Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02529

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02527 and MPMX26_02528 are separated by 65 nucleotidesMPMX26_02528 and MPMX26_02529 are separated by 186 nucleotidesMPMX26_02529 and MPMX26_02530 are separated by 268 nucleotidesMPMX26_02530 and MPMX26_02531 are separated by 463 nucleotides MPMX26_02527: MPMX26_02527 - hypothetical protein, at 2,615,954 to 2,616,310 _02527 MPMX26_02528: MPMX26_02528 - Threonine efflux protein, at 2,616,376 to 2,616,999 _02528 MPMX26_02529: MPMX26_02529 - hypothetical protein, at 2,617,186 to 2,617,641 _02529 MPMX26_02530: MPMX26_02530 - hypothetical protein, at 2,617,910 to 2,618,077 _02530 MPMX26_02531: MPMX26_02531 - putative multidrug resistance protein EmrY, at 2,618,541 to 2,620,178 _02531 Position (kb) 2617 2618Strain fitness (log2 ratio) -1 0 1at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.189 kb on + strand, within MPMX26_02527at 2616.258 kb on + strand, within MPMX26_02527at 2616.258 kb on + strand, within MPMX26_02527at 2616.267 kb on + strand, within MPMX26_02527at 2616.267 kb on + strand, within MPMX26_02527at 2616.276 kb on + strandat 2616.326 kb on + strandat 2616.381 kb on - strandat 2616.381 kb on - strandat 2616.423 kb on - strandat 2616.423 kb on - strandat 2616.428 kb on - strandat 2616.471 kb on - strand, within MPMX26_02528at 2616.492 kb on - strand, within MPMX26_02528at 2616.497 kb on - strand, within MPMX26_02528at 2616.512 kb on - strand, within MPMX26_02528at 2616.516 kb on - strand, within MPMX26_02528at 2616.550 kb on - strand, within MPMX26_02528at 2616.550 kb on - strand, within MPMX26_02528at 2616.609 kb on - strand, within MPMX26_02528at 2616.648 kb on - strand, within MPMX26_02528at 2616.653 kb on - strand, within MPMX26_02528at 2616.653 kb on - strand, within MPMX26_02528at 2616.661 kb on - strand, within MPMX26_02528at 2616.661 kb on - strand, within MPMX26_02528at 2616.703 kb on - strand, within MPMX26_02528at 2616.703 kb on - strand, within MPMX26_02528at 2616.708 kb on - strand, within MPMX26_02528at 2616.748 kb on - strand, within MPMX26_02528at 2616.825 kb on - strand, within MPMX26_02528at 2616.825 kb on - strand, within MPMX26_02528at 2616.825 kb on - strand, within MPMX26_02528at 2616.846 kb on - strand, within MPMX26_02528at 2616.846 kb on - strand, within MPMX26_02528at 2616.846 kb on - strand, within MPMX26_02528at 2616.846 kb on - strand, within MPMX26_02528at 2616.865 kb on - strand, within MPMX26_02528at 2616.865 kb on - strand, within MPMX26_02528at 2616.865 kb on - strand, within MPMX26_02528at 2616.865 kb on - strand, within MPMX26_02528at 2616.865 kb on - strand, within MPMX26_02528at 2616.870 kb on - strand, within MPMX26_02528at 2616.870 kb on - strand, within MPMX26_02528at 2616.875 kb on - strand, within MPMX26_02528at 2616.875 kb on - strand, within MPMX26_02528at 2616.875 kb on - strand, within MPMX26_02528at 2616.875 kb on - strand, within MPMX26_02528at 2616.877 kb on - strand, within MPMX26_02528at 2616.877 kb on - strand, within MPMX26_02528at 2616.880 kb on - strand, within MPMX26_02528at 2616.887 kb on - strand, within MPMX26_02528at 2616.947 kb on - strandat 2616.947 kb on - strandat 2616.947 kb on - strandat 2616.955 kb on - strandat 2617.227 kb on + strandat 2617.294 kb on + strand, within MPMX26_02529at 2617.330 kb on + strand, within MPMX26_02529at 2617.342 kb on + strand, within MPMX26_02529at 2617.361 kb on + strand, within MPMX26_02529at 2617.386 kb on + strand, within MPMX26_02529at 2617.386 kb on + strand, within MPMX26_02529at 2617.386 kb on + strand, within MPMX26_02529at 2617.386 kb on + strand, within MPMX26_02529at 2617.386 kb on + strand, within MPMX26_02529at 2617.386 kb on + strand, within MPMX26_02529at 2617.386 kb on + strand, within MPMX26_02529at 2617.386 kb on + strand, within MPMX26_02529at 2617.386 kb on + strand, within MPMX26_02529at 2617.386 kb on + strand, within MPMX26_02529at 2617.386 kb on + strand, within MPMX26_02529at 2617.401 kb on + strand, within MPMX26_02529at 2617.401 kb on + strand, within MPMX26_02529at 2617.401 kb on + strand, within MPMX26_02529at 2617.401 kb on + strand, within MPMX26_02529at 2617.401 kb on + strand, within MPMX26_02529at 2617.429 kb on + strand, within MPMX26_02529at 2617.498 kb on + strand, within MPMX26_02529at 2617.498 kb on + strand, within MPMX26_02529at 2617.503 kb on + strand, within MPMX26_02529at 2617.526 kb on + strand, within MPMX26_02529at 2617.567 kb on + strand, within MPMX26_02529at 2617.567 kb on + strand, within MPMX26_02529at 2618.413 kb on + strandat 2618.551 kb on - strandat 2618.595 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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2,616,189 + MPMX26_02527 0.66 -0.2
2,616,189 + MPMX26_02527 0.66 +0.2
2,616,189 + MPMX26_02527 0.66 -0.3
2,616,189 + MPMX26_02527 0.66 +0.8
2,616,189 + MPMX26_02527 0.66 +0.5
2,616,189 + MPMX26_02527 0.66 -0.1
2,616,189 + MPMX26_02527 0.66 +1.2
2,616,189 + MPMX26_02527 0.66 +0.5
2,616,189 + MPMX26_02527 0.66 +0.2
2,616,189 + MPMX26_02527 0.66 -0.2
2,616,189 + MPMX26_02527 0.66 -0.2
2,616,189 + MPMX26_02527 0.66 +0.2
2,616,189 + MPMX26_02527 0.66 +0.4
2,616,189 + MPMX26_02527 0.66 -0.7
2,616,258 + MPMX26_02527 0.85 +0.1
2,616,258 + MPMX26_02527 0.85 +0.0
2,616,267 + MPMX26_02527 0.88 -0.7
2,616,267 + MPMX26_02527 0.88 +0.4
2,616,276 + -0.4
2,616,326 + +0.6
2,616,381 - -0.3
2,616,381 - +0.2
2,616,423 - +0.5
2,616,423 - -0.1
2,616,428 - +0.2
2,616,471 - MPMX26_02528 0.15 -0.0
2,616,492 - MPMX26_02528 0.19 -0.2
2,616,497 - MPMX26_02528 0.19 -0.3
2,616,512 - MPMX26_02528 0.22 +0.2
2,616,516 - MPMX26_02528 0.22 +0.4
2,616,550 - MPMX26_02528 0.28 +0.3
2,616,550 - MPMX26_02528 0.28 -0.2
2,616,609 - MPMX26_02528 0.37 -0.3
2,616,648 - MPMX26_02528 0.44 +0.0
2,616,653 - MPMX26_02528 0.44 -0.1
2,616,653 - MPMX26_02528 0.44 +0.1
2,616,661 - MPMX26_02528 0.46 -0.5
2,616,661 - MPMX26_02528 0.46 +0.3
2,616,703 - MPMX26_02528 0.52 -0.0
2,616,703 - MPMX26_02528 0.52 +0.6
2,616,708 - MPMX26_02528 0.53 +0.3
2,616,748 - MPMX26_02528 0.60 -0.3
2,616,825 - MPMX26_02528 0.72 +0.0
2,616,825 - MPMX26_02528 0.72 +0.2
2,616,825 - MPMX26_02528 0.72 -0.1
2,616,846 - MPMX26_02528 0.75 +0.5
2,616,846 - MPMX26_02528 0.75 +0.1
2,616,846 - MPMX26_02528 0.75 -0.2
2,616,846 - MPMX26_02528 0.75 +0.2
2,616,865 - MPMX26_02528 0.78 -0.2
2,616,865 - MPMX26_02528 0.78 -0.2
2,616,865 - MPMX26_02528 0.78 +0.1
2,616,865 - MPMX26_02528 0.78 +0.5
2,616,865 - MPMX26_02528 0.78 -0.1
2,616,870 - MPMX26_02528 0.79 +0.5
2,616,870 - MPMX26_02528 0.79 +0.0
2,616,875 - MPMX26_02528 0.80 -0.2
2,616,875 - MPMX26_02528 0.80 -0.2
2,616,875 - MPMX26_02528 0.80 -0.4
2,616,875 - MPMX26_02528 0.80 -0.0
2,616,877 - MPMX26_02528 0.80 -0.3
2,616,877 - MPMX26_02528 0.80 -0.0
2,616,880 - MPMX26_02528 0.81 -0.5
2,616,887 - MPMX26_02528 0.82 -0.0
2,616,947 - -0.1
2,616,947 - +0.1
2,616,947 - +0.6
2,616,955 - -0.1
2,617,227 + +0.1
2,617,294 + MPMX26_02529 0.24 -0.3
2,617,330 + MPMX26_02529 0.32 -0.0
2,617,342 + MPMX26_02529 0.34 -0.1
2,617,361 + MPMX26_02529 0.38 -0.4
2,617,386 + MPMX26_02529 0.44 +0.1
2,617,386 + MPMX26_02529 0.44 +0.6
2,617,386 + MPMX26_02529 0.44 +0.9
2,617,386 + MPMX26_02529 0.44 -0.3
2,617,386 + MPMX26_02529 0.44 +0.2
2,617,386 + MPMX26_02529 0.44 +0.1
2,617,386 + MPMX26_02529 0.44 +0.1
2,617,386 + MPMX26_02529 0.44 +0.4
2,617,386 + MPMX26_02529 0.44 +0.5
2,617,386 + MPMX26_02529 0.44 +0.4
2,617,386 + MPMX26_02529 0.44 -0.1
2,617,401 + MPMX26_02529 0.47 +0.1
2,617,401 + MPMX26_02529 0.47 +0.7
2,617,401 + MPMX26_02529 0.47 -0.3
2,617,401 + MPMX26_02529 0.47 +0.2
2,617,401 + MPMX26_02529 0.47 +0.0
2,617,429 + MPMX26_02529 0.53 +0.5
2,617,498 + MPMX26_02529 0.68 +0.2
2,617,498 + MPMX26_02529 0.68 +0.2
2,617,503 + MPMX26_02529 0.70 +0.4
2,617,526 + MPMX26_02529 0.75 -0.8
2,617,567 + MPMX26_02529 0.84 +0.1
2,617,567 + MPMX26_02529 0.84 +0.3
2,618,413 + +0.2
2,618,551 - +0.2
2,618,595 + -0.2

Or see this region's nucleotide sequence