Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01108

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01106 and MPMX26_01107 are separated by 48 nucleotidesMPMX26_01107 and MPMX26_01108 are separated by 14 nucleotidesMPMX26_01108 and MPMX26_01109 are separated by 16 nucleotidesMPMX26_01109 and MPMX26_01110 are separated by 133 nucleotides MPMX26_01106: MPMX26_01106 - Glutathione S-transferase GST-6.0, at 1,178,856 to 1,179,467 _01106 MPMX26_01107: MPMX26_01107 - Thiazole synthase, at 1,179,516 to 1,180,301 _01107 MPMX26_01108: MPMX26_01108 - hypothetical protein, at 1,180,316 to 1,180,513 _01108 MPMX26_01109: MPMX26_01109 - hypothetical protein, at 1,180,530 to 1,180,895 _01109 MPMX26_01110: MPMX26_01110 - RNA polymerase sigma factor RpoH, at 1,181,029 to 1,181,898 _01110 Position (kb) 1180 1181Strain fitness (log2 ratio) -1 0 1 2at 1179.317 kb on + strand, within MPMX26_01106at 1179.369 kb on + strand, within MPMX26_01106at 1179.419 kb on + strandat 1179.419 kb on + strandat 1179.419 kb on + strandat 1179.496 kb on - strandat 1179.498 kb on - strandat 1179.544 kb on - strandat 1179.544 kb on - strandat 1179.544 kb on - strandat 1179.547 kb on - strandat 1179.585 kb on - strandat 1179.595 kb on - strand, within MPMX26_01107at 1179.667 kb on - strand, within MPMX26_01107at 1179.675 kb on - strand, within MPMX26_01107at 1179.675 kb on - strand, within MPMX26_01107at 1179.677 kb on - strand, within MPMX26_01107at 1179.677 kb on - strand, within MPMX26_01107at 1179.677 kb on - strand, within MPMX26_01107at 1179.677 kb on - strand, within MPMX26_01107at 1179.677 kb on - strand, within MPMX26_01107at 1179.677 kb on - strand, within MPMX26_01107at 1179.677 kb on - strand, within MPMX26_01107at 1179.677 kb on - strand, within MPMX26_01107at 1179.696 kb on - strand, within MPMX26_01107at 1179.734 kb on - strand, within MPMX26_01107at 1179.734 kb on - strand, within MPMX26_01107at 1179.734 kb on - strand, within MPMX26_01107at 1179.739 kb on - strand, within MPMX26_01107at 1179.744 kb on - strand, within MPMX26_01107at 1179.744 kb on - strand, within MPMX26_01107at 1179.809 kb on - strand, within MPMX26_01107at 1179.819 kb on - strand, within MPMX26_01107at 1179.847 kb on - strand, within MPMX26_01107at 1179.847 kb on - strand, within MPMX26_01107at 1179.847 kb on - strand, within MPMX26_01107at 1179.863 kb on - strand, within MPMX26_01107at 1179.929 kb on - strand, within MPMX26_01107at 1179.956 kb on - strand, within MPMX26_01107at 1179.957 kb on - strand, within MPMX26_01107at 1179.989 kb on - strand, within MPMX26_01107at 1179.989 kb on - strand, within MPMX26_01107at 1179.997 kb on - strand, within MPMX26_01107at 1179.997 kb on - strand, within MPMX26_01107at 1180.002 kb on - strand, within MPMX26_01107at 1180.002 kb on - strand, within MPMX26_01107at 1180.039 kb on - strand, within MPMX26_01107at 1180.042 kb on - strand, within MPMX26_01107at 1180.069 kb on - strand, within MPMX26_01107at 1180.069 kb on - strand, within MPMX26_01107at 1180.083 kb on - strand, within MPMX26_01107at 1180.117 kb on - strand, within MPMX26_01107at 1180.117 kb on - strand, within MPMX26_01107at 1180.127 kb on - strand, within MPMX26_01107at 1180.132 kb on - strand, within MPMX26_01107at 1180.132 kb on - strand, within MPMX26_01107at 1180.141 kb on - strand, within MPMX26_01107at 1180.141 kb on - strand, within MPMX26_01107at 1180.141 kb on - strand, within MPMX26_01107at 1180.202 kb on - strand, within MPMX26_01107at 1180.381 kb on - strand, within MPMX26_01108at 1180.433 kb on - strand, within MPMX26_01108at 1180.441 kb on - strand, within MPMX26_01108at 1180.446 kb on - strand, within MPMX26_01108at 1180.473 kb on - strand, within MPMX26_01108at 1180.484 kb on - strand, within MPMX26_01108at 1180.513 kb on - strandat 1180.618 kb on - strand, within MPMX26_01109at 1180.618 kb on - strand, within MPMX26_01109at 1180.645 kb on - strand, within MPMX26_01109at 1180.683 kb on - strand, within MPMX26_01109at 1180.728 kb on - strand, within MPMX26_01109at 1180.757 kb on - strand, within MPMX26_01109at 1180.757 kb on - strand, within MPMX26_01109at 1180.757 kb on - strand, within MPMX26_01109at 1180.791 kb on - strand, within MPMX26_01109at 1180.793 kb on - strand, within MPMX26_01109at 1180.802 kb on - strand, within MPMX26_01109at 1180.900 kb on - strandat 1181.013 kb on - strandat 1181.041 kb on - strandat 1181.041 kb on - strandat 1181.041 kb on - strandat 1181.041 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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1,179,317 + MPMX26_01106 0.75 +1.0
1,179,369 + MPMX26_01106 0.84 +0.2
1,179,419 + -0.3
1,179,419 + +0.1
1,179,419 + -0.3
1,179,496 - -0.2
1,179,498 - +0.6
1,179,544 - +0.6
1,179,544 - -0.3
1,179,544 - +0.5
1,179,547 - +0.4
1,179,585 - +0.1
1,179,595 - MPMX26_01107 0.10 +1.7
1,179,667 - MPMX26_01107 0.19 -0.3
1,179,675 - MPMX26_01107 0.20 +0.3
1,179,675 - MPMX26_01107 0.20 -0.3
1,179,677 - MPMX26_01107 0.20 -0.2
1,179,677 - MPMX26_01107 0.20 +0.7
1,179,677 - MPMX26_01107 0.20 +0.5
1,179,677 - MPMX26_01107 0.20 -0.1
1,179,677 - MPMX26_01107 0.20 +1.9
1,179,677 - MPMX26_01107 0.20 +0.3
1,179,677 - MPMX26_01107 0.20 +0.3
1,179,677 - MPMX26_01107 0.20 +1.4
1,179,696 - MPMX26_01107 0.23 +0.2
1,179,734 - MPMX26_01107 0.28 -0.1
1,179,734 - MPMX26_01107 0.28 +0.0
1,179,734 - MPMX26_01107 0.28 -0.2
1,179,739 - MPMX26_01107 0.28 -0.0
1,179,744 - MPMX26_01107 0.29 -0.1
1,179,744 - MPMX26_01107 0.29 -0.2
1,179,809 - MPMX26_01107 0.37 +0.4
1,179,819 - MPMX26_01107 0.39 +0.5
1,179,847 - MPMX26_01107 0.42 -1.0
1,179,847 - MPMX26_01107 0.42 -0.4
1,179,847 - MPMX26_01107 0.42 -0.4
1,179,863 - MPMX26_01107 0.44 +0.2
1,179,929 - MPMX26_01107 0.53 +0.5
1,179,956 - MPMX26_01107 0.56 +0.2
1,179,957 - MPMX26_01107 0.56 +1.1
1,179,989 - MPMX26_01107 0.60 -0.1
1,179,989 - MPMX26_01107 0.60 +0.0
1,179,997 - MPMX26_01107 0.61 -1.4
1,179,997 - MPMX26_01107 0.61 +0.4
1,180,002 - MPMX26_01107 0.62 -0.2
1,180,002 - MPMX26_01107 0.62 +0.6
1,180,039 - MPMX26_01107 0.67 +0.4
1,180,042 - MPMX26_01107 0.67 +1.2
1,180,069 - MPMX26_01107 0.70 +0.1
1,180,069 - MPMX26_01107 0.70 +0.2
1,180,083 - MPMX26_01107 0.72 -0.2
1,180,117 - MPMX26_01107 0.76 +0.9
1,180,117 - MPMX26_01107 0.76 -0.2
1,180,127 - MPMX26_01107 0.78 +0.3
1,180,132 - MPMX26_01107 0.78 +0.3
1,180,132 - MPMX26_01107 0.78 +0.3
1,180,141 - MPMX26_01107 0.80 -0.5
1,180,141 - MPMX26_01107 0.80 +1.7
1,180,141 - MPMX26_01107 0.80 -0.0
1,180,202 - MPMX26_01107 0.87 -0.0
1,180,381 - MPMX26_01108 0.33 +0.5
1,180,433 - MPMX26_01108 0.59 -0.2
1,180,441 - MPMX26_01108 0.63 -0.1
1,180,446 - MPMX26_01108 0.66 +2.0
1,180,473 - MPMX26_01108 0.79 +1.1
1,180,484 - MPMX26_01108 0.85 +0.4
1,180,513 - +0.2
1,180,618 - MPMX26_01109 0.24 +1.0
1,180,618 - MPMX26_01109 0.24 +0.4
1,180,645 - MPMX26_01109 0.31 +1.4
1,180,683 - MPMX26_01109 0.42 +0.3
1,180,728 - MPMX26_01109 0.54 +0.2
1,180,757 - MPMX26_01109 0.62 -0.1
1,180,757 - MPMX26_01109 0.62 -0.0
1,180,757 - MPMX26_01109 0.62 +0.1
1,180,791 - MPMX26_01109 0.71 -0.2
1,180,793 - MPMX26_01109 0.72 -0.0
1,180,802 - MPMX26_01109 0.74 -0.2
1,180,900 - +0.1
1,181,013 - +1.0
1,181,041 - +1.5
1,181,041 - +0.2
1,181,041 - -0.7
1,181,041 - +0.0

Or see this region's nucleotide sequence