Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01106 and MPMX26_01107 are separated by 48 nucleotides MPMX26_01107 and MPMX26_01108 are separated by 14 nucleotides MPMX26_01108 and MPMX26_01109 are separated by 16 nucleotides MPMX26_01109 and MPMX26_01110 are separated by 133 nucleotides
MPMX26_01106: MPMX26_01106 - Glutathione S-transferase GST-6.0, at 1,178,856 to 1,179,467
_01106
MPMX26_01107: MPMX26_01107 - Thiazole synthase, at 1,179,516 to 1,180,301
_01107
MPMX26_01108: MPMX26_01108 - hypothetical protein, at 1,180,316 to 1,180,513
_01108
MPMX26_01109: MPMX26_01109 - hypothetical protein, at 1,180,530 to 1,180,895
_01109
MPMX26_01110: MPMX26_01110 - RNA polymerase sigma factor RpoH, at 1,181,029 to 1,181,898
_01110
Position (kb)
1180
1181 Strain fitness (log2 ratio)
-1
0
1
2 at 1179.317 kb on + strand, within MPMX26_01106 at 1179.369 kb on + strand, within MPMX26_01106 at 1179.419 kb on + strand at 1179.419 kb on + strand at 1179.419 kb on + strand at 1179.496 kb on - strand at 1179.498 kb on - strand at 1179.544 kb on - strand at 1179.544 kb on - strand at 1179.544 kb on - strand at 1179.547 kb on - strand at 1179.585 kb on - strand at 1179.595 kb on - strand, within MPMX26_01107 at 1179.667 kb on - strand, within MPMX26_01107 at 1179.675 kb on - strand, within MPMX26_01107 at 1179.675 kb on - strand, within MPMX26_01107 at 1179.677 kb on - strand, within MPMX26_01107 at 1179.677 kb on - strand, within MPMX26_01107 at 1179.677 kb on - strand, within MPMX26_01107 at 1179.677 kb on - strand, within MPMX26_01107 at 1179.677 kb on - strand, within MPMX26_01107 at 1179.677 kb on - strand, within MPMX26_01107 at 1179.677 kb on - strand, within MPMX26_01107 at 1179.677 kb on - strand, within MPMX26_01107 at 1179.696 kb on - strand, within MPMX26_01107 at 1179.734 kb on - strand, within MPMX26_01107 at 1179.734 kb on - strand, within MPMX26_01107 at 1179.734 kb on - strand, within MPMX26_01107 at 1179.739 kb on - strand, within MPMX26_01107 at 1179.744 kb on - strand, within MPMX26_01107 at 1179.744 kb on - strand, within MPMX26_01107 at 1179.809 kb on - strand, within MPMX26_01107 at 1179.819 kb on - strand, within MPMX26_01107 at 1179.847 kb on - strand, within MPMX26_01107 at 1179.847 kb on - strand, within MPMX26_01107 at 1179.847 kb on - strand, within MPMX26_01107 at 1179.863 kb on - strand, within MPMX26_01107 at 1179.929 kb on - strand, within MPMX26_01107 at 1179.956 kb on - strand, within MPMX26_01107 at 1179.957 kb on - strand, within MPMX26_01107 at 1179.989 kb on - strand, within MPMX26_01107 at 1179.989 kb on - strand, within MPMX26_01107 at 1179.997 kb on - strand, within MPMX26_01107 at 1179.997 kb on - strand, within MPMX26_01107 at 1180.002 kb on - strand, within MPMX26_01107 at 1180.002 kb on - strand, within MPMX26_01107 at 1180.039 kb on - strand, within MPMX26_01107 at 1180.042 kb on - strand, within MPMX26_01107 at 1180.069 kb on - strand, within MPMX26_01107 at 1180.069 kb on - strand, within MPMX26_01107 at 1180.083 kb on - strand, within MPMX26_01107 at 1180.117 kb on - strand, within MPMX26_01107 at 1180.117 kb on - strand, within MPMX26_01107 at 1180.127 kb on - strand, within MPMX26_01107 at 1180.132 kb on - strand, within MPMX26_01107 at 1180.132 kb on - strand, within MPMX26_01107 at 1180.141 kb on - strand, within MPMX26_01107 at 1180.141 kb on - strand, within MPMX26_01107 at 1180.141 kb on - strand, within MPMX26_01107 at 1180.202 kb on - strand, within MPMX26_01107 at 1180.381 kb on - strand, within MPMX26_01108 at 1180.433 kb on - strand, within MPMX26_01108 at 1180.441 kb on - strand, within MPMX26_01108 at 1180.446 kb on - strand, within MPMX26_01108 at 1180.473 kb on - strand, within MPMX26_01108 at 1180.484 kb on - strand, within MPMX26_01108 at 1180.513 kb on - strand at 1180.618 kb on - strand, within MPMX26_01109 at 1180.618 kb on - strand, within MPMX26_01109 at 1180.645 kb on - strand, within MPMX26_01109 at 1180.683 kb on - strand, within MPMX26_01109 at 1180.728 kb on - strand, within MPMX26_01109 at 1180.757 kb on - strand, within MPMX26_01109 at 1180.757 kb on - strand, within MPMX26_01109 at 1180.757 kb on - strand, within MPMX26_01109 at 1180.791 kb on - strand, within MPMX26_01109 at 1180.793 kb on - strand, within MPMX26_01109 at 1180.802 kb on - strand, within MPMX26_01109 at 1180.900 kb on - strand at 1181.013 kb on - strand at 1181.041 kb on - strand at 1181.041 kb on - strand at 1181.041 kb on - strand at 1181.041 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 1,179,317 + MPMX26_01106 0.75 +1.0 1,179,369 + MPMX26_01106 0.84 +0.2 1,179,419 + -0.3 1,179,419 + +0.1 1,179,419 + -0.3 1,179,496 - -0.2 1,179,498 - +0.6 1,179,544 - +0.6 1,179,544 - -0.3 1,179,544 - +0.5 1,179,547 - +0.4 1,179,585 - +0.1 1,179,595 - MPMX26_01107 0.10 +1.7 1,179,667 - MPMX26_01107 0.19 -0.3 1,179,675 - MPMX26_01107 0.20 +0.3 1,179,675 - MPMX26_01107 0.20 -0.3 1,179,677 - MPMX26_01107 0.20 -0.2 1,179,677 - MPMX26_01107 0.20 +0.7 1,179,677 - MPMX26_01107 0.20 +0.5 1,179,677 - MPMX26_01107 0.20 -0.1 1,179,677 - MPMX26_01107 0.20 +1.9 1,179,677 - MPMX26_01107 0.20 +0.3 1,179,677 - MPMX26_01107 0.20 +0.3 1,179,677 - MPMX26_01107 0.20 +1.4 1,179,696 - MPMX26_01107 0.23 +0.2 1,179,734 - MPMX26_01107 0.28 -0.1 1,179,734 - MPMX26_01107 0.28 +0.0 1,179,734 - MPMX26_01107 0.28 -0.2 1,179,739 - MPMX26_01107 0.28 -0.0 1,179,744 - MPMX26_01107 0.29 -0.1 1,179,744 - MPMX26_01107 0.29 -0.2 1,179,809 - MPMX26_01107 0.37 +0.4 1,179,819 - MPMX26_01107 0.39 +0.5 1,179,847 - MPMX26_01107 0.42 -1.0 1,179,847 - MPMX26_01107 0.42 -0.4 1,179,847 - MPMX26_01107 0.42 -0.4 1,179,863 - MPMX26_01107 0.44 +0.2 1,179,929 - MPMX26_01107 0.53 +0.5 1,179,956 - MPMX26_01107 0.56 +0.2 1,179,957 - MPMX26_01107 0.56 +1.1 1,179,989 - MPMX26_01107 0.60 -0.1 1,179,989 - MPMX26_01107 0.60 +0.0 1,179,997 - MPMX26_01107 0.61 -1.4 1,179,997 - MPMX26_01107 0.61 +0.4 1,180,002 - MPMX26_01107 0.62 -0.2 1,180,002 - MPMX26_01107 0.62 +0.6 1,180,039 - MPMX26_01107 0.67 +0.4 1,180,042 - MPMX26_01107 0.67 +1.2 1,180,069 - MPMX26_01107 0.70 +0.1 1,180,069 - MPMX26_01107 0.70 +0.2 1,180,083 - MPMX26_01107 0.72 -0.2 1,180,117 - MPMX26_01107 0.76 +0.9 1,180,117 - MPMX26_01107 0.76 -0.2 1,180,127 - MPMX26_01107 0.78 +0.3 1,180,132 - MPMX26_01107 0.78 +0.3 1,180,132 - MPMX26_01107 0.78 +0.3 1,180,141 - MPMX26_01107 0.80 -0.5 1,180,141 - MPMX26_01107 0.80 +1.7 1,180,141 - MPMX26_01107 0.80 -0.0 1,180,202 - MPMX26_01107 0.87 -0.0 1,180,381 - MPMX26_01108 0.33 +0.5 1,180,433 - MPMX26_01108 0.59 -0.2 1,180,441 - MPMX26_01108 0.63 -0.1 1,180,446 - MPMX26_01108 0.66 +2.0 1,180,473 - MPMX26_01108 0.79 +1.1 1,180,484 - MPMX26_01108 0.85 +0.4 1,180,513 - +0.2 1,180,618 - MPMX26_01109 0.24 +1.0 1,180,618 - MPMX26_01109 0.24 +0.4 1,180,645 - MPMX26_01109 0.31 +1.4 1,180,683 - MPMX26_01109 0.42 +0.3 1,180,728 - MPMX26_01109 0.54 +0.2 1,180,757 - MPMX26_01109 0.62 -0.1 1,180,757 - MPMX26_01109 0.62 -0.0 1,180,757 - MPMX26_01109 0.62 +0.1 1,180,791 - MPMX26_01109 0.71 -0.2 1,180,793 - MPMX26_01109 0.72 -0.0 1,180,802 - MPMX26_01109 0.74 -0.2 1,180,900 - +0.1 1,181,013 - +1.0 1,181,041 - +1.5 1,181,041 - +0.2 1,181,041 - -0.7 1,181,041 - +0.0
Or see this region's nucleotide sequence