Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00177

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00175 and MPMX26_00176 are separated by 68 nucleotidesMPMX26_00176 and MPMX26_00177 are separated by 67 nucleotidesMPMX26_00177 and MPMX26_00178 are separated by 211 nucleotides MPMX26_00175: MPMX26_00175 - hypothetical protein, at 189,775 to 190,005 _00175 MPMX26_00176: MPMX26_00176 - Glutamyl-Q tRNA(Asp) synthetase, at 190,074 to 190,928 _00176 MPMX26_00177: MPMX26_00177 - RNA polymerase-binding transcription factor DksA, at 190,996 to 191,529 _00177 MPMX26_00178: MPMX26_00178 - 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, at 191,741 to 192,550 _00178 Position (kb) 190 191 192Strain fitness (log2 ratio) -3 -2 -1 0 1at 190.033 kb on - strandat 190.033 kb on - strandat 190.033 kb on - strandat 190.033 kb on - strandat 190.110 kb on - strandat 190.121 kb on - strandat 190.121 kb on - strandat 190.128 kb on - strandat 190.133 kb on - strandat 190.273 kb on - strand, within MPMX26_00176at 190.279 kb on - strand, within MPMX26_00176at 190.309 kb on - strand, within MPMX26_00176at 190.311 kb on - strand, within MPMX26_00176at 190.311 kb on - strand, within MPMX26_00176at 190.311 kb on - strand, within MPMX26_00176at 190.311 kb on - strand, within MPMX26_00176at 190.316 kb on - strand, within MPMX26_00176at 190.316 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.378 kb on - strand, within MPMX26_00176at 190.399 kb on - strand, within MPMX26_00176at 190.407 kb on - strand, within MPMX26_00176at 190.426 kb on - strand, within MPMX26_00176at 190.428 kb on - strand, within MPMX26_00176at 190.428 kb on - strand, within MPMX26_00176at 190.447 kb on - strand, within MPMX26_00176at 190.459 kb on - strand, within MPMX26_00176at 190.498 kb on - strand, within MPMX26_00176at 190.535 kb on - strand, within MPMX26_00176at 190.535 kb on - strand, within MPMX26_00176at 190.555 kb on - strand, within MPMX26_00176at 190.555 kb on - strand, within MPMX26_00176at 190.555 kb on - strand, within MPMX26_00176at 190.555 kb on - strand, within MPMX26_00176at 190.555 kb on - strand, within MPMX26_00176at 190.611 kb on - strand, within MPMX26_00176at 190.611 kb on - strand, within MPMX26_00176at 190.611 kb on - strand, within MPMX26_00176at 190.611 kb on - strand, within MPMX26_00176at 190.611 kb on - strand, within MPMX26_00176at 190.616 kb on - strand, within MPMX26_00176at 190.655 kb on - strand, within MPMX26_00176at 190.656 kb on - strand, within MPMX26_00176at 190.757 kb on - strand, within MPMX26_00176at 190.757 kb on - strand, within MPMX26_00176at 190.757 kb on - strand, within MPMX26_00176at 190.757 kb on - strand, within MPMX26_00176at 190.757 kb on - strand, within MPMX26_00176at 190.767 kb on - strand, within MPMX26_00176at 190.767 kb on - strand, within MPMX26_00176at 190.773 kb on - strand, within MPMX26_00176at 190.773 kb on - strand, within MPMX26_00176at 190.774 kb on - strand, within MPMX26_00176at 190.783 kb on - strand, within MPMX26_00176at 190.783 kb on - strand, within MPMX26_00176at 190.783 kb on - strand, within MPMX26_00176at 190.834 kb on - strand, within MPMX26_00176at 190.836 kb on - strand, within MPMX26_00176at 190.846 kb on - strandat 190.876 kb on - strandat 190.881 kb on - strandat 190.911 kb on - strandat 190.920 kb on - strandat 190.920 kb on - strandat 190.921 kb on - strandat 190.935 kb on - strandat 190.971 kb on - strandat 191.053 kb on - strand, within MPMX26_00177at 191.053 kb on - strand, within MPMX26_00177at 191.078 kb on - strand, within MPMX26_00177at 191.078 kb on - strand, within MPMX26_00177at 191.078 kb on - strand, within MPMX26_00177at 191.078 kb on - strand, within MPMX26_00177at 191.078 kb on - strand, within MPMX26_00177at 191.078 kb on - strand, within MPMX26_00177at 191.088 kb on - strand, within MPMX26_00177at 191.094 kb on - strand, within MPMX26_00177at 191.125 kb on - strand, within MPMX26_00177at 191.130 kb on - strand, within MPMX26_00177at 191.157 kb on - strand, within MPMX26_00177at 191.177 kb on - strand, within MPMX26_00177at 191.255 kb on - strand, within MPMX26_00177at 191.255 kb on - strand, within MPMX26_00177at 191.260 kb on - strand, within MPMX26_00177at 191.260 kb on - strand, within MPMX26_00177at 191.280 kb on - strand, within MPMX26_00177at 191.292 kb on - strand, within MPMX26_00177at 191.307 kb on - strand, within MPMX26_00177at 191.354 kb on - strand, within MPMX26_00177at 191.362 kb on - strand, within MPMX26_00177at 191.396 kb on - strand, within MPMX26_00177at 191.396 kb on - strand, within MPMX26_00177at 191.401 kb on - strand, within MPMX26_00177at 191.417 kb on - strand, within MPMX26_00177at 191.419 kb on - strand, within MPMX26_00177at 191.419 kb on - strand, within MPMX26_00177at 191.422 kb on - strand, within MPMX26_00177at 191.505 kb on - strandat 191.536 kb on - strandat 191.541 kb on - strandat 191.553 kb on - strandat 191.610 kb on - strandat 191.672 kb on - strandat 191.680 kb on - strandat 191.680 kb on - strandat 191.680 kb on - strandat 191.680 kb on - strandat 191.680 kb on - strandat 191.694 kb on - strandat 191.797 kb on - strandat 191.820 kb on - strandat 191.825 kb on - strand, within MPMX26_00178at 191.851 kb on - strand, within MPMX26_00178at 191.852 kb on - strand, within MPMX26_00178at 191.852 kb on - strand, within MPMX26_00178at 191.862 kb on + strand, within MPMX26_00178at 191.883 kb on + strand, within MPMX26_00178at 191.891 kb on - strand, within MPMX26_00178at 191.891 kb on - strand, within MPMX26_00178at 191.891 kb on - strand, within MPMX26_00178at 191.896 kb on - strand, within MPMX26_00178at 191.901 kb on - strand, within MPMX26_00178at 191.901 kb on - strand, within MPMX26_00178at 191.901 kb on - strand, within MPMX26_00178at 191.906 kb on - strand, within MPMX26_00178at 191.909 kb on - strand, within MPMX26_00178at 191.956 kb on - strand, within MPMX26_00178at 191.956 kb on - strand, within MPMX26_00178at 191.956 kb on - strand, within MPMX26_00178at 191.956 kb on - strand, within MPMX26_00178at 191.956 kb on - strand, within MPMX26_00178at 191.956 kb on - strand, within MPMX26_00178at 191.956 kb on - strand, within MPMX26_00178at 191.956 kb on - strand, within MPMX26_00178at 191.956 kb on - strand, within MPMX26_00178at 191.988 kb on - strand, within MPMX26_00178at 191.988 kb on - strand, within MPMX26_00178at 191.993 kb on - strand, within MPMX26_00178at 191.993 kb on - strand, within MPMX26_00178at 192.040 kb on + strand, within MPMX26_00178at 192.040 kb on + strand, within MPMX26_00178at 192.103 kb on - strand, within MPMX26_00178at 192.140 kb on - strand, within MPMX26_00178at 192.140 kb on - strand, within MPMX26_00178at 192.140 kb on - strand, within MPMX26_00178at 192.140 kb on - strand, within MPMX26_00178at 192.140 kb on - strand, within MPMX26_00178at 192.140 kb on - strand, within MPMX26_00178at 192.142 kb on - strand, within MPMX26_00178at 192.178 kb on - strand, within MPMX26_00178at 192.178 kb on - strand, within MPMX26_00178at 192.311 kb on - strand, within MPMX26_00178at 192.311 kb on - strand, within MPMX26_00178at 192.332 kb on - strand, within MPMX26_00178at 192.339 kb on + strand, within MPMX26_00178at 192.342 kb on - strand, within MPMX26_00178at 192.344 kb on + strand, within MPMX26_00178at 192.361 kb on - strand, within MPMX26_00178at 192.397 kb on - strand, within MPMX26_00178at 192.424 kb on - strand, within MPMX26_00178at 192.435 kb on - strand, within MPMX26_00178at 192.442 kb on - strand, within MPMX26_00178at 192.452 kb on - strand, within MPMX26_00178at 192.452 kb on - strand, within MPMX26_00178at 192.457 kb on - strand, within MPMX26_00178

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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190,033 - -0.5
190,033 - -0.8
190,033 - +1.0
190,033 - -0.8
190,110 - +0.3
190,121 - +0.6
190,121 - +0.3
190,128 - +0.3
190,133 - +0.6
190,273 - MPMX26_00176 0.23 +0.4
190,279 - MPMX26_00176 0.24 +0.0
190,309 - MPMX26_00176 0.27 +0.2
190,311 - MPMX26_00176 0.28 -0.4
190,311 - MPMX26_00176 0.28 -0.3
190,311 - MPMX26_00176 0.28 +0.7
190,311 - MPMX26_00176 0.28 +0.7
190,316 - MPMX26_00176 0.28 +0.7
190,316 - MPMX26_00176 0.28 -0.4
190,321 - MPMX26_00176 0.29 -0.4
190,321 - MPMX26_00176 0.29 -0.1
190,321 - MPMX26_00176 0.29 +0.1
190,321 - MPMX26_00176 0.29 +0.2
190,321 - MPMX26_00176 0.29 -0.5
190,321 - MPMX26_00176 0.29 +0.5
190,321 - MPMX26_00176 0.29 -0.3
190,321 - MPMX26_00176 0.29 -0.5
190,321 - MPMX26_00176 0.29 +0.6
190,326 - MPMX26_00176 0.29 +0.2
190,326 - MPMX26_00176 0.29 +0.2
190,326 - MPMX26_00176 0.29 +0.5
190,326 - MPMX26_00176 0.29 -0.4
190,326 - MPMX26_00176 0.29 +0.3
190,326 - MPMX26_00176 0.29 -0.2
190,331 - MPMX26_00176 0.30 -0.8
190,331 - MPMX26_00176 0.30 +0.1
190,331 - MPMX26_00176 0.30 +1.5
190,331 - MPMX26_00176 0.30 +0.0
190,331 - MPMX26_00176 0.30 +0.5
190,331 - MPMX26_00176 0.30 +0.2
190,331 - MPMX26_00176 0.30 +0.2
190,331 - MPMX26_00176 0.30 -0.6
190,331 - MPMX26_00176 0.30 -0.2
190,331 - MPMX26_00176 0.30 +0.7
190,331 - MPMX26_00176 0.30 +0.0
190,336 - MPMX26_00176 0.31 +0.7
190,336 - MPMX26_00176 0.31 -0.2
190,336 - MPMX26_00176 0.31 +0.3
190,336 - MPMX26_00176 0.31 +0.1
190,336 - MPMX26_00176 0.31 +0.6
190,336 - MPMX26_00176 0.31 +0.4
190,336 - MPMX26_00176 0.31 +0.1
190,336 - MPMX26_00176 0.31 +0.4
190,378 - MPMX26_00176 0.36 -0.2
190,399 - MPMX26_00176 0.38 -1.4
190,407 - MPMX26_00176 0.39 -0.0
190,426 - MPMX26_00176 0.41 -0.1
190,428 - MPMX26_00176 0.41 +0.1
190,428 - MPMX26_00176 0.41 +0.0
190,447 - MPMX26_00176 0.44 +0.0
190,459 - MPMX26_00176 0.45 -0.2
190,498 - MPMX26_00176 0.50 -0.0
190,535 - MPMX26_00176 0.54 +0.2
190,535 - MPMX26_00176 0.54 +0.3
190,555 - MPMX26_00176 0.56 +0.1
190,555 - MPMX26_00176 0.56 +1.4
190,555 - MPMX26_00176 0.56 -0.8
190,555 - MPMX26_00176 0.56 -0.6
190,555 - MPMX26_00176 0.56 +0.7
190,611 - MPMX26_00176 0.63 -1.1
190,611 - MPMX26_00176 0.63 +0.1
190,611 - MPMX26_00176 0.63 -0.4
190,611 - MPMX26_00176 0.63 +0.2
190,611 - MPMX26_00176 0.63 +1.2
190,616 - MPMX26_00176 0.63 -0.1
190,655 - MPMX26_00176 0.68 +0.3
190,656 - MPMX26_00176 0.68 +0.1
190,757 - MPMX26_00176 0.80 +0.2
190,757 - MPMX26_00176 0.80 -0.1
190,757 - MPMX26_00176 0.80 +0.1
190,757 - MPMX26_00176 0.80 +0.0
190,757 - MPMX26_00176 0.80 +0.1
190,767 - MPMX26_00176 0.81 -0.9
190,767 - MPMX26_00176 0.81 +0.3
190,773 - MPMX26_00176 0.82 -0.2
190,773 - MPMX26_00176 0.82 +0.4
190,774 - MPMX26_00176 0.82 -0.6
190,783 - MPMX26_00176 0.83 +0.1
190,783 - MPMX26_00176 0.83 +0.0
190,783 - MPMX26_00176 0.83 -0.2
190,834 - MPMX26_00176 0.89 -2.4
190,836 - MPMX26_00176 0.89 +0.3
190,846 - -0.3
190,876 - -0.2
190,881 - +0.3
190,911 - +0.3
190,920 - -0.5
190,920 - -0.3
190,921 - +0.1
190,935 - +0.5
190,971 - -0.2
191,053 - MPMX26_00177 0.11 -1.8
191,053 - MPMX26_00177 0.11 -1.1
191,078 - MPMX26_00177 0.15 -1.1
191,078 - MPMX26_00177 0.15 -1.0
191,078 - MPMX26_00177 0.15 -1.4
191,078 - MPMX26_00177 0.15 -3.0
191,078 - MPMX26_00177 0.15 -3.0
191,078 - MPMX26_00177 0.15 -2.7
191,088 - MPMX26_00177 0.17 -1.3
191,094 - MPMX26_00177 0.18 -1.0
191,125 - MPMX26_00177 0.24 -0.6
191,130 - MPMX26_00177 0.25 -0.6
191,157 - MPMX26_00177 0.30 -2.2
191,177 - MPMX26_00177 0.34 -2.3
191,255 - MPMX26_00177 0.49 -0.8
191,255 - MPMX26_00177 0.49 -1.0
191,260 - MPMX26_00177 0.49 -0.8
191,260 - MPMX26_00177 0.49 -1.4
191,280 - MPMX26_00177 0.53 -2.1
191,292 - MPMX26_00177 0.55 -2.8
191,307 - MPMX26_00177 0.58 -3.3
191,354 - MPMX26_00177 0.67 -2.2
191,362 - MPMX26_00177 0.69 -0.8
191,396 - MPMX26_00177 0.75 -0.4
191,396 - MPMX26_00177 0.75 -2.2
191,401 - MPMX26_00177 0.76 -3.6
191,417 - MPMX26_00177 0.79 -2.2
191,419 - MPMX26_00177 0.79 -3.0
191,419 - MPMX26_00177 0.79 -1.9
191,422 - MPMX26_00177 0.80 -2.5
191,505 - -1.5
191,536 - -3.4
191,541 - -0.8
191,553 - -1.9
191,610 - +0.2
191,672 - +0.5
191,680 - +1.5
191,680 - -0.4
191,680 - +0.2
191,680 - -0.1
191,680 - +0.6
191,694 - +0.2
191,797 - +0.2
191,820 - +1.0
191,825 - MPMX26_00178 0.10 -0.2
191,851 - MPMX26_00178 0.14 -0.2
191,852 - MPMX26_00178 0.14 -0.2
191,852 - MPMX26_00178 0.14 +0.8
191,862 + MPMX26_00178 0.15 -0.4
191,883 + MPMX26_00178 0.18 -1.6
191,891 - MPMX26_00178 0.19 +0.2
191,891 - MPMX26_00178 0.19 -0.4
191,891 - MPMX26_00178 0.19 +0.5
191,896 - MPMX26_00178 0.19 +0.4
191,901 - MPMX26_00178 0.20 +0.6
191,901 - MPMX26_00178 0.20 -1.5
191,901 - MPMX26_00178 0.20 +0.6
191,906 - MPMX26_00178 0.20 +0.8
191,909 - MPMX26_00178 0.21 +0.0
191,956 - MPMX26_00178 0.27 -0.4
191,956 - MPMX26_00178 0.27 +0.1
191,956 - MPMX26_00178 0.27 -0.3
191,956 - MPMX26_00178 0.27 +0.5
191,956 - MPMX26_00178 0.27 +0.2
191,956 - MPMX26_00178 0.27 +0.0
191,956 - MPMX26_00178 0.27 +1.0
191,956 - MPMX26_00178 0.27 +0.1
191,956 - MPMX26_00178 0.27 +0.4
191,988 - MPMX26_00178 0.30 -0.8
191,988 - MPMX26_00178 0.30 -0.1
191,993 - MPMX26_00178 0.31 +0.3
191,993 - MPMX26_00178 0.31 -0.1
192,040 + MPMX26_00178 0.37 -0.5
192,040 + MPMX26_00178 0.37 -2.6
192,103 - MPMX26_00178 0.45 -0.2
192,140 - MPMX26_00178 0.49 -0.9
192,140 - MPMX26_00178 0.49 -0.3
192,140 - MPMX26_00178 0.49 -0.6
192,140 - MPMX26_00178 0.49 +0.1
192,140 - MPMX26_00178 0.49 -0.2
192,140 - MPMX26_00178 0.49 +0.7
192,142 - MPMX26_00178 0.50 -0.6
192,178 - MPMX26_00178 0.54 -0.6
192,178 - MPMX26_00178 0.54 -0.6
192,311 - MPMX26_00178 0.70 -1.2
192,311 - MPMX26_00178 0.70 -0.4
192,332 - MPMX26_00178 0.73 -0.8
192,339 + MPMX26_00178 0.74 -0.3
192,342 - MPMX26_00178 0.74 -2.4
192,344 + MPMX26_00178 0.74 +0.3
192,361 - MPMX26_00178 0.77 +0.5
192,397 - MPMX26_00178 0.81 +0.1
192,424 - MPMX26_00178 0.84 -0.3
192,435 - MPMX26_00178 0.86 -1.5
192,442 - MPMX26_00178 0.87 -0.5
192,452 - MPMX26_00178 0.88 +0.3
192,452 - MPMX26_00178 0.88 -0.0
192,457 - MPMX26_00178 0.88 -0.1

Or see this region's nucleotide sequence