand, within EFB2_00944 at 971.825 kb on + strand, within EFB2_00944 at 971.825 kb on + strand, within EFB2_00944 at 971.825 kb on + strand, within EFB2_00944 at 971.825 kb on + strand, within EFB2_00944 at 971.825 kb on + strand, within EFB2_00944 at 971.825 kb on + strand, within EFB2_00944 at 971.826 kb on - strand, within EFB2_00944 at 971.826 kb on - strand, within EFB2_00944 at 971.826 kb on - strand, within EFB2_00944 at 971.826 kb on - strand, within EFB2_00944 at 971.826 kb on - strand, within EFB2_00944 at 971.863 kb on + strand, within EFB2_00944 at 971.863 kb on + strand, within EFB2_00944 at 971.863 kb on + strand, within EFB2_00944 at 971.864 kb on - strand, within EFB2_00944 at 971.864 kb on - strand, within EFB2_00944 at 971.864 kb on - strand, within EFB2_00944 at 971.864 kb on - strand, within EFB2_00944
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) remove 969,223 + EFB2_00941 0.26 +0.4 969,223 + EFB2_00941 0.26 +0.8 969,223 + EFB2_00941 0.26 -0.2 969,223 + EFB2_00941 0.26 -1.5 969,224 - EFB2_00941 0.26 -0.5 969,225 + EFB2_00941 0.26 +1.5 969,225 + EFB2_00941 0.26 -1.9 969,225 + EFB2_00941 0.26 +3.4 969,225 + EFB2_00941 0.26 +0.2 969,225 + EFB2_00941 0.26 +1.0 969,225 + EFB2_00941 0.26 -1.4 969,225 + EFB2_00941 0.26 +0.9 969,226 - EFB2_00941 0.27 +0.9 969,226 - EFB2_00941 0.27 +1.4 969,226 - EFB2_00941 0.27 -1.3 969,226 - EFB2_00941 0.27 -1.4 969,226 - EFB2_00941 0.27 -2.7 969,267 + EFB2_00941 0.30 +0.5 969,267 + EFB2_00941 0.30 +1.0 969,267 + EFB2_00941 0.30 -0.0 969,267 + EFB2_00941 0.30 -0.3 969,267 + EFB2_00941 0.30 -2.4 969,267 + EFB2_00941 0.30 -1.4 969,267 + EFB2_00941 0.30 -2.7 969,267 + EFB2_00941 0.30 +1.5 969,267 + EFB2_00941 0.30 -0.2 969,267 + EFB2_00941 0.30 -0.7 969,267 + EFB2_00941 0.30 +0.7 969,268 - EFB2_00941 0.31 +0.8 969,268 - EFB2_00941 0.31 +0.0 969,268 - EFB2_00941 0.31 -1.7 969,268 - EFB2_00941 0.31 +0.6 969,268 - EFB2_00941 0.31 -3.0 969,268 - EFB2_00941 0.31 +0.1 969,268 - EFB2_00941 0.31 +1.1 969,268 - EFB2_00941 0.31 -0.2 969,268 - EFB2_00941 0.31 -2.1 969,285 + EFB2_00941 0.32 -2.1 969,285 + EFB2_00941 0.32 -1.2 969,286 - EFB2_00941 0.32 +1.6 969,343 + EFB2_00941 0.38 +0.4 969,344 - EFB2_00941 0.38 +0.8 969,356 + EFB2_00941 0.39 +0.4 969,356 + EFB2_00941 0.39 +0.6 969,356 + EFB2_00941 0.39 +1.3 969,356 + EFB2_00941 0.39 +1.9 969,356 + EFB2_00941 0.39 -1.1 969,356 + EFB2_00941 0.39 +0.0 969,356 + EFB2_00941 0.39 +0.0 969,356 + EFB2_00941 0.39 -1.2 969,356 + EFB2_00941 0.39 -1.2 969,356 + EFB2_00941 0.39 +1.1 969,356 + EFB2_00941 0.39 -2.8 969,356 + EFB2_00941 0.39 +0.0 969,356 + EFB2_00941 0.39 +0.8 969,357 - EFB2_00941 0.39 -1.0 969,357 - EFB2_00941 0.39 -0.3 969,357 - EFB2_00941 0.39 +0.3 969,357 - EFB2_00941 0.39 -1.4 969,357 - EFB2_00941 0.39 -0.6 969,357 - EFB2_00941 0.39 +0.4 969,357 - EFB2_00941 0.39 -0.5 969,357 - EFB2_00941 0.39 -1.3 969,357 - EFB2_00941 0.39 +1.6 969,357 - EFB2_00941 0.39 -2.5 969,374 + EFB2_00941 0.41 +0.8 969,374 + EFB2_00941 0.41 -1.0 969,374 + EFB2_00941 0.41 -1.3 969,374 + EFB2_00941 0.41 +0.0 969,374 + EFB2_00941 0.41 -2.4 969,374 + EFB2_00941 0.41 +0.6 969,374 + EFB2_00941 0.41 -0.2 969,374 + EFB2_00941 0.41 -0.6 969,374 + EFB2_00941 0.41 -2.5 969,374 + EFB2_00941 0.41 +3.1 969,374 + EFB2_00941 0.41 -0.0 969,374 + EFB2_00941 0.41 -2.1 969,374 + EFB2_00941 0.41 -0.2 969,374 + EFB2_00941 0.41 -0.4 969,374 + EFB2_00941 0.41 -0.2 969,375 - EFB2_00941 0.41 +0.4 969,375 - EFB2_00941 0.41 -1.3 969,375 - EFB2_00941 0.41 -3.4 969,375 - EFB2_00941 0.41 +1.2 969,375 - EFB2_00941 0.41 +0.4 969,375 - EFB2_00941 0.41 +0.5 969,375 - EFB2_00941 0.41 -0.1 969,375 - EFB2_00941 0.41 -1.0 969,375 - EFB2_00941 0.41 +0.6 969,375 - EFB2_00941 0.41 -2.0 969,375 - EFB2_00941 0.41 -3.0 969,375 - EFB2_00941 0.41 +0.2 969,375 - EFB2_00941 0.41 -2.7 969,375 - EFB2_00941 0.41 +1.1 969,375 - 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EFB2_00944 0.61 -0.5 971,826 - EFB2_00944 0.61 -1.5 971,826 - EFB2_00944 0.61 +1.9 971,826 - EFB2_00944 0.61 +1.9 971,826 - EFB2_00944 0.61 +0.8 971,863 + EFB2_00944 0.66 -1.3 971,863 + EFB2_00944 0.66 -3.4 971,863 + EFB2_00944 0.66 +0.2 971,864 - EFB2_00944 0.66 +1.0 971,864 - EFB2_00944 0.66 +0.1 971,864 - EFB2_00944 0.66 +0.9 971,864 - EFB2_00944 0.66 -2.1
Or see this region's nucleotide sequence